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641por Tippabathani, Jayakrishna, Seenappa, Venu, Murugan, Alagupandian, Phani, Nagaraja Mahishi, Hampe, Mahesh H., Appaswamy, Giridharan, Sadashiv Gambhir, Prakash“…In this study, we used Sanger sequencing and MLPA in a reflex manner for molecular genetic analysis to confirm CYP21A2-mediated CAH. …”
Publicado 2023
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642“…The problems of metrological support of molecular genetic identification by Sanger DNA sequencing using fluorescent-labeled reaction terminators and capillary electrophoresis are considered. …”
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643por Fitzpatrick, Amy H., Rupnik, Agnieszka, O’Shea, Helen, Crispie, Fiona, Cotter, Paul D., Keaveney, Sinéad“…The method was then employed, and compared with Sanger sequencing, to characterize norovirus populations in naturally contaminated oysters. …”
Publicado 2023
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644por van Kampen, Jeroen J.A., Pham, Hanh Thi, Yoo, Sunbin, Overmars, Ronald J., Lungu, Cynthia, Mahmud, Rizwan, Schurink, Carolina A.M., van Boheemen, Sander, Gruters, Rob A., Fraaij, Pieter L.A., Burger, David M., Voermans, Jolanda J.C., Rokx, Casper, van de Vijver, David A.M.C., Mesplède, Thibault“…METHODS: Integrase sequencing was performed retrospectively by Sanger and next-generation sequencing. Rates of emergence and decline of resistance mutations were calculated using next-generation sequencing data. …”
Publicado 2022
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645por Shi, Jie, Tian, Lu, Sun, Tengyang, Zhang, Xiao, Xu, Ke, Xie, Yue, Peng, Xiaoyan, Tang, Xin, Jin, Zi-Bing, Li, Yang“…All patients underwent ophthalmic examinations and comprehensive genetic analyses, including Sanger DNA sequencing of BEST1 and whole genome sequencing (WGS). …”
Publicado 2023
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646por Bonnefond, Amélie, Durand, Emmanuelle, Sand, Olivier, De Graeve, Franck, Gallina, Sophie, Busiah, Kanetee, Lobbens, Stéphane, Simon, Albane, Bellanné-Chantelot, Christine, Létourneau, Louis, Scharfmann, Raphael, Delplanque, Jérôme, Sladek, Robert, Polak, Michel, Vaxillaire, Martine, Froguel, Philippe“…This diagnosis is currently based on Sanger sequencing of at least 42 PCR fragments from the KCNJ11, ABCC8, and INS genes. …”
Publicado 2010
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647por Lai, Isabella N., Yellore, Vivek S., Rayner, Sylvia A., D’Silva, Nerissa C., Nguyen, Catherine K., Aldave, Anthony J.“…PURPOSE: To identify the genetic basis of posterior polymorphous corneal dystrophy 1 (PPCD1) using next-generation sequencing (NGS) of the common PPCD1 support interval, in which Sanger sequencing failed to identify a pathogenic mutation. …”
Publicado 2010
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648por Blanca, Jose M, Pascual, Laura, Ziarsolo, Peio, Nuez, Fernando, Cañizares, Joaquin“…RESULTS: The ngs_backbone software is a parallel pipeline capable of analyzing Sanger, 454, Illumina and SOLiD (Sequencing by Oligonucleotide Ligation and Detection) sequence reads. …”
Publicado 2011
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649por Johansson, Stefan, Irgens, Henrik, Chudasama, Kishan K., Molnes, Janne, Aerts, Jan, Roque, Francisco S., Jonassen, Inge, Levy, Shawn, Lima, Kari, Knappskog, Per M., Bell, Graeme I., Molven, Anders, Njølstad, Pål R.“…Given the extensive genetic and clinical heterogeneity of diabetes, exome sequencing might provide additional diagnostic potential when standard Sanger sequencing-based diagnostics is inconclusive. …”
Publicado 2012
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650por Alexander, Alana, Steel, Debbie, Slikas, Beth, Hoekzema, Kendra, Carraher, Colm, Parks, Matthew, Cronn, Richard, Baker, C. Scott“…Resequencing of three individuals with both NGS platforms and partial Sanger sequencing showed low discrepancy rates (454-Illumina: 0.0071%; Sanger-Illumina: 0.0034%; and Sanger-454: 0.0023%) confirming suitability of both NGS platforms for investigating low mitogenomic diversity. …”
Publicado 2013
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651por Mook, Olaf R F, Haagmans, Martin A, Soucy, Jean-François, van de Meerakker, Judith B A, Baas, Frank, Jakobs, Marja E, Hofman, Nynke, Christiaans, Imke, Lekanne Deprez, Ronald H, Mannens, Marcel M A M“…Array based target enrichment followed by NGS showed the same accuracy as Sanger sequencing. Therefore, NGS is ready for implementation in a diagnostic setting.…”
