“…RESULTS: We present pyAmpli, a platform independent parallelized Python package that implements an amplicon-based germline and somatic variant filtering strategy for Haloplex data. pyAmpli can filter variants for systematic errors by user pre-defined criteria. …”
Enlace del recurso
Enlace del recurso
Enlace del recurso

“…Internally, the software is a C++/Python hybrid using OpenGL graphics. Computations are performed on the GPU, and are defined in the GLSL shading language. …”
Enlace del recurso
Enlace del recurso
Enlace del recurso

“…Mordred can be easily installed and used in the command line interface, as a web application, or as a high-flexibility Python package on all major platforms (Windows, Linux, and macOS). …”
Enlace del recurso
Enlace del recurso
Enlace del recurso

“…AVAILABILITY AND IMPLEMENTATION: The Python simulation tool and a cross-platform graphical user interface are available as open source software under the GNU GPL v2 license (http://www.bioinformatics.intec.ugent.be/omsim). …”
Enlace del recurso
Enlace del recurso
Enlace del recurso

“…AVAILABILITY AND IMPLEMENTATION: Python 2.7 code of illustrative examples can be found in the Supplementary Material. …”
Enlace del recurso
Enlace del recurso
Enlace del recurso

“…The program is implemented in Python and C and licensed under the GNU Public License. …”
Enlace del recurso
Enlace del recurso
Enlace del recurso

“…The diagnostic and predictive accuracy, sensitivity, specificity, positive predictive value, negative predictive value, receiver operating characteristic (ROC) curve, area under the ROC curve, confusion matrix, and 95% confidence intervals (CIs) were calculated using our deep CNN algorithm, based on a Keras framework in Python. RESULTS: The periapical radiographic dataset was split into training (n=1,044), validation (n=348), and test (n=348) datasets. …”
Enlace del recurso
Enlace del recurso
Enlace del recurso

“…Imagery is acquired using a Headwall Nano-Hyperspec [Formula: see text] camera, orthorectified in Headwall SpectralView [Formula: see text] , and processed in Python programming language using eXtreme Gradient Boosting (XGBoost), Geospatial Data Abstraction Library (GDAL), and Scikit-learn third-party libraries. …”
Enlace del recurso
Enlace del recurso
Enlace del recurso

“…We present an openly accessible Python implementation of these approaches and demonstrate that editing cortical segmentations using two-dimensional histogram representations as an additional post-processing step aids existing algorithms and yields improved gray matter borders. …”
Enlace del recurso
Enlace del recurso
Enlace del recurso

“…AVAILABILITY AND IMPLEMENTATION: Python source code and associated documentation are available at https://github.com/jaebird123/tusv.…”
Enlace del recurso
Enlace del recurso
Enlace del recurso

“…The software is written in Python and is available under the open source license GNU GPL version 3.…”
Enlace del recurso
Enlace del recurso
Enlace del recurso

“…AVAILABILITY AND IMPLEMENTATION: The Python implementation of KRL and scripts for running our experiments are available at https://github.com/BorgwardtLab/Kernelized-Rank-Learning. …”
Enlace del recurso
Enlace del recurso
Enlace del recurso

“…It is available to install from the Python Package Index (as qtlsearch), with the source available from https://bitbucket.org/alex-warwickvesztrocy/qtlsearch. …”
Enlace del recurso
Enlace del recurso
Enlace del recurso

“…We additionally use an off-the-shelf digital oscilloscope for data capture and custom-written Python code for generating and analyzing the retinal images. …”
Enlace del recurso
Enlace del recurso
Enlace del recurso

“…The MOB-suite is written in Python 3 and is available from https://github.com/phac-nml/mob-suite.…”
Enlace del recurso
Enlace del recurso
Enlace del recurso

“…RESULTS: VCF2SM is a Python script that integrates sequencing depth information of polymorphisms in variant call format (VCF) files and SuperMASSA software for quantitative genotype calling. …”
Enlace del recurso
Enlace del recurso
Enlace del recurso

“…PhenotypeSeeker is implemented in Python programming language, is open-source software and is available at GitHub (https://github.com/bioinfo-ut/PhenotypeSeeker/).…”
Enlace del recurso
Enlace del recurso
Enlace del recurso

“…SRW is interfaced with Sirepo by means of a Python application programming interface. Sirepo supports most of the optical elements currently used at beamlines, including recent developments in SRW. …”
Enlace del recurso
Enlace del recurso
Enlace del recurso

“…One hundred and five kidney samples were examined from 10 different wildlife species (antelope) greater cane rat (GCR), hare, African giant rat (AGR), tree hyrax, civet cat, monitor lizard, python, bushbuck and partridge) using a combination of Ellinghausen McCullough Johnson Harris (EMJH) medium, microscopic agglutination test (MAT), Warthin–Starry silver stain (WSss) and immunohistochemistry. …”
Enlace del recurso
Enlace del recurso
Enlace del recurso

“…These videos are then analysed by the Python package Embryo Computer Vision (EmbryoCV), which extracts phenomic data for morphological, physiological, behavioural, and proxy traits during the process of embryonic development. …”
Enlace del recurso
Enlace del recurso
Enlace del recurso