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5261por Wahid, Kareem A., Olson, Brennan, Jain, Rishab, Grossberg, Aaron J., El-Habashy, Dina, Dede, Cem, Salama, Vivian, Abobakr, Moamen, Mohamed, Abdallah S. R., He, Renjie, Jaskari, Joel, Sahlsten, Jaakko, Kaski, Kimmo, Fuller, Clifton D., Naser, Mohamed A.“…Subsequently, using publicly disseminated Python scripts, we generated corresponding segmentations files in Neuroimaging Informatics Technology Initiative format. …”
Publicado 2022
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5262por Thormann, Kolja A., Tozzi, Viola, Starke, Paula, Bickeböller, Heike, Baum, Marcus, Rosenberger, Albert“…CONCLUSIONS: The source code (Python version 3.9.4), a standalone executive file, and example data for ImputAccur are freely available at https://gitlab.gwdg.de/kolja.thormann1/imputationquality.git. …”
Publicado 2022
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5263por Feng, Tianyu, Zheng, Zhou, Xu, Jiaying, Liu, Minghui, Li, Ming, Jia, Huanhuan, Yu, Xihe“…The LSTM uses linear as the activation function, the mean square error (MSE) as the loss function and the Adam optimizer to construct the model, while the Prophet model is built on the Python platform. The root mean squared error (RMSE), mean absolute error (MAE) and Mean Absolute Percentage Error (MAPE) are used to measure the predictive performance of the model. …”
Publicado 2022
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5264“…Our new version of aRNAque is available on GitHub as a python script and the benchmark results show improved performance on both Pseudobase++ and the Eterna100 datasets, compared to existing inverse folding tools. …”
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5265por Reuschenbach, Max, Hohrenk-Danzouma, Lotta L., Schmidt, Torsten C., Renner, Gerrit“…The algorithm is implemented in Python, R, and Julia programming languages and supports multi- and cross-platform downstream data handling. …”
Publicado 2022
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5266“…CONCLUSIONS: This study implemented the MoTR method evaluating the suggested effects of daily stressors on nighttime heart rate, sleep time, and physical activity in an individualized way: via the N-of-1 approach. A Python implementation of MoTR is freely available.…”
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5267por Faber, Benjamin G., Ebsim, Raja, Saunders, Fiona R., Frysz, Monika, Davey Smith, George, Cootes, Timothy, Tobias, Jonathan H., Lindner, Claudia“…An automatic method for calculating AA was written in Python 3 utilising these outline points. An iterative approach was taken to developing and validating the method, testing the automated measures against independent batches of manually measured images in sequential experiments. …”
Publicado 2022
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5268“…We evaluate our approach on issue tickets from projects written in C++, Java, JavaScript, PHP, and Python. Our approach achieves ROC-AUC scores between 0.92 and 0.96 for language-specific models. …”
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5269“…MStoCIRC is mainly implemented by Python3 language programming and could be downloaded from GitHub (https://github.com/QUMU00/mstocirc-master). …”
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5270“…The rules-based analysis has been coupled together in a single Python program that can bypass tedious trial and error experiments usually needed in protein-polymer conjugate design and synthesis.…”
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5271por Lasso, Andras, Herz, Christian, Nam, Hannah, Cianciulli, Alana, Pieper, Steve, Drouin, Simon, Pinter, Csaba, St-Onge, Samuelle, Vigil, Chad, Ching, Stephen, Sunderland, Kyle, Fichtinger, Gabor, Kikinis, Ron, Jolley, Matthew A.“…We designed and implemented multiple Python scripted modules within 3D Slicer to import, register, and view 3DE data, including new code to volume render and crop 3DE. …”
Publicado 2022
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5272“…The present work explores the possibility of kinetic measurements of chemical reactions and adsorption processes of homogeneous and heterogeneous systems through the variation of RGB intensities of digital images using a smartphone combined with a program written in Python to accelerate and facilitate data acquisition. …”
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5273por Nayshool, Omri, Kol, Nitzan, Javaski, Elisheva, Amariglio, Ninette, Rechavi, Gideon“…AVAILABILITY AND IMPLEMENTATION: The prediction models were created and tested using Python SciKit-Learn package. They are freely accessible via a friendly web interface we called surviveAI at https://tinyurl.com/surviveai.…”
Publicado 2022
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5274“…All data preprocessing and statistical analyses were performed using Python software. Results: Over the decade, we identified 291 CRE isolates (216 isolates resistant only to ertapenem and 75 resistant to ertapenem and meropenem). …”
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5275por Zhang, Xiaodong, Wang, Pei, Wang, Yafei, Hu, Lian, Luo, Xiwen, Mao, Hanping, Shen, Baoguo“…The preprocessing method of terahertz data, the screening method of terahertz effective spectrum, the selection method of feature wavelength and the establishment method of classification model are studied. Python 3.8 is used to preprocess the terahertz raw data and establish the terahertz effective spectral data set for subsequent processing. …”
Publicado 2022
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5276por De Santis, Matteo, Sorbelli, Diego, Vallet, Valérie, Gomes, André Severo Pereira, Storchi, Loriano, Belpassi, Leonardo“…The implementation, based on the auxiliary density fitting techniques, has been enormously facilitated by BERTHA’s python API (PyBERTHA), which facilitates the interoperability with other FDE implementations available through the PyADF framework. …”
Publicado 2022
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5277por Gagnon, A., Descoteaux, M., Bocti, C., Grenier, G., Gillet, V., Posner, J., Baccarelli, A., Takser, L.“…Multivariate linear regression was performed in python. RESULTS: Lower microstructural complexity was associated with poorer attentional performance on regions of the parietal lobe to the occipital gyrus (P-O, p=0.044, R(2)=0.14, Figure 1.) and the Broadman’s area 8 to area 6 (SF8-SF6, p=0.002, R(2)=0.12, Figure 1.). …”
Publicado 2022
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5278por Giulia, Agostinetto, Anna, Sandionigi, Antonia, Bruno, Dario, Pescini, Maurizio, Casiraghi“…To promote the use of ARM and the visualization of microbiome patterns, specifically, we developed microFIM (microbial Frequent Itemset Mining), a versatile Python tool that facilitates the use of ARM integrating common microbiome outputs, such as taxa tables. microFIM implements interest measures to remove spurious information and merges the results of ARM analysis with the common microbiome outputs, providing similar microbiome strategies that help scientists to integrate ARM in microbiome applications. …”
Publicado 2022
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5279“…To confirm the function of the designed protein, the final molecule was docked to chicken MHC class I using the Pyrex-python 0.8 program. the results of Immune Epitope analysis were confirmed by the docking results between protein and receptor. …”
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5280por Li, Mengqian, Liu, Yuan, Liu, Yan, Pu, Changqin, Yin, Ruocheng, Zeng, Ziqiang, Deng, Libin, Wang, Xing“…Analytical processing of resting-state EEG data was performed using Python and MATLAB software applications. The questionnaire included the Self-Rating Anxiety Scale (SAS), Self-Rating Depression Scale (SDS), Symptom Check-List-90 (SCL-90), and the Eysenck Personality Questionnaire (EPQ). …”
Publicado 2022
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