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18661por Chen, Peng-Yu, Li, Xiao-Dong, Ma, Wei-Ning, Li, Han, Li, Miao-Miao, Yang, Xin-Yu, Li, Shao-Yi“…There were no overlapping gene in ontology (GO) terms related to GBM recurrence in the TCGA and CGGA databases, but there were overlaps associated with LGG recurrence. …”
Publicado 2020
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18662por Zhang, Lijie, Makamure, Joyman, Zhao, Dan, Liu, Yiming, Guo, Xiaopeng, Zheng, Chuansheng, Liang, Bin“…The expression profiles of the GSE121248 dataset were downloaded from the Gene Expression Omnibus database and the differentially expressed genes (DEGs) were identified. Gene Ontology (GO) and Kyoto Encyclopedia of Gene and Genome (KEGG) analyses were performed by using the Database for Annotation, Visualization and Integrated Discovery. …”
Publicado 2020
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18663“…Healthcare simulation setting reliability is not directly defined but described as errors introduced by the interactions between simulation design attributes and tasks performed by simulated participants. Based on the ontology of simulation’s design attributes believed to introduce setting errors, lexical terms related to reliability suggest how simulated participants are trained to refine or maintain their performance tasks that aim to mitigate errors. …”
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18664por Liu, Chaojun, Zhang, Zhen, Ping, Yu, Qin, Guohui, Zhang, Kai, Maimela, Nomathamsanqa Resegofetse, Huang, Lan, Yang, Shengli, Zhang, Yi“…We analyzed the expression profile of PDCD1 (encoding PD-1) according to the different grade, isocitrate dehydrogenase (IDH) mutation status, and molecular subtype of glioblastoma. Gene ontology (GO) analyses were performed to explore biological processes of PD-1-related genes. …”
Publicado 2020
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18665por Chen, Shuyi, Chen, Yimin, Zhu, Zhiguo, Tan, Huo, Lu, Jielun, Qin, Pengfei, Xu, Lihua“…EdgeR of R platform was applied to identify the differentially expressed genes and miRNAs (DEGs, DE-miRNAs). Gene ontology (GO) and the Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment analyses were performed by Metascape and DAVID. …”
Publicado 2020
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18666por Han, Bao-Ai, Yang, Xiu-Ping, Hosseini, Davood K, Zhang, Po, Zhang, Ya, Yu, Jin-Tao, Chen, Shan, Zhang, Fan, Zhou, Tao, Sun, Hai-Ying“…The David database was then used to perform Gene ontology (GO) analysis and Kyoto Encyclopedia of Gene and Genome pathway enrichment analyses on selected genes. …”
Publicado 2020
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18667“…Coexpressed genes for PD-1, PD-L1, and PD-L2 were selected by correlation analysis and confirmed by STRING. Gene Ontology and KEGG pathway analyses were performed by clusterProfiler. …”
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18668por Zheng, Yuxuan, Merchant, Michael L., Burke, Tom J., Ritzenthaler, Jeffrey D., Li, Ming, Gaweda, Adam E., Benz, Frederick W., Roman, Jesse, Watson, Walter H.“…Ingenuity Pathway Analysis (IPA) showed that age-dependent Slc7a11-responsive proteins were involved in pathways of protein translation initiation, ubiquitin-proteasome-mediated degradation, and integrin-cytoskeleton-associated signaling. Gene ontology analysis showed cell adhesion, protein translation, and organization of actin cytoskeleton were among the top enriched terms for biological process. …”
Publicado 2020
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18669por Karim, Ahmad Faisal, Soltis, Anthony R., Sukumar, Gauthaman, Königs, Christoph, Ewing, Nadia P., Dalgard, Clifton L., Wilkerson, Matthew D., Pratt, Kathleen P.“…Interestingly, gene ontology enrichments featured innate immune modulators, including NLRP3, TLR8, IL32, CLEC10A, and COLEC12. …”
Publicado 2020
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18670“…GeneCoDis3 was used to perform Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) functional enrichment analysis on genes in the PPI network. …”
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18671“…Last, PPI networks analysis, Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) analysis revealed several potential mechanisms of four hub genes and their co-operators participating in OvCa progression. …”
