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4841“…We present a resource that allows researchers to rapidly curate and update their own databases from existing published data. We use open-source Python code to web scrape the Figshare repository for journal supplementary files using the application programming interface, allowing for the collection and download of hundreds of supplementary files and metadata in minutes. …”
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4842por Edvardsen, Isak Paasche, Teterina, Anna, Johansen, Thomas, Myhre, Jonas Nordhaug, Godtliebsen, Fred, Bolstad, Napat Limchaichana“…Models were trained using GeForce RTX 2080 Ti with 11 GB GPU memory (NVIDIA Corporation, Santa Clara, CA, USA). Python programming language version 3.7 was used for analysis. …”
Publicado 2022
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4843por Krämer, Andreas, Green, Jeff, Billaud, Jean-Noël, Pasare, Nicoleta Andreea, Jones, Martin, Tugendreich, Stuart“…AVAILABILITY AND IMPLEMENTATION: Python implementations of the gene and function embedding algorithms operating on a subset of our literature-curated content as well as other code used for this paper are made available as part of the Supplementary data. …”
Publicado 2022
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4844por Foley, Patrick, Sheller, Micah J, Edwards, Brandon, Pati, Sarthak, Riviera, Walter, Sharma, Mansi, Narayana Moorthy, Prakash, Wang, Shih-han, Martin, Jason, Mirhaji, Parsa, Shah, Prashant, Bakas, Spyridon“…Open federated learning (OpenFL) framework is an open-source python-based tool for training ML/DL algorithms using the data-private collaborative learning paradigm of FL, irrespective of the use case. …”
Publicado 2022
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4845“…In this spirit, the new Python library amk-tools has been designed to read and manipulate complex reaction networks, greatly simplifying their overall analysis. …”
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4846por Edeh, Michael Onyema, Dalal, Surjeet, Obagbuwa, Ibidun Christiana, Prasad, B. V. V. Siva, Ninoria, Shalini Zanzote, Wajid, Mohd Anas, Adesina, Ademola Olusola“…Machine learning algorithms; Random Forest classification and CHAID were applied for the study, while Python was used for implementation of algorithms and for visualization of results. …”
Publicado 2022
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4847por Maia, Guilherme Augusto, Filho, Vilmar Benetti, Kawagoe, Eric Kazuo, Teixeira Soratto, Tatiany Aparecida, Moreira, Renato Simões, Grisard, Edmundo Carlos, Wagner, Glauber“…AnnotaPipeline is a Unix-based pipeline developed using Python and is available at: https://github.com/bioinformatics-ufsc/AnnotaPipeline.…”
Publicado 2022
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4848“…A combination of support, lower bound of 95% confidence interval (CI) of the proportional reporting ratio (PRR) was applied to detect significant hot drug and ADE signals by the Python programming language on the Jupyter notebook. …”
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4849“…Further, we revealed, for the first time, that the proposed model can represent obvious motif distribution across Kcr sites in non-histone proteins. The source code (in Python) is publicly available at https://github.com/Jhabindra-bioinfo/CapsNh-Kcr.…”
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4850“…The main tools applied were ArcGIS supported with Python scripting, including generally used modules and procedures dedicated to geoprocessing. …”
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4851por Cesaro, Giulia, Milia, Mikele, Baruzzo, Giacomo, Finco, Giovanni, Morandini, Francesco, Lazzarini, Alessio, Alotto, Piergiorgio, da Cunha Carvalho de Miranda, Noel Filipe, Trajanoski, Zlatko, Finotello, Francesca, Di Camillo, Barbara“…AVAILABILITY AND IMPLEMENTATION: MAST, implemented in Python language, is freely available with an open-source license through GitLab (https://gitlab.com/sysbiobig/mast), and a Docker image is provided to ease its deployment. …”
Publicado 2022
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4852por Zhang, Yicheng, Wang, Qiong, Xue, Mei, Pang, Bo, Yang, Min, Zhang, Zhixin, Niu, Wenquan“…Information was gleaned via online questionnaires and analyzed by the PyCharm and Python. RESULTS: Data from 11,308 children were abstracted for analysis, and 3,970 of children had central obesity. …”
Publicado 2022
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4853por Durán Acevedo, Cristhian Manuel, Carrillo Gómez, Jeniffer Katerine, Albarracín Rojas, Camilo Andrés“…To carry out the pre-processing and data processing from the measurements obtained previously by both systems, a set of algorithms developed in Python software were used to perform the data analysis. …”
Publicado 2021
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4854“…The GAP categorizes CT images, assigning each sample a score. Python was employed to pre-process all CT images in the LIDI-IDRI, and the obtained 8,474 images (3,259 benign and 5,215 lung nodules) were used to evaluate the method's performance. …”
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4855por Bacsu, Juanita-Dawne, O’Connell, Megan E, Cammer, Allison, Ahmadi, Soheila, Berger, Corinne, Azizi, Mehrnoosh, Gowda-Sookochoff, Rory, Grewal, Karl“…We collected 6,243 relevant tweets using the Twint application in Python from September 8, 2020, to December 8, 2021. …”
Publicado 2022
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4856“…Posts were extracted from the ALS caregiver discussion forum via web scraping using Python in March 2022. The extracted posts are dated between June 2005 and January 2022. …”
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4857“…The statistical and exploratory data analysis (EDA) was conducted using Python 3.8.5. The correlation between the target and feature variables was performed by Pearson Correlation analysis. …”
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4858“…Dimensionality reduction and visualization were performed using Python. The three markers were not clearly clustered after t-distributed stochastic neighbor embedding. …”
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4859“…AVAILABILITY AND IMPLEMENTATION: PEMT is an open-source Python tool and its source code and PyPi package are available at https://github.com/Fraunhofer-ITMP/PEMT and https://pypi.org/project/PEMT/, respectively. …”
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4860por Burton, Ross J, Cuff, Simone M, Morgan, Matt P, Artemiou, Andreas, Eberl, Matthias“…AVAILABILITY AND IMPLEMENTATION: GeoWaVe is available as part of the CytoCluster package https://github.com/burtonrj/CytoCluster and published on the Python Package Index https://pypi.org/project/cytocluster. …”
Publicado 2022
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