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8441por Yoshida, Kazuhiro, Nagasaka, Takeshi, Umeda, Yuzo, Tanaka, Takehiro, Kimura, Keisuke, Taniguchi, Fumitaka, Fuji, Tomokazu, Shigeyasu, Kunitoshi, Mori, Yoshiko, Yanai, Hiroyuki, Yagi, Takahito, Goel, Ajay, Fujiwara, Toshiyoshi“…Mutations in the KRAS or GNAS genes were analyzed by Sanger sequencing, and methylation status of two discrete regions within the EFEMP1 promoter, namely region 1 and region 2, was analyzed by bisulfite sequencing and fluorescent high-sensitive assay for bisulfite DNA (Hi-SA). …”
Publicado 2016
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8442por Young, Andrew Donovan, Lemmon, Alan R., Skevington, Jeffrey H., Mengual, Ximo, Ståhls, Gunilla, Reemer, Menno, Jordaens, Kurt, Kelso, Scott, Lemmon, Emily Moriarty, Hauser, Martin, De Meyer, Marc, Misof, Bernhard, Wiegmann, Brian M.“…Once a probe kit is developed, anchored hybrid enrichment is superior to traditional PCR-based Sanger sequencing in terms of both the amount of genomic data that can be recovered and effective cost. …”
Publicado 2016
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8443por Liu, Zhijian, Yang, Shixing, Wang, Yan, Shen, Quan, Yang, Yan, Deng, Xutao, Zhang, Wen, Delwart, Eric“…KX082661), was detected in one sample and its complete genome sequence was amplified by PCR and sequenced by Sanger walking. Phylogenetic analyses based on the complete genome and the L1 protein of HPV-ZJ01 and other representative human papillomaviruses were done, respectively. …”
Publicado 2016
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8444por Haliloglu, Belma, Hysenaj, Gerald, Atay, Zeynep, Guran, Tulay, Abalı, Saygın, Turan, Serap, Bereket, Abdullah, Ellard, Sian“…A MODY probability score (www.diabetesgenes.org) was calculated and 21 patients with a score ≥75%, HbA1c levels ≤7·5% (58·5 mmol/mol) and fasting blood glucose (FBG) levels 99–145 mg/dl (5·5–8·0 mmol/l) were selected for Sanger sequencing of the GCK gene. Targeted next‐generation sequencing for all known monogenic diabetes genes was undertaken for any patient without a GCK gene mutation. …”
Publicado 2016
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8445por Araujo, Thaís Fenz, Ribeiro, Erlane Marques, Arruda, Anderson Pontes, Moreno, Carolina Araujo, de Medeiros, Paula Frassinetti Vasconcelos, Minillo, Renata Moldenhauer, Melo, Débora Gusmão, Kim, Chong Ae, Doriqui, Maria Juliana Rodovalho, Felix, Têmis Maria, Fock, Rodrigo Ambrosio, Cavalcanti, Denise Pontes“…METHODS: The CTSK gene was sequenced by the Sanger method in the patients and their parents. In addition to 18 families from Ceará, this study also included 15 families from other Brazilian regions. …”
Publicado 2016
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8446por Sosa-Jurado, Francisca, Hilda Rosas-Murrieta, Nora, Guzman-Flores, Belinda, Perez Zempoaltecalt, Cintia, Patricia Sanchez Torres, Ana, Ramirez Rosete, Leticia, Bernal-Soto, Maribel, Marquez-Dominguez, Luis, Melendez-Mena, Daniel, Angel Mendoza Torres, Miguel, Teresa Lopez Delgado, Maria, Reyes-Leyva, Julio, Vallejo-Ruiz, Veronica, Santos-Lopez, Gerardo“…For the detection of HBV DNA, a nested polymerase chain reaction (nested PCR) was used and the genotypes were determined using Sanger sequencing. RESULTS: Of the 120,552 blood donors, 1437 (1.19%, 95% CI: 1.12 - 1.26) were reactive to anti-HBc, while 82 (0.066%, 95% CI: 0.053 - 0.079) were reactive to HBsAg. …”