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18672por Shui, Xiaolong, Xie, Qipeng, Chen, Shaomin, Zhou, Chengwei, Kong, Jianzhong, Wang, Yi“…Thus, we further explored the function of NONHSAG034351‐related genes in the network. Gene Ontology (GO) enrichment and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analysis showed that NONHSAG034351‐associated genes are involved in the response to lipopolysaccharide, angiogenesis, tumour necrosis factor (TNF) signalling, and mitogen‐activated protein kinase (MAPK) signalling pathways. …”
Publicado 2020
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18673por Gao, Shanshan, Zhang, Kunpeng, Wei, Luting, Wei, Guanyun, Xiong, Wenfeng, Lu, Yaoyao, Zhang, Yonglei, Gao, Aoxiang, Li, Bin“…Further, 758 genes were differentially expressed between EO treated and control samples. Based on Gene Ontology (GO) analysis, numerous differentially expressed genes (DEGs) were enriched for terms related to the regulation of biological processes, response to stimulus, and antigen processing and presentation. …”
Publicado 2020
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18674por Nocelli, Cristina, Cappelli, Katia, Capomaccio, Stefano, Pascucci, Luisa, Mercati, Francesca, Pazzaglia, Irene, Mecocci, Samanta, Antonini, Marco, Renieri, Carlo“…RESULTS: To better describe goat’s hair follicle transcriptome we applied RNA-sequencing to isolated hair follicles from five Italian cashmere goats, during the anagen and catagen phase, identifying total of 214 differentially expressed genes (DEGs): 97 were up-regulated while 117 were down-regulated in catagen with respect to anagen. Gene Ontology and pathway analysis were performed. We detected 144 significant pathways spanning from estrogen, pluripotency of stem cells, thermogenesis and fatty acid metabolism that were strongly expressed during the hair follicle phases analysed. …”
Publicado 2020
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18675“…Subsequently, the Metascape database was utilized to conduct the enrichment of Gene Ontology biological processes and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathways. …”
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18676“…METHODS: Four genomics profiling datasets were used to identify MDEGs. Gene Ontology enrichment and Kyoto Encyclopaedia of Genes and Genomes pathway enrichment analysis were used to explore the biological roles of MDEGs in GC. …”
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18677por Bi, Ningrui, Sun, Yuanmei, Lei, Shan, Zeng, Zhirui, Zhang, Yan, Sun, Chengyi, Yu, Chao“…Hub genes in the significant modules were selected following Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment analyses, and from constructing a protein-protein interaction (PPI) network. …”
Publicado 2020
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18678por Luo, Xizi, Pan, Jiahui, Meng, Qingyu, Huang, Juanjuan, Wang, Wenfang, Zhang, Nan, Wang, Guoqing“…In this study, we used the biclustering algorithm integrated into cMonkey, sequence alignment, Gene Ontology (GO), Kyoto Encyclopedia of Genes and Genomes (KEGG), and other bioinformatics methods to scan the whole genome of M. tuberculosis as well as to identify and statistically analyze the genes related to the synthesis of the M. tuberculosis cell wall. …”
Publicado 2020
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18679“…Next generation sequencing (NGS) analyzed their miRNA expression patterns. miRanda and TargetScan databases were used to predict the miRNAs’ target genes followed by analyses of Gene ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) to perform function grouping and pathway analyses. qRT-PCR verified the identity of differentially expressed miRNAs that were revealed in the NGS results. …”
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18680por Zhao, Jun, Su, Yu, Jiao, Jianfei, Wang, Zhengchun, Fang, Xiangchun, He, Xuefeng, Zhang, Xiaofeng, Liu, Zhao, Xu, Xilin“…For mRNAs in the key module, gene ontology and Kyoto Encyclopedia of Genes and Genomes pathway enrichment analyses were carried out using the DAVID database. …”
Publicado 2020
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