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  1. 1201
    “…Knowledge representation for the contributed ontology is performed by using Web Ontology Language (OWL), a semantic web language designed to represent rich and complex knowledge about things, groups of things, and relations between things. …”
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    Web Ontologies to Categorialy Structure Reality: Representations of Human Emotional, Cognitive, and Motivational Processes
  2. 1202
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    Erratum to: Towards exergaming commons: composing the exergame ontology for publishing open game data
  3. 1203
    “…We have designed an ontology of venom-related concepts — named Venom Ontology — that reuses an existing public data source: UniProt’s Tox-Prot database. …”
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    Using a Novel Ontology to Inform the Discovery of Therapeutic Peptides from Animal Venoms
  4. 1204
    “…To facilitate the exchange of information between the different applications that use sensor data, a common framework of knowledge is needed to allow interoperability. In this paper an ontology-driven architecture to improve the driving environment through a traffic sensor network is proposed. …”
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    Ontology-Based Architecture for Intelligent Transportation Systems Using a Traffic Sensor Network
  5. 1205
    “…BACKGROUND: Gene Ontology (GO) terms represent the standard for annotation and representation of molecular functions, biological processes and cellular compartments, but a large gap exists between the way concepts are represented in the ontology and how they are expressed in natural language text. …”
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    Gene Ontology synonym generation rules lead to increased performance in biomedical concept recognition
  6. 1206
    por Stephens, Neil, Ruivenkamp, Martin
    Publicado 2016
    “…The analysis of individual images and the collection of images about a certain object or subject—known as the imagescape—is a productive approach to understanding the ontology and promise of IVM and is applicable to other areas of social life.…”
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    Promise and Ontological Ambiguity in the In vitro Meat Imagescape: From Laboratory Myotubes to the Cultured Burger
  7. 1207
    “…Of the 4550 differently expressed genes, 948 exhibited differential expression due to treatment within line or lines under freezing condition. Analysis of gene ontology found that these 948 genes were significantly enriched for binding functions (DNA binding, ATP binding, and metal ion binding), protein kinase activity, and peptidase activity. …”
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    Transcriptome Sequencing Identified Genes and Gene Ontologies Associated with Early Freezing Tolerance in Maize
  8. 1208
    “…In this study, we investigated which gene ontology (GO) terms and biological pathways were highly related to the determination of drug half-life. …”
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    The Use of Gene Ontology Term and KEGG Pathway Enrichment for Analysis of Drug Half-Life
  9. 1209
    “…RESULTS: We have developed the Flora Phenotype Ontology (FLOPO), an ontology for describing traits of plant species found in Floras. …”
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    The flora phenotype ontology (FLOPO): tool for integrating morphological traits and phenotypes of vascular plants
  10. 1210
    “…The modularisation strategy is designed to facilitate ontology development, maintenance, and reuse. The domain-specific modules formalised in the Web Ontology Language (OWL) integrate the domain-specific sets of rules formalised in the Semantic Web Rule Language (SWRL). …”
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    Modularising ontology and designing inference patterns to personalise health condition assessment: the case of obesity
  11. 1211
    por Lan, Chaowang, Chen, Qingfeng, Li, Jinyan
    Publicado 2016
    “…RESULTS: We define a novel information content of gene ontology (GO) to measure similarity between two sets of GO graphs corresponding to the two sets of target genes of two miRNAs. …”
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    Grouping miRNAs of similar functions via weighted information content of gene ontology
  12. 1212
    “…Gene Ontology (GO) classification of statistically significantly differentially expressed genes is commonly used to interpret transcriptomics data as a part of functional genomic analysis. …”
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    A novel hypothesis-unbiased method for Gene Ontology enrichment based on transcriptome data
  13. 1213
    “…We chose a popular biomedical ontology, the Human Phenotype Ontology (HPO), to test our solution to the vocabulary problem. …”
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    Ontology-Driven Search and Triage: Design of a Web-Based Visual Interface for MEDLINE
  14. 1214
    “…The Interaction Network Ontology (INO) includes a hierarchy of various interaction-related keywords useful for literature mining. …”
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    Ontology-based literature mining of E. coli vaccine-associated gene interaction networks
  15. 1215
    “…With the well-defined structure and manual curation, Gene Ontology (GO) is the most frequently used vocabulary for representing gene functions. …”
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    NaviGO: interactive tool for visualization and functional similarity and coherence analysis with gene ontology
  16. 1216
    por Bennett, Brian D., Bushel, Pierre R.
    Publicado 2017
    “…BACKGROUND: Over-representation analysis (ORA) detects enrichment of genes within biological categories. Gene Ontology (GO) domains are commonly used for gene/gene-product annotation. …”
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    goSTAG: gene ontology subtrees to tag and annotate genes within a set
  17. 1217
    “…The integration process is accommodated by biomedical ontologies, a set of standardized vocabularies that define terms and logical relationships between them in each vocabulary. …”
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    Use of Biomedical Ontologies for Integration of Biological Knowledge for Learning and Prediction of Adverse Drug Reactions
  18. 1218
    “…An internal structure of the ontology was designed using the entity-attribute-value (EAV) triplet data model, and superclasses of the ontology were aligned with the upper ontology. …”
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    Ontology-Based Approach to Social Data Sentiment Analysis: Detection of Adolescent Depression Signals
  19. 1219
    “…Here, we present MorphDB, a resource where MORPH-based candidate genes for large-scale functional annotations (Gene Ontology, MapMan bins) are integrated across multiple plant species. …”
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    MorphDB: Prioritizing Genes for Specialized Metabolism Pathways and Gene Ontology Categories in Plants
  20. 1220
    por Köhler, Sebastian
    Publicado 2018
    “…A typical use case of ontologies is the calculation of similarity scores between items that are annotated with classes of the ontology. …”
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    Improved ontology-based similarity calculations using a study-wise annotation model
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