Publicado 2016
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8447por Moussavou, Pamela Boundzanga, Koumakpayi, Ismaël Hervé, Nkili-Meyong, Andriniaina Andy, Labouba, Ingrid, Bisvigou, Ulrich, Chansi, Junie K., Engohan-Aloghe, Corinne, Dissanami, Frederic, Ambounda, Nathalie, Delannoy-Vieillard, Anne-Sophie, Diancourt, Laure, Nkoghe, Dieudonne, Leroy, Eric M., Belembaogo, Ernest, Berthet, Nicolas“…For isolates of the HPV16 genotype, the E6 gene and the long control region (LCR) were directly sequenced using Sanger method. RESULTS: The study included 87 women who showed a positive VIA/VILI result. …”
Publicado 2016
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8448por Jimenez-Sousa, María Ángeles, Gutiérrez-Rivas, Mónica, Álvaro-Meca, Alejandro, García-Álvarez, Mónica, Harrigan, P. Richard, Fedele, Cesare Giovanni, Briz, Verónica, Vázquez-Morón, Sonia, Resino, Salvador“…The viral NS3 protease gene was amplified by nested polymerase chain reaction and sequenced by Sanger sequencing using an ABI PRISM 377 DNA sequencer. …”
Publicado 2016
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8449por Mzingwane, M. L., Tiemessen, C. T., Richter, K. L., Mayaphi, S. H., Hunt, G., Bowyer, S. M.“…METHODS: Patient’s records of viral load results and CD4 cell counts from routine treatment monitoring were used and additional pre-treatment blood samples for Sanger sequencing were obtained. A selection of pre-treatment samples from individuals who experienced virological failure were evaluated for minority resistance associated mutations to 1 % prevalence and compared to individuals who achieved viral suppression. …”
Publicado 2016
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8450por Avila-Ríos, Santiago, García-Morales, Claudia, Matías-Florentino, Margarita, Tapia-Trejo, Daniela, Hernández-Álvarez, Bismarck F., Moreira-López, Sumaya E., Quant-Durán, Carlos J., Porras-Cortés, Guillermo, Reyes-Terán, Gustavo“…HIV pol sequences were obtained at a WHO-accredited laboratory in Mexico by Sanger and next generation sequencing (NGS). PDR was assessed using the WHO surveillance drug resistance mutation (SDRM) list and the Stanford HIVdb tool. …”
Publicado 2016
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8451por Yin, Yuxin, Lan, James H., Nguyen, David, Valenzuela, Nicole, Takemura, Ping, Bolon, Yung-Tsi, Springer, Brianna, Saito, Katsuyuki, Zheng, Ying, Hague, Tim, Pasztor, Agnes, Horvath, Gyorgy, Rigo, Krisztina, Reed, Elaine F., Zhang, Qiuheng“…All homozygous alleles were confirmed by Luminex SSO typing and exon novelties were confirmed by Sanger sequencing. RESULTS: Using this automated workflow, over 10,063 NMDP registry donors were successfully typed under high-resolution by NGS. …”
Publicado 2016
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8452por Henmyr, V., Carlberg, D., Manderstedt, E., Lind-Halldén, C., Säll, T., Cardell, L. O., Halldén, C.“…The present study aims to describe the genetic variation of the promoter and coding sequences of the 10 TLR genes in 288 AR patients. METHODS: Sanger sequencing and Ion Torrent next-generation sequencing was used to identify polymorphisms in a Swedish AR population and these were subsequently compared and evaluated using 1000Genomes and Exome Aggregation Consortium (ExAC) data. …”
Publicado 2017
