“…On evaluation via tenfold cross-validation and two independent testing data sets, PseUdeep outperforms the best traditional machine learning model available. PseUdeep source code and data sets are available at https://github.com/dan111262/PseUdeep.…”
Enlace del recurso
Enlace del recurso
Enlace del recurso

“…Compared with other tools such as mlst, CGE/MLST, MLSTar, and PubMLST, FastMLST takes advantage of multiple processors to simultaneously type up to 28 000 genomes in less than 10 minutes, reducing processing times by at least 3-fold with 100% concordance to PubMLST, if contaminated genomes are excluded from the analysis. The source code, installation instructions, and documentation of FastMLST are available at https://github.com/EnzoAndree/FastMLST…”
Enlace del recurso
Enlace del recurso
Enlace del recurso

“…Finally, as part of the third main component, the confounding issue stemming from the use of nonspecific interaction networks generated as combinations of interactions from different tissues is resolved through the creation and use of tissue-specific networks in the proposed framework. The data, the source code and useful scripts are available at: https://github.com/abu-compbio/NetCentric.…”
Enlace del recurso
Enlace del recurso
Enlace del recurso

“…To automatically run the iterative optimization tasks, a source code is constructed directly in the Geotechnical Engineering Software (PLAXIS) by using Python to ensure that the operation between optimization algorithm and F.E. simulations are smooth to guarantee the accuracy of the complex calculation for the soil problem. …”
Enlace del recurso
Enlace del recurso
Enlace del recurso

“…AVAILABILITY AND IMPLEMENTATION: The source code of CCIP can be accessed at: https://github.com/GaoLabXDU/CCIP. …”
Enlace del recurso
Enlace del recurso
Enlace del recurso

“…We also achieve a 0.4240 mean average precision on the lesion segmentation task. All source code, models and results are publicly available on https://github.com/AlexTS1980/COVID-Affinity-Model.…”
Enlace del recurso
Enlace del recurso
Enlace del recurso

“…In this paper, we present a localised method for incorporating the effects of elastic walls into blood flow simulations using the lattice Boltzmann method implemented by the open-source code HemeLB. We demonstrate that our approach is able to more accurately capture the flow behaviour expected in elastic walled vessels than ones with rigid walls. …”
Enlace del recurso
Enlace del recurso
Enlace del recurso

“…AVAILABILITY AND IMPLEMENTATION: Source code in data preparation and model training are provided at GitHub website (https://github.com/YunxiaoRen/ML-iAMR). …”
Enlace del recurso
Enlace del recurso
Enlace del recurso

“…We achieve the highest classification accuracy of 98.80% on the said database, which outperforms many state-of-the-art methods, thereby confirming the superiority of the proposed model. Source code of this work is available here: https://github.com/subro608/thermogram_breast_cancer-…”
Enlace del recurso
Enlace del recurso
Enlace del recurso

“…As a result, medical experts confirmed the superiority of the proposed AM-UNet model for automatic CL segmentation. The source code and model of the AM-UNet project is publicly available on GitHub: https://github.com/AhmedAlbishri/AM-UNET.…”
Enlace del recurso
Enlace del recurso
Enlace del recurso

“…Our approach is tested on two publicly available contactless palmprint datasets—namely, IITD and CASIA—and is demonstrated to perform favorably against state-of-the-art methods from the literature. The source code for the proposed model is made publicly available.…”
Enlace del recurso
Enlace del recurso
Enlace del recurso

“…AVAILABILITY AND IMPLEMENTATION: R source code of Importance-Penalized Joint Graphical Lasso is freely available at https://github.com/Wu-Lab/IPJGL. …”
Enlace del recurso
Enlace del recurso
Enlace del recurso

“…AVAILABILITY AND IMPLEMENTATION: The source code of PopIns2 is available from https://github.com/kehrlab/PopIns2. …”
Enlace del recurso
Enlace del recurso
Enlace del recurso

“…In the end, we make the online tool publicly available at https://baohongz.github.io/bioInfograph while releasing the source code at https://github.com/baohongz/bioInfograph under MIT open-source license.…”
Enlace del recurso
Enlace del recurso
Enlace del recurso

“…We have publicly released our source code, embeddings, and models to spur further application to spatial transcriptomics. …”
Enlace del recurso
Enlace del recurso
Enlace del recurso

“…AVAILABILITY AND IMPLEMENTATION: The data underlying this article are available in the online supplementary material. The source code of CycPeptPPB is available at https://github.com/akiyamalab/cycpeptppb. …”
Enlace del recurso
Enlace del recurso
Enlace del recurso

“…CONCLUSION: DENTIST provides an accurate approach to improve the contiguity and completeness of fragmented assemblies with long reads. DENTIST's source code including a Snakemake workflow, conda package, and Docker container is available at https://github.com/a-ludi/dentist. …”
Enlace del recurso
Enlace del recurso
Enlace del recurso

“…CONCLUSIONS: Qiber3D is implemented as a Python package, and its source code is freely available at https://github.com/theia-dev/Qiber3D. …”
Enlace del recurso
Enlace del recurso
Enlace del recurso

“…Using this framework to analyze a real-world neonatal mouse heart cell dataset, the detected biomarkers may characterize novel subtypes of cardiac muscle cells. The source code and data for Polar Gini Curve could be found at http://discovery.informatics.uab.edu/PGC/ or https://figshare.com/projects/Polar_Gini_Curve/76749.…”
Enlace del recurso
Enlace del recurso
Enlace del recurso

“…The server is publicly available at http://RNALigands.ccbr.utoronto.ca. The source code can also be downloaded at https://github.com/SaisaiSun/RNALigands.…”
Enlace del recurso
Enlace del recurso
Enlace del recurso