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8901“…Then, we validated these correlations using a well-characterized set of samples and locus-specific approaches—i.e., Sanger sequencing for the genotype, cloning/sequencing and pyrosequencing for the DNA methylation, and allele-specific and real-time PCR for the RNA expression. …”
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8902por Oussalah, Abderrahim, Jeannesson-Thivisol, Elise, Chéry, Céline, Perrin, Pascal, Rouyer, Pierre, Josse, Thomas, Cano, Aline, Barth, Magalie, Fouilhoux, Alain, Mention, Karine, Labarthe, François, Arnoux, Jean-Baptiste, Maillot, François, Lenaerts, Catherine, Dumesnil, Cécile, Wagner, Kathy, Terral, Daniel, Broué, Pierre, De Parscau, Loic, Gay, Claire, Kuster, Alice, Bédu, Antoine, Besson, Gérard, Lamireau, Delphine, Odent, Sylvie, Masurel, Alice, Rodriguez-Guéant, Rosa-Maria, Feillet, François, Guéant, Jean-Louis, Namour, Fares“…METHODS: The French nationwide PKU study included patients who have been referred at the national level to the University Hospital of Nancy, and for whom a molecular diagnosis of phenylketonuria was made by Sanger sequencing. We performed enrichment analyses by comparing alternative allele frequencies using Fisher's exact test with Bonferroni adjustment. …”
Publicado 2020
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8903por Li, Bin, Lu, Bin, Guo, Xuewen, Hu, Shenghui, Zhao, Guihu, Huang, Weihong, Hu, Jianzhong, Song, Kun“…Whole exon sequencing was employed for screening the disease-causing gene mutations in the proband, and Sanger sequencing was used for other members of the family and a control group of 500 healthy individuals. …”
Publicado 2020
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8904“…Genetic analysis using targeted next generation sequencing (NGS) panel, Sanger sequencing, and segregation analyses revealed a compound heterozygous mutation, c.991G > T (p.D331Y)/c.1077G > A (M358IfsX), in PLA2G6. …”
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8905por Abolhassani, Hassan, El-Sherbiny, Yasser M., Arumugakani, Gururaj, Carter, Clive, Richards, Stephen, Lawless, Dylan, Wood, Philip, Buckland, Matthew, Heydarzadeh, Marzieh, Aghamohammadi, Asghar, Hambleton, Sophie, Hammarström, Lennart, Burns, Siobhan O, Doffinger, Rainer, Savic, Sinisa“…METHODS: A combination of whole exome and Sanger sequencing was used to identify novel mutations. …”
Publicado 2019
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8906por Hao, Mingju, Shi, Xiaohong, Lv, Jingnan, Niu, Siqiang, Cheng, Shiqing, Du, Hong, Yu, Fangyou, Tang, Yi-Wei, Kreiswirth, Barry N., Zhang, Haifang, Chen, Liang“…Multilocus Sequence typing (MLST), molecular capsule typing (wzi sequencing) and antimicrobial resistance genes were examined by PCR and Sanger sequencing. Pulsed-field gel electrophoresis and next generation sequencing were conducted on selected isolates. …”
Publicado 2020
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8907por Ohata, Y., Takeyari, S., Nakano, Y., Kitaoka, T., Nakayama, H., Bizaoui, V., Yamamoto, K., Miyata, K., Yamamoto, K., Fujiwara, M., Kubota, T., Michigami, T., Yamamoto, K., Yamamoto, T., Namba, N., Ebina, K., Yoshikawa, H., Ozono, K.“…The mutation spectrum in Japanese patients with OI has not been comprehensively analyzed, as it is difficult to identify using classical Sanger sequencing. In this study, we aimed to reveal the mutation spectrum and genotype-phenotype correlations in Japanese patients with OI using next-generation sequencing (NGS). …”
Publicado 2019
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8908por Cansado-Utrilla, Cintia, Jeffries, Claire L., Kristan, Mojca, Brugman, Victor A., Heard, Patrick, Camara, Gnepou, Sylla, Moussa, Beavogui, Abdoul H., Messenger, Louisa A., Irish, Seth R., Walker, Thomas“…Species identification was confirmed using PCR-based analysis and Sanger sequencing. RESULTS: A total of 10,610 mosquitoes were captured across five traps. …”
Publicado 2020
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8909por Giacomelli, Andrea, Micheli, Valeria, Cattaneo, Dario, Mancon, Alessandro, Gervasoni, Cristina“…Phylogenetic analysis of next-generation sequences (used to investigate the presence of minor viral variants), the PR and RT sequences from plasma HIV RNA and pro-viral DNA extracted from peripheral blood mononuclear cells during the viral rebound, and a Sanger sequence obtained during a previous virological failure suggested clonal viral expression because the previous PR resistance mutations had been lost or had not been archived in pro-viral DNA. …”
Publicado 2020
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8910por Ho, Thuong Thi, Tran, Linh Huyen, Hoang, Lan Thu, Doan, Phuong Kim Thi, Nguyen, Trang Thi, Nguyen, Trang Hong, Tran, Hoai Thu, Hoang, Ha, Chu, Ha Hoang, Luong, Anh Lan Thi“…The patient was diagnosed with autosomal dominant MED using molecular testing in the order of the coding sequences and flanking sequences of five genes: COMP (exons 8–19), MATN3 (exon 2), COL9A2 (exon 3), COL9A3 (exon 3), COL9A1 (exon 8) by Sanger sequencing. A novel heterozygous missense variant (c.572 C > A, p.A191D) in MATN3 was identified in this family, which were not inherited from parents. …”
