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18441por Sulayman, Ablat, Tian, Kechuan, Huang, Xixia, Tian, Yuezhen, Xu, Xinming, Fu, Xuefeng, Zhao, Bingru, Wu, Weiwei, Wang, Dan, Yasin, Aynur, Tulafu, Hanikezi“…Differentially expressed lncRNAs were grouped into 10 clusters based on their expression pattern by K-means clustering. Moreover, Gene Ontology (GO) annotation and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analyses showed that some differentially expressed mRNAs, such as DKK1, DSG4, FOXE1, Hoxc13, SFRP1, SFRP2, and Wnt10A overlapped with lncRNAs targets, and enriched in important hair follicle developmental pathways, including Wnt, TNF, and MAPK signaling pathways. …”
Publicado 2019
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18442“…The possible pathways were predicted using Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) analysis. …”
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18443por Fitzek, Elisabeth, Orton, Lauren, Entwistle, Sarah, Grayburn, W. Scott, Ausland, Catherine, Duvall, Melvin R., Yin, Yanbin“…Different OGC groups were subjected to a Gene Ontology (GO) enrichment analysis with the Chl+Cha+Emb group (including 5,031 OGCs found in Chl and Cha and Emb) as the control. …”
Publicado 2019
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18444Integrated analysis of long non-coding RNA and mRNA expression in different colored skin of koi carp“…To further reveal their potential functions, Gene Ontology (GO) terms and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathways were analyzed, and membrane, pigment cell development, cAMP signaling, melanogenesis and tyrosine metabolism appear to affect skin pigmentation. …”
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18445por Liao, Jingqiu, Orsi, Renato Hohl, Carroll, Laura M., Kovac, Jasna, Ou, Hongyu, Zhang, Hailong, Wiedmann, Martin“…Dublin showed evidence for a recent population bottleneck, and the genomes were characterized by a larger number of genes and gene ontology terms specifically absent from this serotype and a significantly higher number of pseudogenes as compared to other two serotypes. …”
Publicado 2019
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18446por López‐Mejías, Raquel, Carmona, F. David, Genre, Fernanda, Remuzgo‐Martínez, Sara, González‐Juanatey, Carlos, Corrales, Alfonso, Vicente, Esther F., Pulito‐Cueto, Verónica, Miranda‐Filloy, José A., Ramírez Huaranga, Marco A., Blanco, Ricardo, Robustillo‐Villarino, Montserrat, Rodríguez‐Carrio, Javier, Alperi‐López, Mercedes, Alegre‐Sancho, Juan J., Mijares, Verónica, Lera‐Gómez, Leticia, Pérez‐Pampín, Eva, González, Antonio, Ortega‐Castro, Rafaela, López‐Pedrera, Chary, García Vivar, Mari L., Gómez‐Arango, Catalina, Raya, Enrique, Narvaez, Javier, Balsa, Alejandro, López‐Longo, Francisco J., Carreira, Patricia, González‐Álvaro, Isidoro, Rodríguez‐Rodríguez, Luis, Fernández‐Gutiérrez, Benjamín, Ferraz‐Amaro, Iván, Gualillo, Oreste, Castañeda, Santos, Martín, Javier, Llorca, Javier, González‐Gay, Miguel A.“…In addition, biologic pathway enrichment and predictive protein–protein relationship analyses, including suggestive GWAS signals of potential relevance, revealed a functional enrichment of the collagen biosynthesis network related to the presence/absence of carotid plaques (Gene Ontology no. 0032964; false discovery rate–adjusted P = 4.01 × 10(−3)). …”
Publicado 2019
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18447por Elabed, Hamouda, González-Tortuero, Enrique, Ibacache-Quiroga, Claudia, Bakhrouf, Amina, Johnston, Paul, Gaddour, Kamel, Blázquez, Jesús, Rodríguez-Rojas, Alexandro“…Based on a collection of single-gene knockout mutants and gene ontology analysis, we suggest that the adaptive response in P. aeruginosa to hyper-salinity relies on multiple gene product interactions. …”
Publicado 2019
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18448por Lu, Cui-Ling, Yan, Zhi-Qiang, Song, Xue-Ling, Xu, Yang-Ying, Zheng, Xiao-Ying, Li, Rong, Liu, Ping, Feng, Huai-Liang, Qiao, Jie“…RESULTS: A total of 715 genes were up-regulated, and 287 genes were down-regulated, in the Gn-stimulated group relative to the control group. Gene Ontology analysis revealed that the down-regulated genes were enriched in cell cycle and meiosis pathways, primarily those associated with follicle or oocyte maturation and quality. …”
Publicado 2019
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18449por Zhao, Yang, Hu, Fangxiu, Zhang, Xingen, Wei, Qiye, Dong, Jinlei, Bo, Chen, Cheng, Beijiu, Ma, Qing“…RESULTS: Through performing nine pairwise comparisons, the maximum number of differentially expressed genes (DEGs) was detected between the two parental lines, and the minimum number was identified between the F(1) hybrid and the paternal lines under both conditions, which suggested greater genetic contribution of the paternal line to heat stress tolerance. Gene Ontology (GO) enrichment analysis of the 4518 common DEGs indicated that GO terms associated with diverse stress responses and photosynthesis were highly overrepresented in the 76 significant terms of the biological process category. …”
