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  1. 1541
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    Retracted: The Value of Python Programming in General Education and Comprehensive Quality Improvement of Medical Students Based on a Retrospective Cohort Study
  2. 1542
    por Djurfeldt, Mikael
    Publicado 2011
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    The Connection-set Algebra: a formalism for the representation of connectivity structure in neuronal network models, implementations in Python and C++, and their use in simulators
  3. 1543
    por Borozan, Ivan, Ferretti, Vincent
    Publicado 2016
    “…To facilitate the classification of long and short DNA sequences, we have developed a Python package that implements a new sequence classification model that we have demonstrated to improve the classification accuracy when compared with other state of the art classification methods. …”
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    CSSSCL: a python package that uses combined sequence similarity scores for accurate taxonomic classification of long and short sequence reads
  4. 1544
    por Alonso-Valerdi, Luz María
    Publicado 2016
    “…With this in mind, NeuroIndex, a Python executable script, estimates a neurophysiological prediction index and the individual alpha frequency (IAF) of the user in question. …”
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    Python Executable Script for Estimating Two Effective Parameters to Individualize Brain-Computer Interfaces: Individual Alpha Frequency and Neurophysiological Predictor
  5. 1545
    “…Additionally, we also provide the Python library and R package of PopSc, which can be flexibly integrated into other advanced bioinformatic packages of population genetics analysis.…”
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    PopSc: Computing Toolkit for Basic Statistics of Molecular Population Genetics Simultaneously Implemented in Web-Based Calculator, Python and R
  6. 1546
    “…To expedite the pace in conducting genome/proteome analysis, we have developed a Python package called Pse-Analysis. The powerful package can automatically complete the following five procedures: (1) sample feature extraction, (2) optimal parameter selection, (3) model training, (4) cross validation, and (5) evaluating prediction quality. …”
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    Pse-Analysis: a python package for DNA/RNA and protein/peptide sequence analysis based on pseudo components and kernel methods
  7. 1547
    “…Here, we present SamuROI (Structured analysis of multiple user-defined ROIs), an open source Python-based analysis environment for imaging data. …”
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    SamuROI, a Python-Based Software Tool for Visualization and Analysis of Dynamic Time Series Imaging at Multiple Spatial Scales
  8. 1548
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    SDMtoolbox 2.0: the next generation Python-based GIS toolkit for landscape genetic, biogeographic and species distribution model analyses
  9. 1549
    “…We present Skan (Skeleton analysis), a Python library for the analysis of the skeleton structures of objects. …”
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    A new Python library to analyse skeleton images confirms malaria parasite remodelling of the red blood cell membrane skeleton
  10. 1550
    “…Tissue samples from Australian carpet pythons (Morelia spilota) with neurological disease were screened for viruses using next-generation sequencing. …”
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    Divergent bornaviruses from Australian carpet pythons with neurological disease date the origin of extant Bornaviridae prior to the end-Cretaceous extinction
  11. 1551
    “…A user-friendly software tool is needed that streamlines the file preparation for database submissions of DNA sequences that are commonly generated in plant and fungal DNA barcoding. METHODS: A Python package was developed that converts DNA sequences from the common EMBL and GenBank flat file formats to submission-ready, tab-delimited spreadsheets (so-called ‘checklists’) for a subsequent upload to the annotated sequence section of the European Nucleotide Archive (ENA). …”
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    EMBL2checklists: A Python package to facilitate the user-friendly submission of plant and fungal DNA barcoding sequences to ENA
  12. 1552
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    OpenPathSampling: A Python Framework for Path Sampling Simulations. 2. Building and Customizing Path Ensembles and Sample Schemes
  13. 1553
    “…Here, we present a new user-friendly Python package BayesPI-BAR2 based on the proposed pipeline for integrative whole-genome sequence analysis. …”
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    BayesPI-BAR2: A New Python Package for Predicting Functional Non-coding Mutations in Cancer Patient Cohorts
  14. 1554
    “…The Burmese python (Python bivittatus) is now established as a breeding population throughout south Florida, USA. …”
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    Environmental DNA sampling reveals high occupancy rates of invasive Burmese pythons at wading bird breeding aggregations in the central Everglades
  15. 1555
    “…To address the diversity of emerging applications, we introduce a software suite called LoadDef that provides a collection of modular functions for modeling planetary deformation within a self‐consistent, Python‐based computational framework. Key features of LoadDef include computation of real‐valued potential, load, and shear Love numbers for self‐gravitating and spherically symmetric planetary models; computation of Love‐number partial derivatives with respect to planetary density and elastic structure; computation of displacement, gravity, tilt, and strain load Green's functions; and computation of three‐component surface displacements induced by surface mass loading. …”
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    LoadDef: A Python‐Based Toolkit to Model Elastic Deformation Caused by Surface Mass Loading on Spherically Symmetric Bodies
  16. 1556
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    DeepCINAC: A Deep-Learning-Based Python Toolbox for Inferring Calcium Imaging Neuronal Activity Based on Movie Visualization
  17. 1557
    “…Here, we present an open-source (Python-based) rapid intensity-leveling and digital-staining package that is specifically designed to render two-channel fluorescence images (i.e. a fluorescent analog of H&E) to the traditional H&E color space for 2D and 3D microscopy datasets. …”
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    FalseColor-Python: A rapid intensity-leveling and digital-staining package for fluorescence-based slide-free digital pathology
  18. 1558
    “…The tool is written in Python with capacity to process data in parallel and is available at (https://hmst-seq.github.io/hmst/).…”
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    HMST-Seq-Analyzer: A new python tool for differential methylation and hydroxymethylation analysis in various DNA methylation sequencing data
  19. 1559
    “…To resolve this, we have developed TAILOR-MS, a Python (programming language) package that aims at assisting: (1) the generation of targeted LC/MS methods for triacylglycerol detection and (2) automating triacylglycerol structural determination and prediction. …”
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    TAILOR-MS, a Python Package that Deciphers Complex Triacylglycerol Fatty Acyl Structures: Applications for Bovine Milk and Infant Formulas
  20. 1560
    “…The package can be installed from the Python Package Index (PyPI) running pip install torchio. …”
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    TorchIO: A Python library for efficient loading, preprocessing, augmentation and patch-based sampling of medical images in deep learning
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