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9161por Lee, Sohyun, Park, Nanjoo, Yun, Sujung, Hur, Eunseon, Song, Jiwon, Lee, Hanna, Kim, Yongsug, Ryu, Sangryeol“…Plasmid-mediated quinolone resistance (PMQR) genes were detected by PCR amplification and quinolone resistance-determining regions (QRDRs) of the gyrA and parC genes were analyzed following Sanger sequencing of the PCR products. Thirty-four Salmonella strains with reduced susceptibility to fluoroquinolones (ciprofloxacin MIC ≥ 0.125 µg/mL and levofloxacin MIC ≥ 0.25 µg/mL) were selected from 208 human clinical Salmonella isolates. …”
Publicado 2021
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9162por Zoppo, Marina, Okoniewski, Nicole, Pantelyushin, Stanislav, vom Berg, Johannes, Schirmer, Kristin“…A T7 endonuclease I (T7EI) assay was performed on flow cytometry enriched transfected cells in order to detect CRISPR-mediated targeted mutations in the cyp1a1 locus, revealing an overall gene editing efficiency of 39%. Sanger sequencing coupled with bioinformatic analysis led to the detection of multiple insertions and deletions of variable lengths in the cyp1a1 region directed by CRISPR/Cas9 machinery. …”
Publicado 2021
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9163por Deng, Yan, Hu, Shenqiang, Luo, Chenglong, Ouyang, Qingyuan, Li, Li, Ma, Jiaming, Lin, Zhenping, Chen, Junpeng, Liu, Hehe, Hu, Jiwei, Chen, Guohong, Shu, Dingming, Pan, Yuxuan, Hu, Bo, He, Hua, Qu, Hao, Wang, Jiwen“…Because a non-synonymous mutation (c.642,923 G > A, P265L) changed DIO2 protein secondary structure in knob geese, and Sanger sequencing further showed that the AA genotype was identified in the population of knob geese, and was prevalent in a crossing population which was artificially selected for 10 generations. …”
Publicado 2021
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9164por Amaratunga, Shenali Anne, Tayeb, Tara Hussein, Dusatkova, Petra, Elblova, Lenka, Pruhova, Stepanka, Lebl, Jan“…Selected potentially pathogenic variants were confirmed using Sanger sequencing methods and evaluated by the American College of Medical Genetics (ACMG) standards and guidelines. …”
Publicado 2021
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9165por Smith, Chris, Maharaj, Avinaash Vickram, Qamar, Younus, Read, Jordan, Williams, Jack, Chan, Li, Marimuthu, Vidhya, Metherell, Louise“…Variants were confirmed using Sanger sequencing and predicted splice-site mutations were investigated using an in vitro splicing assay. …”
Publicado 2021
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9166por Mahendra, Jaideep, Rao, Abirami Nayaki, Mahendra, Little, Fageeh, Hytham N., Fageeh, Hammam Ibrahim, Balaji, Thodur Madapusi, Varadarajan, Saranya, Jagannathan, Raghunathan, Mehta, Deepak, Suresh, Venkata V., Raj, A. Thirumal, Patil, Shankargouda“…Subgingival plaque and blood samples were obtained from both groups and were subjected to further molecular analysis for NLRP3 (rs4612666) and CARD8 (rs2043211) expression and allele change using conventional polymerase chain reaction (PCR) and gene sequencing (Sanger’s method). Results: Amongst the demographic variables, age, and monthly income were statistically significant between the two groups. …”
Publicado 2021