Publicado 2020
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8911por Li, Lin, Feng, Fan, Zhao, Minying, Li, Tengyan, Yue, Wentao, Ma, Xu, Wang, Binbin, Yin, Chenghong“…METHODS: Whole-exome sequencing (WES) was performed. Sanger sequencing was carried out to validate the variant in the proband and her mother. …”
Publicado 2020
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8912por Yuan, Haiming, Wang, Qingming, Li, Yufeng, Cheng, Shuangxi, Liu, Jianxin, Liu, Yanhui“…Using whole-exome sequencing (WES), we identified three variants: (1) SLC6A1, NM_003042.4: c.881-883del (p.Phe294del), (2) NOTCH1, NM_017617.5:c.1100-2A > G and (3) PRIMPOL, NM_152683.4:c.265 T > G (p.Tyr89Asp). Parental Sanger sequencing confirmed that SLC6A1 and NOTCH1 variants were de novo, whereas the PRIMPOL variant was inherited from the father who also had high myopia. …”
Publicado 2020
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8913“…The mutations of SRF were detected and validated by Sanger sequencing. The affection of the mutations on wild-type protein was analyzed by in silico softwares. …”
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8914por Ueda, Masako, McIntyre, Adam D, Remaley, Alan T, Hegele, Robert A, Rader, Daniel J“…Next-generation sequencing (NGS) with the LipidSeq panel, targeting causal genes for lipodystrophy, and monogenic HTG was performed, and confirmed by Sanger sequencing. Also, unweighted TG-polygenic scores by summing the number of TG-raising alleles from 14 single nucleotide polymorphisms (SNPs) associated with TG levels were assessed. …”
Publicado 2020
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8915por Ahn, Moon Bae, Lee, Yoon Ji, Lee, Na Yeong, Kim, Seul Ki, Kim, Shin Hee, Cho, Won Kyoung, Cho, Kyoung Soon, Jung, Min Ho, Suh, Byung Kyu“…We report a neonate with transient NDM with both EIF2AK3 and PTF1A variants confirmed by Sanger sequencing where each parent found to be a heterozygous carrier of each mutation. …”
Publicado 2020
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8916“…We identified and confirmed the homozygous pathogenic variant p.Arg386Gln in SLC29A3 using whole exome sequencing and sanger capillary electrophoresis.Conclusion: In summary, we show that a homozygous change in exon 6 of SCL29A3 (NM_00074; c.1157G>A; pArg386Gln) results in a phenotype of Dysosteosclerosis, adding a case to the small group of patients were pathogenic variants in this gene have been described causing sclerosing bone dysplasias with hallmarks of dysosteosclerosis. …”
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8917por de Paula, Leila Pedroso, Gomes, Nathalia Lisboa, Czepielewski, Mauro Antonio, De Mendonca, Berenice Bilarinho“…A deleterious variant (c.131_212delinsTGAGACCTGTACCGT) in NR5OB1 gene was identified by Sanger sequencing in hemizygous state in the 46,XY affected patients.Conclusion: Albeit a rare disease, it is crucial that endocrinologist all around the World could be aware about clinical characteristics of this condition in order to properly diagnose it. …”
Publicado 2020
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8918por Mantovani, Vilma, Bin, Sofia, Graziano, Claudio, Capelli, Irene, Minardi, Raffaella, Aiello, Valeria, Ambrosini, Enrico, Cristalli, Carlotta Pia, Mattiaccio, Alessandro, Pariali, Milena, De Fanti, Sara, Faletra, Flavio, Grosso, Enrico, Cantone, Rachele, Mancini, Elena, Mencarelli, Francesca, Pasini, Andrea, Wischmeijer, Anita, Sciascia, Nicola, Seri, Marco, La Manna, Gaetano“…Furthermore, our NGS protocol allowed the identification of two patients with somatic mosaicism, which was undetectable with Sanger sequencing. Among patients without PKD1/PKD2 variants, we identified three with possible alternative diagnosis: a patient with biallelic mutations in PKHD1, confirming the overlap between recessive and dominant PKD, and two patients with variants in ALG8 and PRKCSH, respectively. …”
Publicado 2020
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8919“…Three SNPs i.e. rs3917853, rs3917854, rs3917855 were genotyped by Sanger sequencing. Construction of haplotypes was performed using PHASE software. …”
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8920por Gikunju, Stella Wanjiku, Agola, Eric L., Ondondo, Raphael Omusebe, Kinyua, Johnson, Kimani, Francis, LaBeaud, Angelle Desiree, Malhotra, Indu, King, Charles, Thiong’o, Kelvin, Mutuku, Francis“…Archived red blood cells were processed for molecular characterization of SP resistance markers within the Pfdhfr and Pfdhps genes using real time PCR platform and Sanger sequencing. RESULTS: All samples had at least one mutation in the genes associated with drug resistance; polymorphism prevalence of Pfdhfr51I, 59R and 108N was at 88.7%, 78.3% and 93.4%, respectively, while Pfdhps polymorphism accounted for 94.3% and 91.5% at 437G and 540E, respectively. …”
Publicado 2020
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