Publicado 2013
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652por Lange, Vinzenz, Böhme, Irina, Hofmann, Jan, Lang, Kathrin, Sauter, Jürgen, Schöne, Bianca, Paul, Patrick, Albrecht, Viviane, Andreas, Johanna M, Baier, Daniel M, Nething, Jochen, Ehninger, Ulf, Schwarzelt, Carmen, Pingel, Julia, Ehninger, Gerhard, Schmidt, Alexander H“…All neXtype results were concordant with the Sanger sequences, demonstrating error-free typing of more than 6000 HLA loci. …”
Publicado 2014
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653por Benlloch, Susana, Botero, Maria Luisa, Beltran-Alamillo, Jordi, Mayo, Clara, Gimenez-Capitán, Ana, de Aguirre, Itziar, Queralt, Cristina, Ramirez, Jose Luis, Cajal, Santiago Ramón y., Klughammer, Barbara, Schlegel, Mariette, Bordogna, Walter, Chen, David, Zhang, Guili, Kovach, Barbara, Shieh, Felice, Palma, John F., Wu, Lin, Lawrence, H. Jeffrey, Taron, Miquel“…The EGFR PCR test demonstrated improved performance relative to Sanger sequencing.…”
Publicado 2014
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654por Gooskens, Jairo, Zevenhoven-Dobbe, Jessika C., Claas, Eric C., Kroes, Aloys C. M., Posthuma, Clara C.“…Routine surveillance specimens obtained from 70 patients with pH1N1 infection were evaluated for mutations associated with increased virulence (PB1-F2, PB2 and NS1 genes) or antiviral resistance (neuraminidase gene, NA) using MSCSA and Sanger sequencing. MSCSA and Sanger sequencing results revealed a high concordance (nucleotides >99%, SNPs ∼94%). …”
Publicado 2014
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655por Huddleston, John, Ranade, Swati, Malig, Maika, Antonacci, Francesca, Chaisson, Mark, Hon, Lawrence, Sudmant, Peter H., Graves, Tina A., Alkan, Can, Dennis, Megan Y., Wilson, Richard K., Turner, Stephen W., Korlach, Jonas, Eichler, Evan E.“…We sequenced and assembled BAC clones corresponding to a 1.3-Mbp complex region of chromosome 17q21.31, demonstrating 99.994% identity to Sanger assemblies of the same clones. We targeted 44 differences using Illumina sequencing and find that PacBio and Sanger assemblies share a comparable number of validated variants, albeit with different sequence context biases. …”
Publicado 2014
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656por Ming, Zizhen, Jiang, Dongxian, Hu, Qin, Li, Xiaojing, Huang, Jie, Xu, Yifan, Liu, Yalan, Xu, Chen, Hua, Xiuguo, Hou, Yingyong“…CONCLUSION: Sanger sequencing and pyrosequencing are less sensitive and are not efficiently applicable to the detection of PIK3CA mutation in EC samples. …”
Publicado 2014
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657“…Out of 112 insertion/deletion variants identified among 45 microsatellite amplicons in our study, we found 87.5% agreement between the 454-platform and Sanger sequencing in frequency of variant detection after Benjamini-Hochberg correction for multiple tests. …”
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658por DiVincenzo, Christina, Elzinga, Christopher D, Medeiros, Adam C, Karbassi, Izabela, Jones, Jeremiah R, Evans, Matthew C, Braastad, Corey D, Bishop, Crystal M, Jaremko, Malgorzata, Wang, Zhenyuan, Liaquat, Khalida, Hoffman, Carol A, York, Michelle D, Batish, Sat D, Lupski, James R, Higgins, Joseph J“…Deidentified results from sequencing assays and multiplex ligation-dependent probe amplification (MLPA) were analyzed including 100,102 Sanger sequencing, 2338 next-generation sequencing (NGS), and 21,990 MLPA assays. …”
Publicado 2014
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659por Abdelrahman, Tamer, Hughes, Joseph, Main, Janice, McLauchlan, John, Thursz, Mark, Thomson, Emma“…The diagnosis of reinfection has traditionally been based on direct Sanger sequencing of samples pre- and posttreatment, but not on more sensitive deep sequencing techniques. …”
Publicado 2015
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660por Løes, Inger Marie, Immervoll, Heike, Angelsen, Jon-Helge, Horn, Arild, Geisler, Jürgen, Busch, Christian, Lønning, Per Eystein, Knappskog, Stian“…In a dilution series of V600E-mutated DNA in wild-type DNA, the detection limit for the LightMix assay was 1:1000 mutated alleles while it was 1:10 for Sanger sequencing. In line with this, we detected 15 additional mutated melanoma samples and two additional mutated metastatic colorectal cancer samples by the LightMix assay compared to Sanger sequencing. …”
Publicado 2014
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