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9167por Henn, Dominic, Zhao, Dehua, Bonham, Clark A., Chen, Kellen, Greco, Autumn H., Padmanabhan, Jagannath, Trotsyuk, Artem A., Barrera, Janos A., Januszyk, Michael, Stanley Qi, Lei, Gurtner, Geoffrey C.“…A CRISPR/Cas9 editing pipeline was developed for KO of Ndrg2 in DCs with a transfection rate and editing efficiency of > 90% shown by Sanger Sequencing. Excisional wounds treated with Ndrg2-KO DCs demonstrated significantly accelerated healing compared to control DCs and blank hydrogels. scRNA seq revealed that Ndrg2 downregulation strongly induced Vegfa expression and anti-oxidant transcriptomic signatures. …”
Publicado 2021
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9168“…We suspected that she was suffering from GS by initial estimation. Direct Sanger sequencing was used to analyze the causative gene SLC12A3 of GS. …”
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9169por Soto, Javier Andrés, Rodríguez-Antolín, Carlos, Vera, Olga, Pernía, Olga, Esteban-Rodríguez, Isabel, Dolores Diestro, Maria, Benitez, Javier, Sánchez-Cabo, Fátima, Alvarez, Rafael, De Castro, Javier, Ibanez de Cáceres, Inmaculada“…We validated the methylation state and expression levels of candidate genes in each cellular phenotype through Sanger sequencing and reverse transcription polymerase chain reaction, respectively. …”
Publicado 2021
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9170por Lan, Yun, Li, Linghua, He, Xiang, Hu, Fengyu, Deng, Xizi, Cai, Weiping, Li, Junbin, Ling, Xuemei, Fan, Qinghong, Cai, Xiaoli, Li, Liya, Li, Feng, Tang, Xiaoping“…The HIV-1 pol region was amplified by reverse transcriptional PCR and sequenced by sanger sequencing. Genotypes, surveillance drug resistance mutations (SDRMs) and TDR were analyzed. …”
Publicado 2021
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9171por Zhang, Yan-ping, Lin, Bin, Ji, Yuan-yuan, Hu, Ya-nan, Lin, Xin-fu, Tang, Yi, Zhang, Jian-hui, Wu, Shao-jie, Cai, Sen-lin, Zhou, Yan-feng, Chen, Ting, Fang, Zhu-ting, Luo, Jie-wei“…The proband and her parents were screened for the responsible mutation using second-generation whole exon sequencing, and the members of the family were verified for suspected mutations using Sanger sequencing. Mutant and wild type plasmids were constructed and transfected into HEK293T cells to detect the mRNA and protein expression of PROS1. …”
Publicado 2021
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9172TNFAIP3 mutation may be associated with favorable overall survival for patients with T-cell lymphomapor Chen, Cunte, Chen, Zheng, Huang, Ling, Zhou, Lingling, Zhu, Lihua, Liu, Sichu, Luo, Gengxin, Li, Wenyu, Zeng, Chengwu, Li, Yangqiu“…Additionally, non-CDS mutations in TNFAIP3 in 41 TCL patients from our center (JNU) were investigated by polymerase chain reaction (PCR) and Sanger sequencing. Furthermore, non-CDS mutations in TNFAIP3 in 47 TCL patients from Gene Expression Omnibus (GEO) dataset were explored. …”
Publicado 2021
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9173por Cai, Hongchao, Feng, Yaning, Fan, Peiwen, Guo, Yuping, Kuerban, Gulina, Chang, Cheng, Yao, Xuan, Peng, Yanchun, Wang, Ruozheng“…HLA‐A alleles were typed using Sanger sequencing‐based typing techniques with DNA extracted from the peripheral blood. …”
Publicado 2021