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8453por Artaza-Irigaray, Cristina, Flores-Miramontes, María Guadalupe, Olszewski, Dominik, Magaña-Torres, María Teresa, López-Cardona, María Guadalupe, Leal-Herrera, Yelda Aurora, Piña-Sánchez, Patricia, Jave-Suárez, Luis Felipe, Aguilar-Lemarroy, Adriana“…On the other hand, nucleotide changes in L1, E6 and E7 genes were determined using PCR, Sanger sequencing and analysis with the CLC-MainWorkbench 7.6.1 software. …”
Publicado 2017
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8454por Tang, Fengzhu, Ma, Dengke, Wang, Yulan, Qiu, Yuecai, Liu, Fei, Wang, Qingqing, Lu, Qiutian, Shi, Min, Xu, Liang, Liu, Min, Liang, Jianping“…Furthermore, we employed Sanger sequencing to confirm the mutations in each subject. …”
Publicado 2017
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8455por Bartram, Malte P., Mishra, Tripti, Reintjes, Nadine, Fabretti, Francesca, Gharbi, Hakam, Adam, Alexander C., Göbel, Heike, Franke, Mareike, Schermer, Bernhard, Haneder, Stefan, Benzing, Thomas, Beck, Bodo B., Müller, Roman-Ulrich“…Mutations in the FLCN gene are the cause of Birt-Hogg-Dubé syndrome, a rare tumor syndrome which is characterized by the combination of renal cell carcinoma, pneumothorax and skin tumors. METHODS: Using Sanger sequencing we identify a heterozygous splice-site mutation in FLCN in lymphocyte DNA of a patient suffering from renal cell carcinoma. …”
Publicado 2017
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8456por Crainey, James L., Hurst, Jacob, Lamberton, Poppy H. L., Cheke, Robert A., Griffin, Claire E., Wilson, Michael D., de Araújo, Cláudia P. Mendes, Basáñez, María-Gloria, Post, Rory J.“…Using Roche 454 shot-gun and Sanger sequencing, we have resolved >32 kb of WO prophage sequence into three contigs representing three distinct prophage elements. …”
Publicado 2017
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8457por Bassano, Irene, Ong, Swee Hoe, Lawless, Nathan, Whitehead, Thomas, Fife, Mark, Kellam, Paul“…Recently, a new chicken reference genome assembly Gallus Gallus v5 was generated using Sanger, 454, Illumina and PacBio sequencing technologies identifying considerable differences in the chIFITM locus over the previous genome releases. …”
Publicado 2017
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8458por Deepha, Sekar, Vengalil, Seena, Preethish-Kumar, Veeramani, Polavarapu, Kiran, Nalini, Atchayaram, Gayathri, Narayanappa, Purushottam, Meera“…Next Generation Sequencing or targeted Sanger sequencing on a case by case basis might improve phenotype- genotype correlation. …”
Publicado 2017
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8459por Ajmal, Muhammad, Mir, Asif, Shoaib, Muhammad, Malik, Salman Akbar, Nasir, Muhammad“…Amplified PCR products were then subjected to Sanger sequencing and RFLP analysis to identify a potentially pathogenic mutation. …”
Publicado 2017
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8460por Takai-Igarashi, Takako, Kinoshita, Kengo, Nagasaki, Masao, Ogishima, Soichi, Nakamura, Naoki, Nagase, Sachiko, Nagaie, Satoshi, Saito, Tomo, Nagami, Fuji, Minegishi, Naoko, Suzuki, Yoichi, Suzuki, Kichiya, Hashizume, Hiroaki, Kuriyama, Shinichi, Hozawa, Atsushi, Yaegashi, Nobuo, Kure, Shigeo, Tamiya, Gen, Kawaguchi, Yoshio, Tanaka, Hiroshi, Yamamoto, Masayuki“…The proposed policy refers to that of NCBI and that of the Sanger Institute. The proposed policy classifies shared data according to the strength of re-identification risks. …”
Publicado 2017
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