“…Thousands of city names around the world were extracted from a large volume of Twitter messages (over 5 million tweets) by using the Twitter Application Programming Interface (APIs) and Python language computer programs. The percentages of distant city names (cities located in distant states or other countries far away from the locations of Twitter users) were used to estimate the level of global geographical awareness for Twitter users in each U.S. city. …”
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“…The flexibility of Blender, particularly its embedded Python application programming interface, means that our methods can be easily extended to other organisms. …”
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“…Finally we compare CSUMI to two correlation-based approaches, showing ours outperforms both. A python implementation is available online on the CSUMI website.…”
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“…The proposed model can also be easily applied to paired-end ATAC-seq and DNase-seq data. msCentipede, a Python implementation of our algorithm, is available at http://rajanil.github.io/msCentipede.…”
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“…As we find MoI to give accurate results in most situations of practical interest, including anisotropic slices covered with highly conductive saline and MEA-electrode contacts of sizable physical extensions, a Python software package (ViMEAPy) has been developed to facilitate forward-modelling of MEA potentials generated by biophysically detailed multicompartmental neurons. …”
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“…ScanIndel is implemented in Python, and is freely available for academic use at https://github.com/cauyrd/ScanIndel. …”
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“…To address these challenges I present MorphoTester, an open source application for visualizing and quantifying topography from 3D triangulated polygon meshes. This application is Python-based and is free to use. MorphoTester implements three commonly used dental topographic metrics–Dirichlet normal energy, relief index, and orientation patch count rotated (OPCR). …”
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“…Availability: The proposed alignment method has been implemented as a stand-alone application in Python, available for download at http://github.com/joewandy/peak-grouping-alignment. …”
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“…Availability and implementation: The methods described in this article are made available as a Python package (LGPL license) and also accessible through a web interface. …”
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“…Availability and implementation: MSProGene is written in Java and Python. It is open source and available at http://sourceforge.net/projects/msprogene/. …”
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“…The module is written in Python with an additional IPython/Jupyter notebook based GUI, allowing models to be fit, simulations to be run and results to be shared through simply interacting with a webpage. …”
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“…The DoMo-Pred command line tool is implemented using Python 2.7 and C ++. Contact: gary.bader@utoronto.ca Supplementary information: Supplementary data are available at Bioinformatics online.…”
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“…Availability and Implementation: TimeTP is implemented in Python and available at http://biohealth.snu.ac.kr/software/TimeTP/. …”
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“…The software is implemented in Python using the Django web framework, and runs on elastic cloud computing resources from Amazon Web Services. …”
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“…The MMP inhibitors provided in MMpI database are optimized using Python-based Hierarchical Environment for Integrated Xtallography (Phenix) software. …”
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“…There are several libraries for reading BAM files, such as Bio-SamTools for Perl and pysam for Python. Both allow access to the BAM’s read information and can filter reads, but require substantial boilerplate code; this is high overhead for mostly ad hoc filtering. …”
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“…The software is implemented in C, Python and shell scripting and is capable of running on Linux/Unix platforms. …”
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“…Availability and Implementation: The RTCR pipeline is implemented in Python (v2.7) and C and is freely available at http://uubram.github.io/RTCR/along with documentation and examples of typical usage. …”
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“…METHODS: We designed a specific clinical record using the Python programming language. We considered all of the diagnoses according to the ICD-9-CM. …”
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“…This toolkit consists of a C++ program and a series of Python and R scripts. From the trajectory file of MD simulations and a structure file, users can generate several images and statistics of ion conduction processes. …”
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