Publicado 2019
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18450“…The differentially expressed circRNAs were obtained through RNA sequencing. Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) analyses were further performed to uncover the key function and pathways in pulmonary fibrosis. …”
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18451por Vomhof-DeKrey, Emilie E., Lee, Jun, Lansing, Jack, Brown, Chris, Darland, Diane, Basson, Marc D.“…RNA sequencing performed on intestinal mucosa of Slfn3KO and WT mice showed gene ontology decreases in cell adhesion molecule signaling, tumor necrosis factor receptor binding, and adaptive immune cell proliferation/functioning genes in Slfn3KO mice, with greater effects in females. qPCR analysis of fatty acid metabolism genes, Pla2g4c, Pla2g2f, and Cyp3c55 revealed an increase in Pla2g4c, and a decrease in Pla2g2f in Slfn3KO females. …”
Publicado 2019
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18452por T'Joen, Veronique, Vaneeckhaute, Lieven, Priem, Sara, Van Woensel, Steven, Bekaert, Sofie, Berneel, Elke, Van Der Straeten, Catherine“…Known standards, reference lists and ontologies (such as ICD-10-CM, animal taxonomy, cell line ontology…) were considered. …”
Publicado 2019
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18453por Pozuelos, Giovanna L., Kagda, Meenakshi S., Schick, Suzaynn, Girke, Thomas, Volz, David C., Talbot, Prue“…A total of 389 differentially expressed genes were identified in nasal epithelium exposed to THS, while only 2 genes, which were not studied further, were affected by clean air. Enriched gene ontology terms associated with stress-induced mitochondrial hyperfusion were identified, such as respiratory electron transport chain (q = 2.84 × 10(−3)) and mitochondrial inner membrane (q = 7.21 × 10(−6)). …”
Publicado 2019
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18454por Tu, Junxue, Chen, Jingjing, He, Meimei, Tong, Hongfei, Liu, Haibin, Zhou, Bin, Liao, Yi, Wang, Zhaohong“…Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway and gene ontology (GO) enrichment analysis performed database for Integrated Discovery, Visualization and Annotation. …”
Publicado 2019
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18455por Zucchelli, Silvia, Fedele, Stefania, Vatta, Paolo, Calligaris, Raffaella, Heutink, Peter, Rizzu, Patrizia, Itoh, Masayoshi, Persichetti, Francesca, Santoro, Claudio, Kawaji, Hideya, Lassmann, Timo, Hayashizaki, Yoshihide, Carninci, Piero, Forrest, Alistair R. R., Gustincich, Stefano“…Intersection with GWAS studies, sample ontology, and dynamic expression reveals association to specific genetic traits as well as cell and tissue types, not limited to neurodegenerative diseases. …”
Publicado 2019
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18456“…We identified 1093 up-regulated and 845 down-regulated mRNAs in IBV-infected avian DCs. Gene Ontology analysis suggested that cellular macromolecule and protein location (GO-BP) and transcription factor binding (GO-MF) were abundant in IBV-stimulated avian DCs. …”
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18457“…These differentially expressed genes (DEGs) were mainly enriched in extracellular space and extracellular region based on Gene Ontology (GO) enrichment analysis and in the pathways of two-component system, cell adhesion molecules, steroid hormone biosynthesis and neuroactive ligand-receptor interaction based on Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment analysis. …”
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18458por Yin, Fu-Fen, Zhao, Li-Jun, Ji, Xiao-Yu, Duan, Ning, Wang, Yan-Kui, Zhou, Jing-Yi, Wei, Li-Hui, He, Xiang-Jun, Wang, Jian-Liu, Li, Xiao-Ping“…There were differentially expressed genes between PE and P-M and between RPE and P-RE, of which gene ontology and Kyoto Encyclopedia of Genes and Genomes analysis were mainly enriched in cell proliferation, the p53 signaling pathway, etc. …”
Publicado 2019
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18459“…The differentially expressed genes (DEGs) between metastatic samples and non-metastatic samples were screened, followed by gene co-expression network construction, and Gene Ontology function and Kyoto Encyclopedia of Genes and Genomes pathway analyses. …”
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18460“…Differentially expressed genes (DEGs) between CRC and normal samples were screened by integrated analysis of gene expression profile datasets, including the Gene Expression Omnibus (GEO) and The Cancer Genome Atlas. Gene ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analysis was conducted to identify the biological role of DEGs. …”
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