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8961“…Potential variants were further confirmed using manual curation and validated using Sanger sequencing. RESULTS: In this cohort, the major classification variant was missense_mutation, the major variant type was single nucleotide polymorphism (SNP), and the major single nucleotide variation was C > T. …”
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8962por Diarra, Youssouf, Koné, Oumar, Sangaré, Lansana, Doumbia, Lassina, Haidara, Dade Bouye Ben, Diallo, Mouctar, Maiga, Ababacar, Sango, Hamadoun A., Sidibé, Halidou, Mihigo, Jules, Nace, Douglas, Ljolje, Dragan, Talundzic, Eldin, Udhayakumar, Venkatachalam, Eckert, Erin, Woodfill, Celia J., Moriarty, Leah F., Lim, Pharath, Krogstad, Donald J., Halsey, Eric S., Lucchi, Naomi W., Koita, Ousmane A.“…Known markers of resistance in the Pfk13, Pfmdr1, and Pfcrt genes were assessed using Sanger sequencing. RESULTS: A total of 449 patients were enrolled: 225 in the AL group and 224 in the ASAQ group. …”
Publicado 2021
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8963por Yang, Sherry X., Hollingshead, Melinda, Rubinstein, Larry, Nguyen, Dat, Larenjeira, Angelo B. A., Kinders, Robert J., Difilippantonio, Michael, Doroshow, James H.“…Gene mutations in cell lines were examined by whole exome and/or Sanger sequencing. Specific gene expression was measured in cells and xenograft tumor samples by Western blotting and immunohistochemistry. …”
Publicado 2021
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8964por Yan, Wei, Zhang, Bin, Wang, Huijun, Mo, Ran, Jiang, Xingyuan, Qin, Wen, Ma, Lin, Lin, Zhimiao“…RESULTS: We performed whole-exome sequencing (WES) and Sanger sequencing to detect underlying somatic mutations in the skin lesion of the patient. …”
Publicado 2021
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8965por Gu, Chunyan, Wang, Wang, Tang, Xiaozhu, Xu, Tingting, Zhang, Yanxin, Guo, Mengjie, Wei, Rongfang, Wang, Yajun, Jurczyszyn, Artur, Janz, Siegfried, Beksac, Meral, Zhan, Fenghuang, Seckinger, Anja, Hose, Dirk, Pan, Jingxuan, Yang, Ye“…The existence of circCHEK1_246aa was evaluated by qPCR, Sanger sequencing and Mass Spectrometer. RESULTS: We demonstrated that CHEK1 expression was significantly increased in human MM samples relative to normal plasma cells, and that in MM patients, high CHEK1 expression was associated with poor outcomes. …”
Publicado 2021
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8966“…Polymerase Chain Reaction (PCR) and Sanger sequencing techniques were performed to identify the mutational status of BRAF, NRAS, KRAS, NF1, KIT, PDGFRA and SF3B1 on 19 melanomas of the female genital tract, paired with 25 cutaneous melanomas, 18 acral melanomas and 11 melanomas of nasal cavity. …”
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8967por Xu, Jin, Yan, Qing, Song, Chengcheng, Liang, Jingjia, Zhao, Liang, Zhang, Xin, Weng, Zhenkun, Xu, Cheng, Liu, Qian, Xu, Shuqin, Pang, Lu, Zhang, Liye, Sun, Yuan, Wang, Gang, Gu, Aihua“…Genetic screening was performed by whole exome sequencing (WES) and confirmed by Sanger sequencing. Functional annotation, conservation and structural analysis were predicted in public database. …”
Publicado 2021
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8968por Pawełczyk, Agnieszka, Bednarska, Małgorzata, Hamera, Adrianna, Religa, Emilia, Poryszewska, Milena, Mierzejewska, Ewa J., Welc-Falęciak, Renata“…Pathogen identity was confirmed by Sanger sequencing or PCR–restriction fragment length polymorphism analysis. …”
Publicado 2021
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8969por Qin, Lin, Huo, Fengmin, Ren, Weicong, Shang, Yuanyuan, Yao, Cong, Zhang, Xuxia, Liu, Rongmei, Ma, Liping, Gao, Mengqiu, Pang, Yu“…Notably, false-positive results obtained for the very low bacterial load group led to markedly reduced positive predictive value of Xpert MTB/RIF to provide correct RIF-resistance predictions for that group (67.1%, 95% CI: 56.1%–78.1%5) relative to the predictive value obtained for all other groups combined (about 90%, P<0.05). Sanger sequencing data obtained for 20 (32.8%) MTB isolates deemed RIF-resistant via Xpert (Probe E) lacked rpoB RRDR mutations. …”
Publicado 2021
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8970por Alharazy, Shatha, Naseer, Muhammad Imran, Alissa, Eman, Robertson, M. Denise, Lanham-New, Susan, Alqahtani, Mohammad H., Chaudhary, Adeel G.“…SNPs in selected vitD related genes (rs4588 in GC, c.1364G > T with transcript ID: NM_001204307.1 and rs7041 in GC, c.1353A > C with transcript ID NM_001204307.1 and rs12794714 in CYP2R1, c.177G > A with transcript ID NM_024514.4) were determined in DNA samples using Sanger DNA sequencing. RESULTS: Minor allele frequency for rs4588, rs7041 and rs12794714 were 0.25, 0.44 and 0.42 respectively. …”
