“…We extracted microvascular parameters from superficial and deep vascular plexuses of the macula, including the area and circularity of foveal avascular zone (FAZ), skeleton density, perfusion density, vessel perimeter index, vessel mean diameter, fractal dimension (FD) and lacunarity using Python and MATLAB. We compared the microvascular parameters between groups and explored their association with thickness of macular layers and clinical outcomes. …”
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“…Moreover, the platform is easy to extend with customizable frontend React.js components and backend Python extensions. GenUI is open source and a recently developed de novo molecular generator, DrugEx, was integrated as a proof of principle. …”
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“…All statistical analyses were done in Python. FINDINGS: Mental health service activity in 2020 increased in all scheduled community appointments (by 15.4% and 5.6% in OHFT and SHFT, respectively). …”
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“…Using pandas and SnowNLP Python libraries, posts were classified into 2 categories, positive and negative. …”
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“…The entire dataset consisting of TROPOMI Level 2 SO(2) geophysical products from UV sensor data collected over Stromboli from 6 May 2018 to 31 May 2021 is processed with purposely adapted Python scripts. A methodological workflow is developed to encompass the extraction of total SO(2) Vertical Column Density (VCD) at given coordinates (including conditional VCD for three different hypothetical peaks at 0–1, 7 and 15 km), as well as filtering by quality in compliance with the Sentinel-5P Validation Team’s recommendations. …”
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“…After that, we applied Genomic Regions Enrichment of Annotations Tool (GREAT) to predict the genomic regions enrichment, and used comb-p python library to detect differentially methylated regions (DMRs). …”
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“…Treatment responses were evaluated based on the modified Response Evaluation Criteria in Solid Tumors (mRECIST) by postoperative CT examination within 2 months after the procedure. Python (version 3.70) was used to develop machine learning models. …”
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“…The software can be used as a python module or as a single-file executable program. …”
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“…To further improve research rigor, the study utilizes SPSS, Python and RStudio to conduct multiple linear regression and polynomial best subset regression (PBSR) analysis for the hierarchical modeling. …”
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“…Additionally, we analyzed 2,770 subjects from the public NHANES dataset from 2018-2019. Python and Scikit-learn were used to analyze the demographics, survey responses, and metal concentrations for these individuals. …”
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“…Data on the patients' demographic characteristics and comorbidities were also collected. Python 3.7 was used as the programming language, and the scikit-learn toolkit was used to complete the derivation and verification of the machine learning methods. …”
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“…All statistics were calculated in Python using Numpy & Scikit-Learn libraries. Comparisons of unpenalized linear regression & Gradient boosted (CatBoost) regressor models were performed by measuring the R(2) & concordance correlation coefficient (CCC) on the application of the model to the test dataset. …”
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“…Our approach was implemented as a Python pipeline and applied to a rosebush dataset including passport and phenotypic data. …”
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“…METHODS: We collected TikTok posts associated with the hashtag #nicsick, using a Python programming package (Selenium) and used an inductive coding approach to analyze video content and characteristics of interest. …”
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“…We constructed a binary classification model with a feedforward neural network using PyTorch 1.6.0 in Python 3.8.3 to classify the episodic migraine and healthy control groups. …”
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“…We employed the XCMS online cloud-based bioinformatics platform to link mTOR-regulated metabolites to biological pathways using the python mummichog algorithm. Statistical significance (P < 0.001) was assessed by ANOVA followed by adhoc unpaired t-test. …”
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“…GenErode is written in Snakemake and Python3 and uses Conda and Singularity containers to achieve reproducibility on high-performance compute clusters. …”
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“…SAPFIR is freely available at https://bioinfo-scottgroup.med.usherbrooke.ca/sapfir/, a website implemented in Python, with all major browsers supported. The source code is available at https://github.com/DelongZHOU/SAPFIR. …”
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“…Functions used to prepare data and run modeling are available via the eumap library for Python.…”
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“…RESULTS: We present Cell-ACDC, an open-source user-friendly GUI-based framework written in Python, for segmentation, tracking and cell cycle annotations. …”
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