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  1. 22581
    por Vissio, Gabriele
    Publicado 2020
    “…According to Canguilhem, vitalism is not a metaphysical or ontological theory, but rather a general attitude or a perspective about life and living beings, both understood employing the axiological concept of ‘normativity’. …”
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    Reasoning in Life: Values and Normativity in Georges Canguilhem
  2. 22582
    “…However, progress in the metabolomic community has seemed to falter recently, and whereas there are ontologies to describe the metadata for metabolomics there are still no central repositories for the datasets themselves. …”
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    So what have data standards ever done for us? The view from metabolomics
  3. 22583
    por van Driel, Marc A, Brunner, Han G
    Publicado 2006
    “…Such in silico prioritisation methods may further improve by completion of datasets, by development of standardised ontologies across databases and species and, ultimately, by the integration of different strategies.…”
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    Bioinformatics methods for identifying candidate disease genes
  4. 22584
    “…The hotspots provide a view beyond the commonly used metabolic pathways and gene ontologies. Availability: http://www.win.tue.nl/∼mwestenb/spotxplore/ Contact: m.a.westenberg@tue.nl Supplementary information: Example data and user manual are available at SpotXplore's web site.…”
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    SpotXplore: a Cytoscape plugin for visual exploration of hotspot expression in gene regulatory networks
  5. 22585
    “…The database is divided into three sub-schemas corresponding to the species of interest: wheat, barley and rice; each sub-schema is then divided into two sub-ontologies, regarding genotypic and phenotypic data, respectively. …”
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    A genotypic and phenotypic information source for marker-assisted selection of cereals: the CEREALAB database
  6. 22586
    “…Participants reported an ongoing sense of ontological uncertainty characterized by lack of control over their condition and treatment. …”
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    ‘It’s been a long haul, a big haul, but we’ve made it’: hepatitis C virus treatment in post-transplant patients with virus recurrence: An interpretative phenomenological analysis
  7. 22587
    “…SUMMARY: Gilda is a software tool and web service that implements a scored string matching algorithm for names and synonyms across entries in biomedical ontologies covering genes, proteins (and their families and complexes), small molecules, biological processes and diseases. …”
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    Gilda: biomedical entity text normalization with machine-learned disambiguation as a service
  8. 22588
    por Kinnvall, Catarina
    Publicado 2023
    “…This involves a close engagement with crisis and crisis narratives in relation to ontological insecurity and anxiety; how such crisis narratives have materialised in fantasies related to borders and corona nationalism, and the emotional governance of these particular fantasies in the hands of populist leaders and their increasingly receptive audiences.…”
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    Covid-19: crisis, emotional governance and populist fantasy narratives
  9. 22589
    “…Unexpectedly, lines selected using EGFR-targeting antibodies overexpress different gene ontologies from ones selected using kinase inhibitors. …”
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    Transcriptional changes associated with resistance to inhibitors of epidermal growth factor receptor revealed using metaanalysis
  10. 22590
    “…METHODS: Since existing supervised approaches require a large amount of manually-labeled training data, which is currently unavailable for the life science domain, we propose a novel unsupervised collective inference approach to link entities from unstructured full texts of biomedical literature to 300 ontologies. The approach leverages the rich semantic information and structures in ontologies for similarity computation and entity ranking. …”
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    Entity linking for biomedical literature
  11. 22591
    “…Statistical analyses were performed using National Institute of Aging array analysis tool; group comparisons were made using ANOVA, and gene ontologies were identified using software available on the Web. …”
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    Genome-Wide Scleral Micro- and Messenger-RNA Regulation During Myopia Development in the Mouse
  12. 22592
    “…Towards this, we first built a heterogeneous network consisting of ontological associations as well as curated associations involving genes, diseases, phenotypes and pathways from multiple sources. …”
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    Phenotype-driven gene prioritization for rare diseases using graph convolution on heterogeneous networks
  13. 22593
    “…Ontological data for plants and samples of trees and shrubs were used as the dataset to demonstrate how plant-based data could be integrated into the proposed data visualisation. …”
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    Plant data visualisation using network graphs
  14. 22594
    “…We start from the hypothesis, that entity relationship and object models useful for software development can picture domain expertise, similar as domain ontologies, and encourage a discussion of scientific information systems on modeling level. …”
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    Modeling Crop Genetic Resources Phenotyping Information Systems
  15. 22595
    “…The meaning of the term ‘abdomen’ has become increasingly ambiguous, as it has to satisfy the contemporary requirements of natural language discourse, literature, gross and radiological anatomy and its role in ontologies supporting electronic records and data modelling. …”
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    What is the abdomen? Rationalising clinical and anatomical perspectives using formal semantics
  16. 22596
    por Kim, Sunghwan
    Publicado 2021
    “…Basic Protocol 7: Finding compounds annotated with classifications or ontological terms Basic Protocol 8: Finding stereoisomers and isotopomers of a compound through identity search…”
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    Exploring Chemical Information in PubChem
  17. 22597
    “…Finally, we note that differences in AMR ontologies and observed variance of all tools in classification outputs call for further development on standardization of benchmarking data and protocols. …”
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    AMR-meta: a k-mer and metafeature approach to classify antimicrobial resistance from high-throughput short-read metagenomics data
  18. 22598
    “…We identified 10 major hub proteins (FPR2, TNF, CXCL8, CXCL1, IL1B, VEGFA, CYBB, PTGS2, ITGAX, and CCR5), 12 significant functional pathways, and 11 gene ontological pathways that are associated with CVD. We also found the connection of CVD with its risk factors in the gold benchmark databases. …”
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    Bioinformatics and System Biological Approaches for the Identification of Genetic Risk Factors in the Progression of Cardiovascular Disease
  19. 22599
    por RENDÓN ROJAS, MIGUEL ÁNGEL
    Publicado 1994
    “…THE FIRST ONE POSITS A REALISTIC ONTOLOGICAL STA US AS STARTING POINT AND THEGNOSEOLOGICAL, ANTHROPOLOGICAL, ETHICAL AND AXIOLOGICAL PROBLEMS TO BE SOLVED. …”
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    Las tareas de la fundamentación de la bibliotecología
  20. 22600
    “…Recent enhancements to ZFIN include (i) comprehensive curation of gene expression data from the literature and from directly submitted data, (ii) increased support and annotation of the genome sequence, (iii) expanded use of ontologies to support curation and query forms, (iv) curation of morpholino data from the literature, and (v) increased versatility of gene pages, with new data types, links and analysis tools.…”
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    The Zebrafish Information Network: the zebrafish model organism database
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