Publicado 2021
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8971Novel variants in helicase for meiosis 1 lead to male infertility due to non-obstructive azoospermiapor Tang, Dongdong, Lv, Mingrong, Gao, Yang, Cheng, Huiru, Li, Kuokuo, Xu, Chuan, Geng, Hao, Li, Guanjian, Shen, Qunshan, Wang, Chao, He, Xiaojin, Cao, Yunxia“…Whole exome sequencing and Sanger sequencing were performed to identify potential genetic variants in 51 patients with NOA. …”
Publicado 2021
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8972por Liu, Shuxiu, Xu, Hao, Guo, Xiaobing, Li, Shuang, Wang, Qian, Li, Yuan, Liu, Ruishan, Gou, Jianjun“…METHODS: Species identification was performed by MALDI-TOF MS, and bla(VIM-2) was identified by PCR and Sanger sequencing. Whole-genome sequencing analysis was conducted using the Illumina NovaSeq 6000 and Oxford Nanopore platforms. …”
Publicado 2021
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8973por Liyai, Rehema, Kimita, Gathii, Masakhwe, Clement, Abuom, David, Mutai, Beth, Onyango, David Miruka, Waitumbi, John“…Animal species within the rodents and shrews were identified by amplification of mitochondrial cytochrome b (cytb) gene followed by Sanger sequencing. CLC workbench was used to assemble the cytb gene sequences, after which their phylogenetic placements were determined by querying them against the GenBank nucleotide database. …”
Publicado 2021
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8974por Lin, Feng, Lin, Wanhui, Zhu, Chaofeng, Lin, Jilan, Zhu, Junge, Li, Xu-Ying, Wang, Zhanjun, Wang, Chaodong, Huang, Huapin“…METHODS: Here, we used PCR-Sanger to sequence the exons of these three genes in a cohort of 371 sALS patients and 711 healthy controls (Phase I) and validated the risk variant in another 300 sALS patients and 1076 controls (Phase II). …”
Publicado 2021
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8975por Chen, Huan-Yun, Hsu, Chia-Lang, Lin, Han-Yi, Lin, Yung-Feng, Tsai, Shih-Feng, Ho, Yu-Jung, Li, Ye-Ru, Tsai, Jin-Wu, Teng, Shu-Chun, Lin, Chin-Hsien“…METHODS: We performed whole genome sequencing in a genetically undiagnosed family with an autosomal dominant ataxia syndrome. Further Sanger sequencing of all exons and intron–exon boundary junctions of STUB1 in 249 unrelated patients with cerebellar ataxia was performed. …”
Publicado 2021
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8976por Wu, Shang-Gin, Liao, Wei-Yu, Su, Kang-Yi, Yu, Sung-Liang, Huang, Yen-Lin, Yu, Chong-Jen, Chih-Hsin Yang, James, Shih, Jin-Yuan“…METHODS: From 2005 to 2018, we collected nonsquamous NSCLC tissue samples for Kras mutation analysis using direct Sanger sequencing or MassARRAY genotyping (Agena Bioscience, San Diego, CA) at the National Taiwan University Hospital. …”
Publicado 2020
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8977por Yang, Feng, Hu, Anpei, Guo, Yanhua, Wang, Jianqun, Li, Dan, Wang, Xiaojing, Jin, Shikai, Yuan, Boling, Cai, Shuang, Zhou, Yi, Li, Qilan, Chen, Guo, Gao, Haiyang, Zheng, Liduan, Tong, Qiangsong“…METHODS: Circular RNAs (circRNAs) were validated by Sanger sequencing. Co-immunoprecipitation, mass spectrometry, chromatin immunoprecipitation (ChIP) sequencing, and RNA sequencing assays were applied to explore protein interaction and target genes. …”
Publicado 2021
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8978por Aweidah, Hamzah, Salameh, Manar, Yahalom, Claudia, Blumenfeld, Anat, Macarov, Michal, Weisschuh, Nicole, Kohl, Susanne, Banin, Eyal, Sharon, Dror“…Genetic analysis of CNGB3 exons, as well as part of intron 14, was performed by Sanger sequencing of PCR products. RESULTS: Screening for the CNGB3 c.1663–1205G>A variant revealed 17 patients belonging to 12 unrelated families who were either homozygous for this variant (7 cases, 5 families) or heterozygous in combination with another heterozygous known CNGB3 mutation (10 cases, 7 families). …”
Publicado 2021
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8979por Srivathsan, Amrita, Lee, Leshon, Katoh, Kazutaka, Hartop, Emily, Kutty, Sujatha Narayanan, Wong, Johnathan, Yeo, Darren, Meier, Rudolf“…We document that MinION barcodes are virtually identical to Sanger and Illumina barcodes for the same specimens (> 99.99%) and provide evidence that MinION flow cells and reads have improved rapidly since 2018. …”
Publicado 2021
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8980por Zhang, Jingjia, Li, Gang, Zhang, Ge, Kang, Wei, Duan, Simeng, Wang, Tong, Li, Jin, Huangfu, Zhiru, Yang, Qiwen, Xu, Yingchun, Jia, Wei, Sun, Hongli“…Polymerase chain reaction and Sanger sequencing were performed to determine the carbapenem resistance genes of all 302 isolates. …”
Publicado 2021
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