“…The online server is freely accessible at https://lab.malab.cn/~acy/iPVP-DRLF. In addition, the source code and datasets are also accessible at https://github.com/jiaoshihu/iPVP-DRLF.…”
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“…The study aim is to identify parasite proteins that induce a protective response in an animal model as reported in the scientific literature within the last 30 years using machine learning and natural language processing. Source code to fulfil this aim and the vaccine candidate list obtained is made available.…”
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“…We observe that the TADs called from single-cell Hi-C data are not shared across individual cells and that the TAD boundaries called from raw or imputed single-cell Hi-C are significantly different from those called from bulk Hi-C, confirming the cell-to-cell variability in terms of TAD definitions. The source code for scHiCEmbed is publicly available, and the URL can be found in the conclusion section.…”
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“…This easy-to-use implementation is aimed to microbial ecologists with little to no experience in programming, while the most experienced bioinformatics will also be able to manipulate the source code’s functions with ease.…”
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“…AVAILABILITY AND IMPLEMENTATION: Source code is available on Github at https://github.com/CMUSchwartzLab/RADs.…”
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“…AVAILABILITY AND IMPLEMENTATION: Data and source code for reproducing the experiments are available at: https://github.com/Kingsford-Group/gtedemedtest/. …”
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“…AVAILABILITY AND IMPLEMENTATION: The source code of ContigNet and related datasets can be downloaded from https://github.com/tianqitang1/ContigNet.…”
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“…AVAILABILITY AND IMPLEMENTATION: Source code is available at github.com/ZhiGroup/P-smoother.…”
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“…AutoClassWeb is implemented in Python and is published under the 3-Clauses BSD license. The source code is available at https://github.com/pierrepo/autoclassweb along with a detailed documentation.…”
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“…Developed using the generally agreed upon standard methodology for estimation of reference ET(0), this database and notably, the accompanying source code, provide a robust tool for a variety of scientific applications in an era of rapidly changing climatic conditions.…”
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“…Specifically, our results show superior real-time performance in retrieving good quality echo from individual cardiac view, segmenting cardiac chambers with complex overlaps, and extracting cardiac indices that highly agree with the experts’ values. The source code of our implementation can be found in the project ‘ s GitHub page.…”
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“…AVAILABILITY AND IMPLEMENTATION: The DST source code and Docker images are respectively available at https://github.com/SCAI-BIO/data-steward and https://hub.docker.com/r/phwegner/data-steward. …”
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“…We provide benchmarks for the use cases, as well downloadable, trained baseline systems with open-source code for reproducibility. One further use case is to verify the metadata and transcripts given in this corpus itself, and to suggest artificial metadata and transcripts for the part of the corpus where it is missing.…”
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“…The experimental results show that the proposed method can achieve better performance than conventional schemes and most neural networks. Our source code is made available at https://github.com/LHE-IT/Low-dose-CT-Image-Denoising/tree/main/Local Filtered Mechanism.…”
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“…The obtained results prove the usefulness of BSNDO as a FS method. The source code of this work is publicly available at https://github.com/ahmed-shameem/Feature_selection.…”
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“…Precompiled releases (Linux, MacOS, Windows) and commented source code for gfastats are available under MIT licence at https://github.com/vgl-hub/gfastats. …”
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“…This work presents the results, lessons-learned and the source code of deploying a heterogeneous mobile robot fleet at the Tartu University Hospital, performing object transportation tasks in areas of intense crowd movement and narrow hallways. …”
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“…MMKP is available as open-source code on GitHub: https://github.com/ZjuLiangsl/mmkp.…”
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“…In these studies, segmentation and quantification of myocardial infarct lesion are often performed with a commercial software or an in-house closed-source code development thus creating a barrier for reproducible research. …”
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“…AVAILABILITY AND IMPLEMENTATION: A fully featured web application is freely available from LanceOtron.molbiol.ox.ac.uk, command line interface via python is pip installable from PyPI at https://pypi.org/project/lanceotron/, and source code and benchmarking tests are available at https://github.com/LHentges/LanceOtron. …”
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