“…Due to the lack of annotation of the functional genome and ontologies of genes, our knowledge about the various biological systems that contribute to the development of external phenotypes is sparse. …”
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“…The EST data can also be retrieved based on Pfam domains, Cluster of Orthologous Groups (COG) and Gene Ontologies (GO) assigned to them by similarity searches. …”
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“…Controlled vocabularies for gene and plant ontologies, as well as interconnecting links to physical or genetic map and other genomic data in PlantGDB, Gramene and GrainGenes, allow users to perform EST alignments and gene function prediction using Barley1 exemplar sequences, thus, enhancing cross-species comparison.…”
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“…In the paper I use the term "cohere" to describe the logic of animal patenting that emerged with, and was essential to, the outcome in each jurisdiction. I describe an ontological politics of connecting and separating different ways of being mouse, as the oncomouse's genetic modification, risks, benefits, and suffering were juxtaposed with patent law, precedent, laboratory protocols, and understandings of human agency and control. …”
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“…This makes naming difficult and impacts any downstream analysis such as associating gene ontologies, mapping affected pathways or simply validating expression changes. …”
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“…This statistical disparity is normally positioned an objective, ontological and undeniable social fact, a fact best explained as a function of endemic community disadvantage and disenfranchisement. …”
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“…The proposed framework ontologically expresses the knowledge required for the task-oriented dialog system’s process and can build a dialog system by editing the dialog knowledge. …”
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“…By building on new materialist philosophy and reproductive justice critiques of consumer choice, I consider both social and ontological problems with a politics based on individual agents. …”
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“…In this open and collaborative network, RSUs and vehicles use ontologies to semantically represent information and facilitate the development of intelligent autonomous agents capable of navigating and processing the shared data. …”
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“…Natural language patterns allow for the reduction of intermediate abstraction layers to map physical domain concepts into executable code avoiding the recourse to ontologies, which would need to be shared, kept up to date, and synchronized across a set of devices. …”
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“…This resilience augmenting solution is based on the deep modeling of the functional architecture of the autonomous robot in combination with ontological reasoning to allow self-diagnosis and reconfiguration during operation. …”
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“…We show that dosage-based dependent predictors (DDPs) primarily belonged to transcriptional regulation ontologies. We also found that anti-sense RNAs and long- noncoding RNA transcripts display DDPs. …”
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“…The current paper outlines a semiotic, embodied and psychoanalytic conceptualization of psychopathology – the Phase Space of Meaning (PSM) model – aimed at providing ontological grounds to the p factor hypothesis. Framed within a more general model of how the mind works, the PSM model maintains that the p factor can be conceived as the empirical marker of the degree of rigidity of the meaning-maker’s way of interpreting experience, namely of the dimensions of meanings used to map the environment’s variability. …”
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“…This research finds this system to rest upon a foundation of three forms of fear: ontological (the normalisation of fear), epistemological (the utilisation of fear to shape knowledge) and axiological (the influence of fear on acceptability). …”
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“…Neural methods were largely outperformed by more traditional nonneural methods, given the characteristics of the data set. Ontological rules were also effective in tasks such as baseline characteristics (alcoholism, atrial fibrillation, and coronary artery disease) and the Rankin scale. …”
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“…A commonly held background assumption about the sciences is that they connect along borders characterized by ontological or explanatory relationships, usually given in the order of mathematics, physics, chemistry, biology, psychology, and the social sciences. …”
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“…A critical realism ontological paradigm with contextualism epistemology guided the Reflexive Thematic Analysis. …”
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“…In the Animal Quantitative Trait Loci Database and the Animal Trait Correlation Database, we have recently introduced a new method to extend livestock trait ontologies by using trait modifiers and qualifiers to define traits that differ slightly in how they are measured, examined or combined with other traits or factors. …”
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“…Although this account may prima facie appear to ultimately rely on epistemic considerations, I show that it can be used to vindicate the emergence of individuals in a quasi-ontological sense. To this end, I discuss a recent account of evolutionary transitions in individuality proposed by Godfrey-Smith and Kerr (Brit J Philos Sci 64(1):205–222, 2013) where a transition occurs through several stages, each with an accompanying model. …”
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“…Sequence function description is integrated with the Gene Ontologies and the Enzyme Commission identifiers for a standard classification of gene products and for the mapping of the expressed sequences onto metabolic pathways. …”
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