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1por Ruff, Karen M., Muhammad, Ayesha, McCown, Phillip J., Breaker, Ronald R., Strobel, Scott A.“…The glycine riboswitch often occurs in a tandem architecture, with two ligand-binding domains (aptamers) followed by a single expression platform. …”
Publicado 2016
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2“…[Image: see text] Recent work has proposed a new mechanism of bacterial iron regulation: riboswitches that undergo a conformational change in response to Fe(II). …”
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3“…BACKGROUND: Riboswitches are mRNA elements that change conformation when bound to small molecules. …”
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4por McCown, Phillip J., Corbino, Keith A., Stav, Shira, Sherlock, Madeline E., Breaker, Ronald R.“…Riboswitches are commonly used by bacteria to detect a variety of metabolites and ions to regulate gene expression. …”
Publicado 2017
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5“…In this article, we review synthetic cell-free riboswitches that function in both prokaryotic and eukaryotic cell-free systems reported to date to provide a current perspective on the state of cell-free riboswitch technologies and their limitations.…”
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6por Weigand, Julia E., Schmidtke, Sina R., Will, Tristan J., Duchardt-Ferner, Elke, Hammann, Christian, Wöhnert, Jens, Suess, Beatrix“…Our results explain for the first time the molecular mechanism of an engineered riboswitch.…”
Publicado 2011
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7por Vargas-Junior, Valdemir, Antunes, Deborah, Guimarães, Ana Carolina, Caffarena, Ernesto“…Riboswitches are RNA sensors affecting post-transcriptional processes through their ability to bind to small molecules. …”
Publicado 2022
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8“…Riboswitches are structured noncoding RNA domains used by many bacteria to monitor the concentrations of their target ligands and regulate gene expression accordingly. …”
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9“…Riboswitches are functional RNA elements that regulate gene expression by directly detecting metabolites. …”
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10“…New regulatory RNAs with complex structures have recently been discovered, among them the first catalytic riboswitch, a gene-regulatory RNA sequence with catalytic activity. …”
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11“…While characterization of natural and synthetic riboswitches has revealed that riboswitch function can be modulated through sequence alteration, no quantitative frameworks exist to investigate or guide riboswitch tuning. …”
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12“…The guanidine-II (mini-ykkC) riboswitch is the smallest of the guanidine-responsive riboswitches, comprising two stem loops of similar sequence. …”
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13“…Thus, this framework allows studying the function of natural riboswitches in silico. Moreover, it enables rationally designing artificial switches, combining essentially arbitrary sensors with a broad choice of read-out systems. …”
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14“…Riboswitches are structural elements found in mRNA molecules that couple small-molecule binding to regulation of gene expression, usually by controlling transcription or translation. …”
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15“…Riboswitches reside in the untranslated region of RNA and regulate genes involved in the biosynthesis of essential metabolites through binding of small molecules. …”
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16por Breaker, Ronald R.“…Over 55 distinct classes of riboswitches that respond to small metabolites or elemental ions have been experimentally validated to date. …”
Publicado 2022
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17por Procknow, Rebecca R., Kennedy, Kristopher J., Kluba, Maxwell, Rodriguez, Lesley J., Taga, Michiko E.“…Knowledge of these regulatory mechanisms allowed us to develop synthetic corrinoid riboswitches that convert repressing riboswitches to riboswitches that robustly induce gene expression in response to corrinoids. …”
Publicado 2023
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18por Procknow, Rebecca R., Kennedy, Kristopher J., Kluba, Maxwell, Rodriguez, Lesley J., Taga, Michiko E.“…Knowledge of these regulatory mechanisms allowed us to develop synthetic corrinoid riboswitches that convert repressing riboswitches to riboswitches that robustly induce gene expression in response to corrinoids. …”
Publicado 2023
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19por Shaver, Zachary M., Bent, Stephanie S., Bilby, Steven R., Brown, Michael, Buser, Anna, Cuellar, Itzayana G., Davis, Athena J., Doolan, Lindsay, Enriquez, Fatima C., Estrada, Autumn, Herner, Shelby, Herron, J. Cody, Hunn, Andrew M., Hunter, Madison, Johnston, Hartlee, Koucky, Owen, Mackley, Christian C., Maghini, Dylan, Mattoon, Devin, McDonald, Haden T., Sinks, Hannah, Sprague, Austin J., Sullivan, David, Tutar, Altan, Umphreys, Avery, Watson, Chris, Zweerink, Daniel, Heyer, Laurie J., Poet, Jeffrey L., Eckdahl, Todd T., Campbell, A. Malcolm“…OBJECTIVE: The purpose of this project was to use an in vivo method to discover riboswitches that are activated by new ligands. We employed phage-assisted continuous evolution (PACE) to evolve new riboswitches in vivo. …”
Publicado 2018
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20por Boussebayle, Adrien, Torka, Daniel, Ollivaud, Sandra, Braun, Johannes, Bofill-Bosch, Cristina, Dombrowski, Max, Groher, Florian, Hamacher, Kay, Suess, Beatrix“…The development of synthetic riboswitches has always been a challenge. Although a number of interesting proof-of-concept studies have been published, almost all of these were performed with the theophylline aptamer. …”
Publicado 2019
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