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  1. 1501
    por Mannige, Ranjan
    Publicado 2018
    “…For example, 200 distinct conformations can easily be described in one graphic using ℛ (rather than 200 distinct Ramachandran plots). Finally, a new Python-based backbone analysis tool—BackMAP—is introduced, which reiterates how ℛ can be used as a simple and succinct descriptor of protein backbones and their dynamics.…”
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    The BackMAP Python module: how a simpler Ramachandran number can simplify the life of a protein simulator
  2. 1502
    por Choudhary, Saket
    Publicado 2019
    “…However, methods to programmatically access this data are limited. We introduce the Python package, pysradb, which provides a collection of command line methods to query and download metadata and data from SRA, utilizing the curated metadata database available through the SRAdb project. …”
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    pysradb: A Python package to query next-generation sequencing metadata and data from NCBI Sequence Read Archive
  3. 1503
    “…Its core algorithm is written in C++ for computational efficiency, while the R and Python interfaces aim to make the tool accessible to the fast-growing community of R and Python users. …”
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    SimpactCyan 1.0: An Open-source Simulator for Individual-Based Models in HIV Epidemiology with R and Python Interfaces
  4. 1504
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    pyMeSHSim: an integrative python package for biomedical named entity recognition, normalization, and comparison of MeSH terms
  5. 1505
    “…Python language has become the most popular computer language. …”
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    Can Students’ Computer Programming Learning Motivation and Effectiveness Be Enhanced by Learning Python Language? A Multi-Group Analysis
  6. 1506
    por Kulshreshtha, Vikas, Garg, N. K.
    Publicado 2021
    “…In this work, results are also compared with the predictive values generated from the ARIMA and AR model and concluded that the ARIMA model is the best fit model as compared to AR model for predicting the new cases in India. Python programming language has been used for implementation. …”
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    Predicting the New Cases of Coronavirus [COVID-19] in India by Using Time Series Analysis as Machine Learning Model in Python
  7. 1507
    por Gong, Hai, Guo, Wenjun, Neil, Mark A. A.
    Publicado 2021
    “…The reconstruction algorithms implemented in Python include specific optimizations for calculation on a graphics processing unit and we demonstrate its operation on experimental data of static objects and on simulated data of moving objects. …”
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    GPU-accelerated real-time reconstruction in Python of three-dimensional datasets from structured illumination microscopy with hexagonal patterns
  8. 1508
    “…It is the first open source implementation released in the developer friendly Python programming language and can be freely downloaded at .…”
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    Dicom_wsi: A Python Implementation for Converting Whole-Slide Images to Digital Imaging and Communications in Medicine Compliant Files
  9. 1509
    “…Hg-CATH and Pb-CATH4 are cathelicidins from Heterocephalus glaber and Python bivittatus that have been previously identified as potent antibacterial peptides. …”
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    Characterisation of Antiviral Activity of Cathelicidins from Naked Mole Rat and Python bivittatus on Human Herpes Simplex Virus 1
  10. 1510
    “…We found that students in both in-person and remote flipped formats showed increased confidence using Python and related this to their thesis research. …”
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    Moving a Flipped Class Online To Teach Python to Biomedical Ph.D. Students during COVID-19 and Beyond
  11. 1511
    “…This data shows that both CCD and python coding can model biogas production with high accuracy and biogas produced can be used for heating purposes.…”
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    Optimization of biogas yield from anaerobic co-digestion of corn-chaff and cow dung digestate: RSM and python approach
  12. 1512
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    reString: an open-source Python software to perform automatic functional enrichment retrieval, results aggregation and data visualization
  13. 1513
    “…Here, we developed SalmoDEST, an open-source Python tool capable of extracting Salmonella genomes with a coverage higher than 50x and genome length over 4Mb from the GenBank database in the form of complete genomes or contigs, with verification of the serovar to which they belong and identification of the corresponding multi locus sequence type (MLST) profile. …”
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    Retrieving Good-Quality Salmonella Genomes From the GenBank Database Using a Python Tool, SalmoDEST
  14. 1514
    por Tachibana, Ryo, Matsumiya, Kazumichi
    Publicado 2021
    “…Interestingly, all results were perfectly consistent in both Python 2 and 3 environments. Thus, the present study will help establish a more reliable stimulus control for psychological and neuroscientific research controlled by Python environments.…”
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    Accuracy and precision of visual and auditory stimulus presentation in virtual reality in Python 2 and 3 environments for human behavior research
  15. 1515
    por Chen, Xiuqing, Liu, Wei
    Publicado 2022
    “…OBJECTIVE: A retrospective cohort study was conducted to analyze the application value of Python programming in general education and comprehensive quality improvement of medical students. …”
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    The Value of Python Programming in General Education and Comprehensive Quality Improvement of Medical Students Based on a Retrospective Cohort Study
  16. 1516
    “…We have created an open source, automated Python computer script called “Intercellular Junction Organization Quantification” or IJOQ that can handle a high degree of sample-sample staining variability and robustly measure intercellular junction integrity. …”
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    Dynamic Python-Based Method Provides Quantitative Analysis of Intercellular Junction Organization During S. pneumoniae Infection of the Respiratory Epithelium
  17. 1517
    “…Lastly, another python script prioritizes and ranks the mutation effects of variants to output the result file. …”
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    SNPAAMapper-Python: A highly efficient genome-wide SNP variant analysis pipeline for Next-Generation Sequencing data
  18. 1518
    “…In order to find overlaps between predicted G4 sequences and SNPs located in the genomic regions, we developed two complementary computational python codes (SNP-locator and G4-overlap). The codes map a mutation to the overlapping/closest G4 sequences, based on the genetic variant name and the FASTA format of the corresponding gene. …”
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    New complementary python codes to locate Single Nucleotide Polymorphisms (SNPs) and Overlapping G-Quadruplex Sequences (G4s)
  19. 1519
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    A flexible Python-based touchscreen chamber for operant conditioning reveals improved visual perception of cardinal orientations in mice
  20. 1520
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    Mathematical model estimation and prediction application of Covid-19 infection in Indonesia using Levenberg-Marquardt Algorithm based on Python
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