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21281por Iomdina, Elena N., Tikhomirova, Natalya K., Bessmertny, Alexander M., Serebryakova, Marina V., Baksheeva, Viktoriia E., Zalevsky, Arthur O., Kotelin, Vladislav I., Kiseleva, Olga A., Kosakyan, Sbrui M., Zamyatnin, Andrey A., Philippov, Pavel P., Zernii, Evgeni Yu.“…The group of POAG-associated proteins was analyzed using Gene Ontology and genome-wide association study enrichment and protein–protein interaction network prediction. …”
Publicado 2020
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21282“…Three controlled genomic and proteomic resources like gene expression, Gene Ontology (GO), and protein-protein interaction network (PPIN) are utilized to build two independent views. …”
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21283“…A total of 390 copositive and 244 conegative correlation genes with SERINC2 were obtained from LGG in TCGA-LGG and GSE16011. Gene ontology (GO) category and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analyses showed that the copositive correlation genes were primarily enriched in the mitotic process and cell cycle. …”
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21284por Tong, Zhou, Yan, Cong, Dong, Yu-An, Yao, Ming, Zhang, Hangyu, Liu, Lulu, Zheng, Yi, Zhao, Peng, Wang, Yimin, Fang, Weijia, Zhang, Feifei, Jiang, Weiqin“…Protein-protein interaction (PPI) network and Gene Ontology (GO) analyses were used to analysis protein interactions and genomic alterations. …”
Publicado 2020
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21285por Wang, Yu, Zhang, Lin, Wu, Yun, Zhu, Rongping, Wang, Yan, Cao, Yan, Long, Wei, Ji, Chenbo, Wang, Huaiyan, You, Lianghui“…METHODS: We used tandem mass tag (TMT) labeling technology followed by tandem mass spectrometry to compare the peptidomic profile of preterm and term umbilical cord MSC (hUC-MSC) conditioned medium (CM). Gene Ontology (GO) enrichment analysis and ingenuity pathway analysis (IPA) were conducted to explore the differentially expressed peptides by predicting the functions of their precursor proteins. …”
Publicado 2020
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21286por Wu, Shuxian, Zhang, Jingru, Liu, Binghua, Huang, Yajuan, Li, Siping, Wen, Haishen, Zhang, Meizhao, Li, Jifang, Li, Yun, He, Feng“…Based on these relationships, functional annotation of the related lncRNAs was performed by gene ontology and Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment analysis. …”
Publicado 2020
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21287por Pathak, Gita A., Polimanti, Renato, Silzer, Talisa K., Wendt, Frank R., Chakraborty, Ranajit, Phillips, Nicole R.“…The genes identified via transcriptomics and copy number variation association were further investigated for enriched pathways and gene ontology. Some of the enriched processes were DNA repair, mitochondrial apoptosis regulation, cell-to-cell signaling interaction processes for renal and urological system, and organismal injury. …”
Publicado 2020
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21288por Wang, Lei, Li, Shuyan, Wang, Leilei, Lin, Kai, Du, Jialun, Miao, Wanhong, Zhang, Lei“…DAVID database and ClueGo plug-in software were used to carry out the gene ontology (GO) and KEGG enrichment analysis. The core signaling pathway network of “herb-ingredient-target” was constructed by the Cytoscape software. …”
Publicado 2020
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21289por Wang, Aili, Chao, Tianle, Ji, Zhibin, Xuan, Rong, Liu, Shuang, Guo, Maosen, Wang, Guizhi, Wang, Jianmin“…RESULTS: The results revealed 2,706, 2,525 and 52 DEGs between 1-month-old and 12-month-old goats, between 1-month-old and 24-month-old goats, and between 12-month-old and 24-month-old goats, respectively. Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) analyses indicated that most of the DEGs were enriched in immune- related GO terms and pathways. …”
Publicado 2020
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21290“…RESULTS: MiRNA profiling and sequencing identified 12 miRNAs and 10 mRNAs that were differentially expressed in metastatic tissues. Gene ontology and Pathway analyses determined that 3 differentially expressed mRNAs (ITGB3, TGFβ2 and TNC) were related to OC metastasis. …”
