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581por Murphy, Kay E., Niederer, Heather A., King, Karen S., Harris, Elizabeth C., Glass, Sarah M., Cox, Charles J.“…We have shown that rs396991 can be genotyped by PCR amplification, followed by direct Sanger sequencing of the product, without coamplification of FCGR3B, and that the rs396991 TaqMan assay (C__25815666_10) agrees with Sanger sequencing results in 100% of European and Asian samples tested, but it has a small error rate in African and American populations. …”
Publicado 2015
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582“…This pool was obtained in a classical SELEX (Systematic Evolution of Ligands by EXponential enrichment) experiment using the FluMag-SELEX procedure followed by cloning and Sanger sequencing. PA#2/8 was identified as the only Protein A-binding aptamer from the Sanger sequence pool, and was shown to be able to bind intact cells of Staphylococcus aureus. …”
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583“…NGS was compared to traditional PCR and direct Sanger sequencing for its ability to detect Giardia species, assemblages, and mixed assemblage infections. …”
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584“…Meanwhile, multiplex polymerase chain reaction (mPCR) and mPCR-next-generation sequencing (mPCR-NGS) were used to detect BRCA1/2 genome. Sanger test was used for newly high virulent mutations to verify the correctness of mutagenic sites. …”
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585“…Availability: The executable and user manual can be freely downloaded from ftp://ftp.sanger.ac.uk/pub/zn1/HI. Contact: ql2@sanger.ac.uk…”
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586por Moorlag, Simone J. C. F. M., Coolen, Jordy P. M., van den Bosch, Bart, Jin, Elisabeth Hui-Mei, Buil, Jochem B., Wertheim, Heiman F. L., Melchers, Willem J. G.“…The results were compared to culture results, if available, and to the results of Sanger sequencing of the 16S rRNA gene (16S Sanger sequencing). …”
Publicado 2023
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587por Gazzola, Anna, Navari, Mohsen, Mannu, Claudia, Donelli, Riccardo, Etebari, Maryam, Piccaluga, Pier Paolo“…Conclusion: Overall, conventional Sanger sequencing and next-generation-sequencing-based clonality and somatic hypermutation analyses gave comparable results. …”
Publicado 2023
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588por Lepri, Francesca Romana, Scavelli, Rossana, Digilio, Maria Cristina, Gnazzo, Maria, Grotta, Simona, Dentici, Maria Lisa, Pisaneschi, Elisa, Sirleto, Pietro, Capolino, Rossella, Baban, Anwar, Russo, Serena, Franchin, Tiziana, Angioni, Adriano, Dallapiccola, Bruno“…Furthermore, all the newly detected mutations in patients from the training set have been confirmed by Sanger sequencing. Absence of any false negative event has been excluded by testing some of the negative patients, randomly selected, with Sanger sequencing. …”
Publicado 2014
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589por Jing, Changwen, Mao, Xuhua, Wang, Zhuo, Sun, Kejing, Ma, Rong, Wu, Jianzhong, Cao, Haixia“…Compared with Sanger sequencing, the total sensitivity and specificity of NGS assays was 95.24% (40/42) and 77.14% (54/70), respectively. …”
Publicado 2018
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590por Mahaweni, Niken M., Olieslagers, Timo I., Rivas, Ivan Olivares, Molenbroeck, Stefan J. J., Groeneweg, Mathijs, Bos, Gerard M. J., Tilanus, Marcel G. J., Voorter, Christina E. M., Wieten, Lotte“…Next, we performed a pilot with both Sanger sequencing and MinION based sequencing of 14 DNA samples which showed a good concordance between Sanger- and MinION sequencing. …”
Publicado 2018
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591por Kong, Xiangdong, Zhong, Xingjian, Liu, Lina, Cui, Siying, Yang, Yuxia, Kong, Lingrong“…MLPA results with single exon deletions were validated with PCR amplification and Sanger sequencing. The negative results of MLPA were further analysed with NGS and validated by Sanger sequencing. …”
Publicado 2019
