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8281por Li, Zhenfen, Pu, Zhangya, Yang, Ziyue, Zhu, Yuanyuan, Deng, Ying, Li, Ning, Peng, Fang“…The genomic and post-transcriptional alterations of TROAP in tumors were determined using the cBioPortal and SangerBox databases. Also, TISIDB was used to investigate the relationship between TROAP expression and tumor microenvironment(TME) among different cancer types. …”
Publicado 2022
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8282por Hamame, Afaf, Davoust, Bernard, Hasnaoui, Bouthaina, Mwenebitu, David Lupande, Rolain, Jean-Marc, Diene, Seydina M.“…All samples were cultured in a selective Lucie Bardet Jean-Marc Rolain (LBJMR) medium and colonies were identified using MALDI-TOF mass spectrometry and then antibiotic susceptibility tests were performed. PCR and Sanger sequencing were performed to screen for the presence of mcr genes. …”
Publicado 2022
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8283por Azzarà, Alessia, Risi Ambrogioni, Laura, Cassano, Ilaria, Lintas, Carla, Longo, Umile Giuseppe, Denaro, Vincenzo, Gurrieri, Fiorella“…Using the predictions in silico tools, the candidate variants were segregated by Sanger sequencing. Based on the risk of being damaging and on the potential role in rotator cuff etiopathogenesis, three candidate genes for rotator cuff tears were prioritized: COL23A1, EMILIN3 and HDAC10. …”
Publicado 2022
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8284por Sultan, Mutaz, Adawi, Mohammad, Kol, Nitzan, McCourt, Blake, Adawi, Ihda, Baram, Liran, Tal, Noa, Werner, Lael, Lev, Atar, Snapper, Scott B., Barel, Ortal, Konnikova, Liza, Somech, Raz, Shouval, Dror S.“…METHODS: Whole exome and Sanger sequencing was performed in two IBD patients. …”
Publicado 2022
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8285“…Next-generation sequencing (NGS) and Sanger sequencing further demonstrated a heterozygous nonsense variant (exon16, c.G1985A: p.W662X) in SLC4A1, inherited from his father. …”
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8286por Zeng, Huaping, Chen, Kexin, Ma, Chouxian, Zhu, Biyin, Chuan, Jun, Zhang, Shuan, Tang, Lin, Yang, Ting, Sun, Zhaohui, Yang, Xingkun, Wang, Yu“…PrimerScore2 was also used to design 77 monoplex Sanger sequencing primers, the sequencing results indicated that all the primers were effective.…”
Publicado 2022
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8287por Tavana, Nahid, Ting, Tzer Hwu, Lai, Kaitao, Kennerson, Marina L., Thilakavathy, Karuppiah“…METHODS: Whole exome sequencing (WES) was performed on all patients and their parents, followed by Sanger sequencing validation. Bioinformatics tools were used to provide supporting evidence for pathogenicity of variants. …”
Publicado 2022
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8288por Postigo-Hidalgo, Ignacio, Magassouba, N’Faly, Soropogui, Barré, Fichet-Calvet, Elisabeth, Drexler, Jan Felix“…The full polyprotein-encoding genes were retrieved by a combination of high throughput and Sanger sequencing from 17 samples showing sufficiently high viral loads. …”
Publicado 2022
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8289por de Pádua Covas Lage, Luís Alberto, Culler, Hebert Fabrício, Barreto, Guilherme Carneiro, Reichert, Cadiele Oliana, Levy, Débora, de Oliveira Costa, Renata, Rocha, Vanderson, Pereira, Juliana“…In this study, we conducted Sanger sequencing of formalin-fixed paraffin-embedded (FFPE) diagnostic tumor samples using a target-panel to search for recurrent mutations involving the IDH-1/IDH-2, TET-2, DNMT3A and RhoA genes in 59 cases of nMTCL. …”
Publicado 2022
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8290“…Methods: The characterization of circ_RNF13 was determined by Sanger sequencing, qRT-PCR, subcellular fractionation assay, and RNA FISH. …”
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8291por Weidinger, Pia, Kolodziejek, Jolanta, Camp, Jeremy V., Loney, Tom, Kannan, Dafalla O., Ramaswamy, Sathishkumar, Tayoun, Ahmad Abou, Corman, Victor M., Nowotny, Norbert“…The NGS sequence of the sheep‐derived MERS‐CoV was confirmed by conventional RT‐PCR of a part of the N gene and subsequent Sanger sequencing. All MERS‐CoV sequences clustered within clade B, lineage 5. …”
Publicado 2021
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8292por Trevisan, Giovani, Zeller, Michael, Li, Ganwu, Zhang, Jianqiang, Gauger, Phillip, Linhares, Daniel C.L.“…The open reading frames (ORF)5 represents approximately 4% of the porcine reproductive and respiratory syndrome virus (PRRSV)‐2 genome (whole‐PRRSV) and is often determined by the Sanger technique, which rarely detects >1 PRRSV strain if present in the sample. …”
Publicado 2022
