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  1. 3561
    por Xu, Dandan, Pu, Yihan, Guo, Xulin
    Publicado 2020
    “…Therefore, this study proposed to develop a method to quantify both GV and standing dead matter (SDM) fraction cover from field-taken digital RGB images with semi-automated batch processing capabilities (i.e., written as a python script) for mixed grasslands with more complex background information including litter, moss, lichen, rocks and soil. …”
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    Online Artículo Texto
    A Semi-Automated Method to Extract Green and Non-Photosynthetic Vegetation Cover from RGB Images in Mixed Grasslands
  2. 3562
    “…Finally, we make drug2ways available to the scientific community as a Python package that enables conducting these applications on multiple standard network formats.…”
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    Drug2ways: Reasoning over causal paths in biological networks for drug discovery
  3. 3563
    “…Swarm-CG is available with all its dependencies via the Python Package Index (PIP package: swarm-cg). Demonstration data are available at: www.github.com/GMPavanLab/SwarmCG.…”
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    Swarm-CG: Automatic Parametrization of Bonded Terms in MARTINI-Based Coarse-Grained Models of Simple to Complex Molecules via Fuzzy Self-Tuning Particle Swarm Optimization
  4. 3564
    “…Here, we present the Platform for Analysis and Labeling of Medical time Series (PALMS) designed in Python. Its graphical user interface (GUI) facilitates three main types of manual annotations—(1) fiducials, e.g., R-peaks of ECG; (2) events with an adjustable duration, e.g., arrhythmic episodes; and (3) signal quality, e.g., data parts corrupted by motion artifacts. …”
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    Platform for Analysis and Labeling of Medical Time Series
  5. 3565
    “…It is implemented in Python, HTML and JavaScript, and supports the latest versions of major browsers, such as Firefox, Chrome and Safari.…”
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    ProThermDB: thermodynamic database for proteins and mutants revisited after 15 years
  6. 3566
    “…Based on these mapped variants, scoring and alignment are conducted and then reported as a table comprising the off-target propensity of all guide RNAs from a given gene sequence. The Python script for this program is freely available from: https://github.com/vaprilyanto/crop.…”
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    CROP: a CRISPR/Cas9 guide selection program based on mapping guide variants
  7. 3567
    “…We already implemented PEtab support into eight well-established model simulation and parameter estimation toolboxes with hundreds of users in total. We provide a Python library for validation and modification of a PEtab problem and currently 20 example parameter estimation problems based on recent studies.…”
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    PEtab—Interoperable specification of parameter estimation problems in systems biology
  8. 3568
    “…ViralRecall is written in Python 3.5 and is freely available on GitHub: https://github.com/faylward/viralrecall.…”
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    ViralRecall—A Flexible Command-Line Tool for the Detection of Giant Virus Signatures in ‘Omic Data
  9. 3569
    “…Therefore, the aim of this study was to integrate the LMC hand motion data into the AMS in order to improve the process of recording a hand movement. A Python-based interface between the LMC and the AMS, termed ROSE Motion, was developed. …”
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    Hand Motion Capture from a 3D Leap Motion Controller for a Musculoskeletal Dynamic Simulation
  10. 3570
    “…The software is implemented in both MATLAB and Python and is available freely as an open-source software package.…”
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    REGALS: a general method to deconvolve X-ray scattering data from evolving mixtures
  11. 3571
    “…The platform converts the LaTeX model into a formal Algebraic Modeling Language (AML) representation based on Pyomo through a parsing engine written in Python and solves by either via NEOS server or locally installed solvers, using a friendly Graphical User Interface (GUI). …”
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    An integrated platform for intuitive mathematical programming modeling using LaTeX
  12. 3572
    “…The results of numerical simulations of the HPC samples were obtained by using the Abaqus package that we supplemented with our in-house finite element method (FEM) computer programs written in Python and the homogenization toolbox Homtools. This has allowed us to better account for the nonlinear response of concrete. …”
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    Influence of Boundary Conditions on Numerical Homogenization of High Performance Concrete
  13. 3573
    “…To tackle these challenges, this paper presents EPypes, an architecture and Python-based software framework for developing vision algorithms in a form of computational graphs and their integration with distributed systems based on publish-subscribe communication. …”
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    EPypes: a framework for building event-driven data processing pipelines
  14. 3574
    “…Finally, we introduce regression toolboxes for Python and MATLAB that implement our algorithm.…”
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    Correlation Constraints for Regression Models: Controlling Bias in Brain Age Prediction
  15. 3575
    “…The models described in this work are readily available in a Python script for the discovery of novel cruzain inhibitors.…”
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    Predictive Global Models of Cruzain Inhibitors with Large Chemical Coverage
  16. 3576
    “…The data are accessible via OmniPath’s web service (https://omnipathdb.org/), a Cytoscape plug‐in, and packages in R/Bioconductor and Python, providing access options for computational and experimental scientists. …”
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    Integrated intra‐ and intercellular signaling knowledge for multicellular omics analysis
  17. 3577
    “…This study analyzes the effects of COVID-19 based on likely positive cases and fatality in India during and after the lockdown period from March 24, 2020, to May 24, 2020. METHODS: Python has been used as the main programming language for data analysis and forecasting using the Prophet model, a time series analysis model. …”
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    An Eye on the Future of COVID-19: Prediction of Likely Positive Cases and Fatality in India over a 30-Day Horizon Using the Prophet Model
  18. 3578
    “…RESULTS: We developed Atlas, a Python software that converts genome graphs and gene regulatory, interaction and metabolic networks into dynamic models. …”
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    Atlas: automatic modeling of regulation of bacterial gene expression and metabolism using rule-based languages
  19. 3579
    “…AVAILABILITY AND IMPLEMENTATION: The Sciope Python3 toolbox is freely available on https://github.com/Sciope/Sciope, and has been tested on Linux, Windows and macOS platforms. …”
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    Scalable machine learning-assisted model exploration and inference using Sciope
  20. 3580
    “…The model is designed and developed through the python programming language and compares with the most popular classifier, i.e., Decision Tree, ID3, and support vector machine. …”
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    A Novel Ensemble-based Classifier for Detecting the COVID-19 Disease for Infected Patients
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