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592por Surleac, Marius, Paraschiv, Simona, Nicolae, Ionelia, Banica, Leontina, Vlaicu, Ovidiu, Jipa, Raluca, Abagiu, Adrian, Otelea, Dan“…Next-generation sequencing (NGS) provides the possibility to detect drug resistance mutations with higher sensitivity than Sanger sequencing. The aim of this study was to search for transmitted drug resistance (TDR) mutations in strains from PWID recently diagnosed with HIV infection by parallel use of Sanger sequencing and NGS. …”
Publicado 2019
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593por Bauer, Peter, Kandaswamy, Krishna Kumar, Weiss, Maximilian E. R., Paknia, Omid, Werber, Martin, Bertoli-Avella, Aida M., Yüksel, Zafer, Bochinska, Malgorzata, Oprea, Gabriela E., Kishore, Shivendra, Weckesser, Volkmar, Karges, Ellen, Rolfs, Arndt“…PURPOSE: Next-generation sequencing (NGS) is rapidly replacing Sanger sequencing in genetic diagnostics. Sensitivity and specificity of NGS approaches are not well-defined, but can be estimated from applying NGS and Sanger sequencing in parallel. …”
Publicado 2018
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594por Chaemsaithong, Piya, Romero, Roberto, Pongchaikul, Pisut, Vivithanaporn, Pornpun, Lertrut, Waranyu, Jaovisidha, Adithep, Mongkolsuk, Paninee, Nitayanon, Perapon, Pongsuktavorn, Khontawan, Kamlungkuea, Threebhorn, Jung, Eunjung, Suksai, Manaphat, Singhsnaeh, Arunee, Jenjaroenpun, Piroon, Thaipisuttikul, Iyarit, Wongsurawat, Thidathip“…METHODS: Five cases of confirmed intra-amniotic infection, determined by either cultivation or 16S rDNA polymerase chain reaction (PCR) Sanger sequencing, and 10 cases of women who underwent mid-trimester genetic amniocentesis were included. …”
Publicado 2023
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595“…Genetic investigation was done by performing whole exome sequencing (WES) using DNA of the patients. Sanger sequencing was performed to validate WES findings and segregation analysis in the family. …”
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596por Mende, Daniel R., Waller, Alison S., Sunagawa, Shinichi, Järvelin, Aino I., Chan, Michelle M., Arumugam, Manimozhiyan, Raes, Jeroen, Bork, Peer“…We developed metagenomic read simulators with platform-specific (Sanger, pyrosequencing, Illumina) base-error models, and simulated metagenomes of differing community complexities. …”
Publicado 2012
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597por Morandi, Luca, de Biase, Dario, Visani, Michela, Cesari, Valentina, De Maglio, Giovanna, Pizzolitto, Stefano, Pession, Annalisa, Tallini, Giovanni“…All were analyzed by ASLNAqPCR and Sanger sequencing. Discordant cases were pyrosequenced. …”
Publicado 2012
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598por Wagner, Glauber, Jardim, Rodrigo, Tschoeke, Diogo A, Loureiro, Daniel R, Ocaña, Kary ACS, Ribeiro, Antonio CB, Emmel, Vanessa E, Probst, Christian M, Pitaluga, André N, Grisard, Edmundo C, Cavalcanti, Maria C, Campos, Maria LM, Mattoso, Marta, Dávila, Alberto MR“…BACKGROUND: The STINGRAY system has been conceived to ease the tasks of integrating, analyzing, annotating and presenting genomic and expression data from Sanger and Next Generation Sequencing (NGS) platforms. …”
Publicado 2014
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599por DiTommaso, Tia, Jones, Lynelle K., Cottle, Denny L., Gerdin, Anna-Karin, Vancollie, Valerie E., Watt, Fiona M., Ramirez-Solis, Ramiro, Bradley, Allan, Steel, Karen P., Sundberg, John P., White, Jacqueline K., Smyth, Ian M.“…To identify genes important in skin development and homeostasis, we have applied a high throughput, multi-parameter phenotype screen to the conditional targeted mutant mice generated by the Wellcome Trust Sanger Institute's Mouse Genetics Project (Sanger-MGP). …”
Publicado 2014
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600por Vattulainen, Sanna, Aho, Joonas, Salmenperä, Pertteli, Bruce, Siina, Tallila, Jonna, Gentile, Massimiliano, Sankelo, Marja, Laitinen, Tarja, Koskenvuo, Juha W, Alastalo, Tero-Pekka, Myllykangas, Samuel“…Our study validates the use of targeted OS-Seq for genetic diagnostics of PAH and revealed pathogenic variants that had been previously missed using Sanger sequencing.…”
Publicado 2015
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