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9174por Garam, Nóra, Cserhalmi, Marcell, Prohászka, Zoltán, Szilágyi, Ágnes, Veszeli, Nóra, Szabó, Edina, Uzonyi, Barbara, Iliás, Attila, Aigner, Christof, Schmidt, Alice, Gaggl, Martina, Sunder-Plassmann, Gere, Bajcsi, Dóra, Brunner, Jürgen, Dumfarth, Alexandra, Cejka, Daniel, Flaschberger, Stefan, Flögelova, Hana, Haris, Ágnes, Hartmann, Ágnes, Heilos, Andreas, Mueller, Thomas, Rusai, Krisztina, Arbeiter, Klaus, Hofer, Johannes, Jakab, Dániel, Sinkó, Mária, Szigeti, Erika, Bereczki, Csaba, Janko, Viktor, Kelen, Kata, Reusz, György S., Szabó, Attila J., Klenk, Nóra, Kóbor, Krisztina, Kojc, Nika, Knechtelsdorfer, Maarten, Laganovic, Mario, Lungu, Adrian Catalin, Meglic, Anamarija, Rus, Rina, Kersnik Levart, Tanja, Macioniene, Ernesta, Miglinas, Marius, Pawłowska, Anna, Stompór, Tomasz, Podracka, Ludmila, Rudnicki, Michael, Mayer, Gert, Rysava, Romana, Reiterova, Jana, Saraga, Marijan, Seeman, Tomáš, Zieg, Jakub, Sládková, Eva, Stajic, Natasa, Szabó, Tamás, Capitanescu, Andrei, Stancu, Simona, Tisljar, Miroslav, Galesic, Kresimir, Tislér, András, Vainumäe, Inga, Windpessl, Martin, Zaoral, Tomas, Zlatanova, Galia, Józsi, Mihály, Csuka, Dorottya“…FHR-5 serum levels were measured in ELISA, the CFHR5 gene was analyzed by Sanger sequencing, and selected variants were studied as recombinant proteins in ELISA and surface plasmon resonance (SPR). …”
Publicado 2021
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9175por Gao, Yang, Suding, Zeyang, Wang, Lele, Liu, Dandan, Su, Shijie, Xu, Jinjun, Hu, Junjie, Tao, Jianping“…To validate fusion transcripts, reverse transcription-PCR was performed on 16 candidates, with an accuracy reaching up to 87.5%. Sanger sequencing of the PCR products further confirmed the authenticity of chimeric transcripts. …”
Publicado 2021
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9176por Zhang, Weiwei, Zheng, Ming, Kong, Shan, Li, Xian, Meng, Shuting, Wang, Xudong, Wang, Feng, Tang, Chenxue, Ju, Shaoqing“…Exonuclease digestion assay, actinomycin D, agarose gel electrophoresis (AGE), and Sanger sequencing verified the potential of hsa_circ_0007507 as a biomarker. …”
Publicado 2021
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9177por Shin, Chang Ho, Lim, Chaemoon, Kim, Hwa Young, Yoo, Won Joon, Cho, Tae-Joon, Choi, In Ho, Ko, Jung Min“…Samples from patients showing no abnormalities in MS-MLPA or bisulfite pyrosequencing were analyzed by single nucleotide polymorphism (SNP) microarray and CDKN1C Sanger sequencing. We introduced a metric named as the methylation difference, defined as the difference in DNA methylation levels between DMR1 and DMR2. …”
Publicado 2021
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9178por Ikegbunam, Moses, Ojo, Johnson A., Kokou, Kossiwa, Morikwe, Ugonna, Nworu, Chukwuemeka, Uba, Chibuzo, Esimone, Charles, Velavan, Thirumalaisamy P., Ojurongbe, Olusola“…Samples that were positive for P. falciparum were genotyped for the pfk13 gene using the Sanger sequencing method. The single nucleotide polymorphisms were analysed using the Bioedit software. …”
Publicado 2021
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9179por McGuire Sams, Cierla, Shepp, Kasey, Pugh, Jada, Bishop, Madison R., Merner, Nancy D.“…METHODS: Two different cohorts of breast cancer cases were investigated, the Alabama Hereditary Cancer Cohort and The Cancer Genome Atlas, which were analyzed through nested PCRs/Sanger sequencing and whole-exome sequencing, respectively. …”
Publicado 2021
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9180por Hendrickson, Ryan, Urbaniak, Camilla, Minich, Jeremiah J., Aronson, Heidi S., Martino, Cameron, Stepanauskas, Ramunas, Knight, Rob, Venkateswaran, Kasthuri“…The 130 NSA isolates were represented by 16 bacterial genera, of which 97% were identified as spore-formers via Sanger sequencing. The most spatially abundant isolate was Bacillus subtilis, and the most temporally abundant spore-former was Virgibacillus panthothenticus. …”
Publicado 2021
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