“…Here, we present SanPy, a Python-based open-source and freely available software pipeline for the analysis and exploration of whole-cell current-clamp recordings. …”
Enlace del recurso
Enlace del recurso
Enlace del recurso

“…Additionally, scBalance displays impressive scalability in identifying rare cell types in million-level datasets, as shown in the bronchoalveolar cell landscape. scBalance is also significantly faster than commonly used tools and comes in a user-friendly format, making it a superior tool for scRNA-seq analysis on the Python-based platform.…”
Enlace del recurso
Enlace del recurso
Enlace del recurso

“…Software for operating with regular vines is available for R, matlab and Python. However, no dataset containing all regular vines is available. …”
Enlace del recurso
Enlace del recurso
Enlace del recurso

“…Data were analyzed using Microsoft Excel Spreadsheet for descriptive statistics and Python 3.0 scikit-learn package. RESULTS: The study showed that “Lonely” and “Hopeless” were the top two mental health symptoms. …”
Enlace del recurso
Enlace del recurso
Enlace del recurso

“…AVAILABILITY AND IMPLEMENTATION: tiny-count and other tinyRNA tools are implemented in Python, C++, Cython, and R, and the workflow is coordinated with CWL. tiny-count and tinyRNA are free and open-source software distributed under the GPLv3 license. tiny-count can be installed via Bioconda (https://anaconda.org/bioconda/tiny-count) and both tiny-count and tinyRNA documentation and software downloads are available at https://github.com/MontgomeryLab/tinyRNA. …”
Enlace del recurso
Enlace del recurso
Enlace del recurso

“…Nanoscale spatiotemporal indexing clustering (NASTIC) has been implemented as a free and open-source Python graphic user interface.…”
Enlace del recurso
Enlace del recurso
Enlace del recurso

“…For image training, we utilized the Python Keras package. The system proved the need for image segmentation in hand gesture recognition. …”
Enlace del recurso
Enlace del recurso
Enlace del recurso

“…The chi-square test, Spearman correlation, and Python programming language v3 were used for statistical analysis. …”
Enlace del recurso
Enlace del recurso
Enlace del recurso

“…An open-source version of our developed Python package, cvdm, is available for comparisons using other data sources.…”
Enlace del recurso
Enlace del recurso
Enlace del recurso

“…AVAILABILITY AND IMPLEMENTATION: SnapCCESS is implemented as a Python package and is freely available from https://github.com/PYangLab/SnapCCESS under the open-source license of GPL-3. …”
Enlace del recurso
Enlace del recurso
Enlace del recurso

“…To address this gap, we present an open-source package called Multi-Object Tracking in Heterogeneous environments (MOTHe), a Python-based application that uses a basic convolutional neural network for object detection. …”
Enlace del recurso
Enlace del recurso
Enlace del recurso

“…AVAILABILITY AND IMPLEMENTATION: The source code, including scripts for the analysis of key findings, can be found at https://github.com/boooooogey/ATAConv, implemented in Python.…”
Enlace del recurso
Enlace del recurso
Enlace del recurso

“…Latent Dirichlet allocation (LDA) was used for clustering, and support vector machine (SVM), scikit-learn library, and Python programming language were used for text classification. …”
Enlace del recurso
Enlace del recurso
Enlace del recurso

“…The convolutional neural network (CNN) models were trained on 2D images of the spectra using transfer learning of Inception V3, and the logistic regression models were trained using array-based data and Scikit Learn implementation in Python. Our training dataset consisted of 21,166 mass spectra from the United States’ National Institute of Standards and Technology (NIST) Webbook. …”
Enlace del recurso
Enlace del recurso
Enlace del recurso

“…Additionally, we made use of a customised Python-based image processing and analysis pipeline to quantitatively assess memantine-dependent changes in the autophagosomal and lysosomal compartments. …”
Enlace del recurso
Enlace del recurso
Enlace del recurso

“…We developed a novel approach named genetic tAI (gtAI) implemented as a Python package (https://github.com/AliYoussef96/gtAI), which employs a genetic algorithm to obtain the best set of S ( ij ) weights and follows a new codon usage-based workflow that better computes the tAI of genomes from the three domains of life. …”
Enlace del recurso
Enlace del recurso
Enlace del recurso

“…In this work, we: (1) provide an overview of existing methods and tools for representative protein structural ensemble generation and analysis; (2) unify existing approaches in an open-source Python package, and a portable Docker image, providing interactive visualizations within a Jupyter Notebook pipeline; (3) test our pipeline on a few canonical examples from the literature. …”
Enlace del recurso
Enlace del recurso
Enlace del recurso

“…Performance has been drastically improved, with up to ten times reduction in computational time and scalability to millions of cells, making singleCellHaystack a suitable tool for exploratory analysis of atlas level datasets. singleCellHaystack is available as packages in both R and Python.…”
Enlace del recurso
Enlace del recurso
Enlace del recurso

“…Our implementation of the FastKnock method in Python is publicly available at https://github.com/leilahsn/FastKnock.…”
Enlace del recurso
Enlace del recurso
Enlace del recurso

“…We provide an open-source implementation of these methods in our new Python package named hetmatpy.…”
Enlace del recurso
Enlace del recurso
Enlace del recurso