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  1. 3181
    “…FAME is written in PHP and uses the Python-based PySCeS-CBM for its linear solving capabilities. …”
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    FAME, the Flux Analysis and Modeling Environment
  2. 3182
    “…The algorithm was implemented in Python language and is freely available on the web.…”
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    Sequence Comparison Alignment-Free Approach Based on Suffix Tree and L-Words Frequency
  3. 3183
    por Zanini, Fabio, Neher, Richard A.
    Publicado 2012
    “…The library is implemented as a collection of C++ classes and a Python interface. Availability: http://code.google.com/p/ffpopsim/. …”
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    FFPopSim: an efficient forward simulation package for the evolution of large populations
  4. 3184
    “…Availability and implementation: pyGenClean is an open source Python 2.7 software and is freely available, along with documentation and examples, from http://www.statgen.org. …”
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    pyGenClean: efficient tool for genetic data clean up before association testing
  5. 3185
    “…These were directly obtained from GBIF through the online interface, while E-utilities and Python were used in combination with a programmatic web service access to obtain data from the NCBI Nucleotide Database. …”
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    The World Bacterial Biogeography and Biodiversity through Databases: A Case Study of NCBI Nucleotide Database and GBIF Database
  6. 3186
    “…AVAILABILITY AND IMPLEMENTATION: K-Map has been implemented in python scripting language and the website is freely available at: http://tanlab.ucdenver.edu/kMap.…”
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    K-Map: connecting kinases with therapeutics for drug repurposing and development
  7. 3187
    “…Implemented by Django, Python, R, and Linux shell programming, run under Linux-Apache web server, and communicated through MySQL, WCTDS provides a friendly framework to efficiently receive the user input and to run mathematical models for analyzing data and then to present results to users. …”
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    A Web-Server of Cell Type Discrimination System
  8. 3188
    “…By considering different functional neuroimaging applications, we illustrate how scikit-learn, a Python machine learning library, can be used to perform some key analysis steps. …”
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    Machine learning for neuroimaging with scikit-learn
  9. 3189
    “…The blast results were then analyzed with in-house Python scripts. An empirical formula was proposed to identify the putative pathogens. …”
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    An Efficient Strategy of Screening for Pathogens in Wild-Caught Ticks and Mosquitoes by Reusing Small RNA Deep Sequencing Data
  10. 3190
    “…The code is implemented in Python, relies on open software, and is available under the GNU General Public License. …”
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    GraTeLPy: graph-theoretic linear stability analysis
  11. 3191
    “…Software is implemented in Python, and source code is available for download by following instructions on the main site. …”
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    HiBrowse: multi-purpose statistical analysis of genome-wide chromatin 3D organization
  12. 3192
    “…Here an attempt to provide a collaborative framework for the analysis of synchrotron tomographic data that has the potential to unify the effort of different facilities and beamlines performing similar tasks is described in detail. The proposed Python-based framework is open-source, platform- and data-format-independent, has multiprocessing capability and supports procedural programming that many researchers prefer. …”
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    TomoPy: a framework for the analysis of synchrotron tomographic data
  13. 3193
    “…We present the general workflow of the pipeline, along with a typical use case for the software. sfDM is written in Python and is freely available as an open-source package under the Berkley Software Distribution (BSD) license to promote transparency and reproducibility.…”
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    sfDM: Open-Source Software for Temporal Analysis and Visualization of Brain Tumor Diffusion MR Using Serial Functional Diffusion Mapping
  14. 3194
    “…We will focus on software written in Java, JavaScript or Python. We truly believe this software offers the potential to turn tedious data into exciting visual stories.…”
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    Open source libraries and frameworks for biological data visualisation: A guide for developers
  15. 3195
    “…In order to identify crystal hits, new multi-processing and GUI-driven Python-based pre-analysis software was developed, named NanoPeakCell, that was able to read data from a variety of crystallographic image formats. …”
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    Raster-scanning serial protein crystallography using micro- and nano-focused synchrotron beams
  16. 3196
    por Zeng, Hui, Qiu, Chengxiang, Cui, Qinghua
    Publicado 2015
    “…The web site was implemented using Django, a Python web framework. Finally, we believe that this database will be useful for related researches. …”
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    Drug-Path: a database for drug-induced pathways
  17. 3197
    por Machado, Denis Jacob
    Publicado 2015
    “…The programs that comprises this toolkit are written in Python, hence they do not require installation and have minimum dependencies. …”
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    YBYRÁ facilitates comparison of large phylogenetic trees
  18. 3198
    “…Protein database files and python scripts are included for further investigation.…”
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    Biochemical and computational analyses of two phenotypically related GALT mutations (S222N and S135L) that lead to atypical galactosemia
  19. 3199
    “…To address these problems we have developed pycortex, a Python toolbox for interactive surface mapping and visualization. …”
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    Pycortex: an interactive surface visualizer for fMRI
  20. 3200
    “…TRANSIT is written in Python, and thus can be run on Windows, OSX and Linux platforms. …”
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    TRANSIT - A Software Tool for Himar1 TnSeq Analysis
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