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8293por Shetty, Omshree, Vengurlekar, Vaibhavi, Kapoor, Akhil, Kamble, Vishakha, Gurav, Mamta, Bhargava, Prabhat, Srinivas, Sujay, Ramaswamy, Anant, Ramadwar, Mukta, Saklani, Avanish P., Desouza, Ashwin, Ostwal, Vikas“…PIK3CA (exon 9 and 20) and RAS ( KRAS & NRAS ) was performed on representative formalin-fixed paraffin-embedded tissues by Sanger sequencing. Results were correlated with clinicopathological features. …”
Publicado 2022
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8294por Yu, Chih-Hsiang, Chang, Ya-Hsuan, Wang, Der-Shiun, Jou, Shiann-Tarng, Lin, Chien-Yu, Lin, Kai-Hsin, Lu, Meng-Yao, Wu, Kang-Hsi, Cheng, Chao-Neng, Chang, Hsiu-Hao, Chou, Shu-Wei, Su, Min-Yu, Ni, Yu-Ling, Xu, Pei-Yuan, Lin, Dong-Tsamn, Lin, Shu-Wha, Chen, Hsuan-Yu, Yang, Yung-Li“…Although rare, compound heterozygous mutations also occur, with the two variants on different alleles (NUDT15*3/*6), which may confer tolerance to considerably lesser mercaptopurine dosage. Sanger sequencing or pyrosequencing can determine the NUDT15 variants but not the phase. …”
Publicado 2023
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8295por Haddad-Boubaker, Sondes, Arbi, Marwa, Souiai, Oussema, Chouikha, Anissa, Fares, Wasfi, Edington, Kate, Sims, Sam, Camma, Cesare, Lorusso, Alessio, Diagne, Moussa Moïse, Diallo, Amadou, Boubaker, Ilhem Boutiba Ben, Ferjani, Sana, Mastouri, Maha, Mhalla, Salma, Karray, Hela, Gargouri, Saba, Bahri, Olfa, Trabelsi, Abdelhalim, Kallala, Ouafa, Hannachi, Naila, Chaabouni, Yassine, Smaoui, Hanen, Meftah, Khaoula, Bouhalila, Sophia Besbes, Foughali, Soumaya, Zribi, Mariem, Lamari, Asma, Touzi, Henda, Safer, Mouna, Alaya, Nissaf Ben, Kahla, Alia Ben, Gdoura, Mariem, Triki, Henda“…METHODS: Viral whole genome and partial S-segment sequencing was performed using Illumina and Sanger platforms, respectively and lineage assignemnt was assessed using Pangolin version 1.2.4 and scorpio version 3.4.X. …”
Publicado 2023
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8296por Karlowsky, James A., Hackel, Meredith A., Wise, Mark G., Six, David A., Uehara, Tsuyoshi, Daigle, Denis M., Cusick, Susan M., Pevear, Daniel C., Moeck, Greg, Sahm, Daniel F.“…Isolates with cefepime-taniborbactam MICs of ≥16 μg/mL underwent whole-genome sequencing. β-lactamase genes were identified in meropenem-resistant isolates by PCR/Sanger sequencing. Against Enterobacterales, taniborbactam reduced the cefepime MIC(90) value by >64-fold (from >16 to 0.25 μg/mL). …”
Publicado 2022
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8297por Lee, Chi Chiu, Ye, Rui, Tubbs, Justin D., Baum, Larry, Zhong, Yuanxin, Leung, Shuk Yan Joey, Chan, Sheung Chun, Wu, Kit Ying Kitty, Cheng, Po Kwan Jamie, Chow, Lai Ping, Leung, Patrick W. L., Sham, Pak Chung“…Bioinformatic tools were used to identify SVs from the long sequencing reads, with confirmation of findings in probands by short-read Illumina sequencing, Sanger sequencing and visual manual validation with Integrated Genome Browser. …”
Publicado 2023
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8298por Qian, Pei, Bao, Ying, Huang, Hui-mei, Suo, Lei, Han, Yan, Li, Zhi-juan, Zhang, Min“…He was evaluated by renal biopsy,whole-exome sequencing (WES) and whole-genome sequencing (WGS) for Alport syndrome. RT-PCR and cDNA Sanger sequencing were performed on RNA extracted from the skin of the proband. …”
Publicado 2023
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8299por Santodomingo, Adriana, Thomas, Richard, Robbiano, Sofía, Uribe, Juan E., Parragué-Migone, Catalina, Cabello-Stom, Javier, Vera-Otarola, Frank, Valencia-Soto, Carola, Moreira-Arce, Darío, Hidalgo-Hermoso, Ezequiel, Muñoz-Leal, Sebastián“…METHODS: Using PCR protocols and Sanger sequencing, we assessed the presence of Anaplasma spp. in blood and ticks collected on a native deer species (Pudu puda) from southern Chile. …”
Publicado 2023
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8300por Padilla-Blanco, Miguel, Gucciardi, Francesca, Rubio, Vicente, Lastra, Antonio, Lorenzo, Teresa, Ballester, Beatriz, González-Pastor, Andrea, Veses, Veronica, Macaluso, Giusi, Sheth, Chirag C., Pascual-Ortiz, Marina, Maiques, Elisa, Rubio-Guerri, Consuelo, Purpari, Giuseppa, Guercio, Annalisa“…Our data revealed wide prevalence of the then widespread through Europe B.1.177 variant, although some viral samples could not be classified with the limited Sanger sequencing tools used. A particularly interesting sample could not be fitted to a major variant then circulating in Europe and has been subjected here to full genome sequencing in an attempt to clarify its origin, lineage and relations with the seven full genome sequences deposited for that period in Sicily, hoping to provide clues on viral evolution. …”
Publicado 2023
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