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21291por Pei, Jinli, Xiao, Zhengpan, Guo, Ziyi, Pei, Yechun, Wei, Shuangshuang, Wu, Hao, Wang, Dayong“…The intracellular concentrations of cAMP in H9C2 cells were tested by high performance liquid chromatography (HPLC) and the phosphorylation of JNK was tested by Western blot. RESULTS: Gene Ontology (GO) analysis revealed that the most significantly enriched processes in the domain of molecular function (MF) were catalytic activity and binding, whereas in the domain of biological processes (BP) were metabolic process and cellular process. …”
Publicado 2020
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21292por Laulajainen‐Hongisto, Anu, Lyly, Annina, Hanif, Tanzeela, Dhaygude, Kishor, Kankainen, Matti, Renkonen, Risto, Donner, Kati, Mattila, Pirkko, Jartti, Tuomas, Bousquet, Jean, Kauppi, Paula, Toppila‐Salmi, Sanna“…Of these, 76/170 (44%) showed bronchial epithelial protein expression in stained microscopic figures of Human Protein Atlas (HPA), and 61/170 (36%) had a literature report of having airway epithelial function. Gene ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) annotation analyses were performed, and 19 functional protein categories were found as significantly (p < 0.05) enriched among these genes. …”
Publicado 2020
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21293por Ricciardi, Luca, Giurato, Giorgio, Memoli, Domenico, Pietrafesa, Mariagrazia, Dal Col, Jessica, Salvato, Ilaria, Nigro, Annunziata, Vatrella, Alessandro, Caramori, Gaetano, Casolaro, Vincenzo, Stellato, Cristiana“…DNA sequence motifs were searched using PScan-ChIP. Gene Ontology (GO) was performed with Ingenuity Pathway Analysis (IPA) tool. …”
Publicado 2020
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21294por Torres Silva, Ever Augusto, Uribe, Sebastian, Smith, Jack, Luna Gomez, Ivan Felipe, Florez-Arango, Jose Fernando“…For this component of the design task, we used a work ontology analysis of the CPGs for antenatal care in our particular target clinical settings. …”
Publicado 2020
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21295por Lu, Cheng, Bera, Kaustav, Wang, Xiangxue, Prasanna, Prateek, Xu, Jun, Janowczyk, Andrew, Beig, Niha, Yang, Michael, Fu, Pingfu, Lewis, James, Choi, Humberto, Schmid, Ralph A, Berezowska, Sabina, Schalper, Kurt, Rimm, David, Velcheti, Vamsidhar, Madabhushi, Anant“…We did a gene set enrichment and Gene Ontology analysis on 405 patients to identify associations with differentially expressed biological pathways implicated in lung cancer pathogenesis. …”
Publicado 2020
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21296por Zhu, Zheng, Lan, Yang, Wang, Lihong, Ge, Jia, Wang, Jiao, Liu, Feng, He, Zhicheng, Zhang, Hua, Luo, Min, Lin, Dandan, Tan, Yaoyao, Xu, Yuanyuan, Luo, Tao“…Enrichment map and Gene Ontology analysis demonstrated that signaling pathways related to the cell cycle were enriched in the NTRS(High) group. …”
Publicado 2020
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21297por Mueller, Ralf C., Mallig, Nicolai, Smith, Jacqueline, Eöery, Lél, Kuo, Richard I., Kraus, Robert H. S.“…CONSTRUCTION AND CONTENT: A relational database with avian immune gene evidence from Gene Ontology, Ensembl, UniProt and the B10K consortium has been designed and set up. …”
Publicado 2020
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21298por Zhu, Qian, Nguyen, Dac-Trung, Grishagin, Ivan, Southall, Noel, Sid, Eric, Pariser, Anne“…RESULTS: We developed a meta-ontology based integrative knowledge graph for rare diseases in Neo4j. …”
Publicado 2020
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21299por Keller, Maria, Yaskolka Meir, Anat, Bernhart, Stephan H., Gepner, Yftach, Shelef, Ilan, Schwarzfuchs, Dan, Tsaban, Gal, Zelicha, Hila, Hopp, Lydia, Müller, Luise, Rohde, Kerstin, Böttcher, Yvonne, Stadler, Peter F., Stumvoll, Michael, Blüher, Matthias, Kovacs, Peter, Shai, Iris“…P < 1 × 10(−5)). Gene ontology analysis indicated that biological processes such as cell adhesion and molecular functions such as calcium ion binding could have an important role in determining the success of interventional therapies in obesity. …”
Publicado 2020
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21300por Dai, Hanying, Guo, Lihuang, Lin, Mingyue, Cheng, Zhenbo, Li, Jiancheng, Tang, Jinxia, Huan, Xisha, Huang, Yue, Xu, Keqian“…Subsequently, we analyzed the gene ontology (GO) function and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway of the DEGs, and constructed a protein-protein interaction (PPI) network. …”
Publicado 2020
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