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  1. 3081
    por Bisschop, Gertjan
    Publicado 2022
    “…The associated software is available as an open-source Python library, agemo.…”
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  2. 3082
    “…Hence, automating the multi-step computational process and making it a black box that can be handled by anybody are important for effective database construction and fast realistic material design through the framework of black-box optimization where machine learning algorithms are introduced as a predictor. Here, we propose a Python library, QCforever, to automate the computation of some molecular properties and chemical phenomena induced by molecules. …”
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  3. 3083
    “…In this paper, we present a quite simple algorithm named autoCABS; a Python implementation under a free software license is offered at Github. …”
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  4. 3084
    “…Importantly, user-friendly, ready-to-use and well-documented code in Python and MATLAB with exemplary data is provided as an interactive experience for the reader, as well as a starting point for further analysis. …”
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  5. 3085
    por Duggan, Ben, Metzcar, John, Macklin, Paul
    Publicado 2021
    “…To address these issues, we created the Distributed Automated Parameter Testing (DAPT) Python package. By hosting parameters in an online (and often free) “database”, multiple individuals can run parameter sets simultaneously in a distributed fashion, enabling ad hoc crowdsourcing of computational power. …”
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  6. 3086
    “…Here, we present HeartCV: an open-source Python package for automated measurement of heart rate and heart rate variability that integrates automated localization and is transferrable across a wide range of species. …”
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  7. 3087
    “…AVAILABILITY AND IMPLEMENTATION: GTDB-Tk is implemented in Python and licenced under the GNU General Public Licence v3.0. …”
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  8. 3088
    “…AVAILABILITY AND IMPLEMENTATION: CellSium is free and open source software under the BSD license, implemented in Python, available at github.com/modsim/cellsium (DOI: 10.5281/zenodo.6193033), along with documentation, usage examples and Docker images. …”
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  9. 3089
    por Blum, Benjamin C, Emili, Andrew
    Publicado 2021
    “…AVAILABILITY AND IMPLEMENTATION: Omics Notebook is implemented in Python and R and is available for download from https://github.com/cnsb-boston/Omics_Notebook with additional documentation under a GNU GPLv3 license. …”
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  10. 3090
    “…However, open tools for large-scale meshing, skeletonization, and data management have been missing. Igneous is a Python-based distributed computing framework that enables economical meshing, skeletonization, image hierarchy creation, and data management using cloud or cluster computing that has been proven to scale horizontally. …”
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  11. 3091
    “…The backend tools are implemented in Python and C. The CRISPRon and CRISPRoff webservers and command-line tools are freely available at https://rth.dk/resources/crispr.…”
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  12. 3092
    “…AVAILABILITY AND IMPLEMENTATION: Software available at https://gitlab.com/togop/3DPolyS-LE; implemented in Python and Fortran 2003 and supported on any Unix-based operating system (Linux and Mac OS). …”
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  13. 3093
    “…Using ILEE, we constructed a Python library to enable automated cytoskeletal image analysis, providing biologically interpretable indices measuring the density, bundling, segmentation, branching, and directionality of the cytoskeleton. …”
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  14. 3094
    “…MSALigMap is written in Python. There are several tools and servers available for comparing and mapping active-site amino-acid residues among protein structures. …”
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  15. 3095
    “…The test stand consists of an Arduino Mega microcontroller, a rotary table driven and controlled by a stepper motor, a touch display whose task is to control the magnetic field measurement parameters and display 3D data, and proprietary software made in the Python programming language. The structural elements of the stand model were produced by an additive method using a 3D printer. …”
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  16. 3096
    “…AVAILABILITY AND IMPLEMENTATION: PRAWNS is implemented in C++ and Python3, licensed under the GPLv3 license, and freely downloadable from GitHub (https://github.com/KiranJavkar/PRAWNS.git). …”
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  17. 3097
    por Li, Shuzhao, Zheng, Shujian
    Publicado 2023
    “…It is implemented as a Python package (khipu), and provides a JSON format for easy data exchange and software interoperability. …”
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  18. 3098
    por Hugoson, Eric, Lam, Wai Tin, Guy, Lionel
    Publicado 2019
    “…AVAILABILITY AND IMPLEMENTATION: miComplete is written in Python 3 and released under GPLv3. Source code and documentation are available at https://bitbucket.org/evolegiolab/micomplete. …”
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  19. 3099
  20. 3100
    “…This involves dissociating and isolating neurons from intact tissues and patch-clamping using a robotic instrument, followed by using an open-source Python script for analysis and filtration. As a proof of concept, we apply this approach to investigate the biophysical properties of voltage-gated sodium (Nav) channels in dorsal root ganglion (DRG) neurons, which are among the most diverse and complex neuronal cells. …”
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