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2821AFTGAN: prediction of multi-type PPI based on attention free transformer and graph attention networkpor Kang, Yanlei, Elofsson, Arne, Jiang, Yunliang, Huang, Weihong, Yu, Minzhe, Li, Zhong“…AVAILABILITY AND IMPLEMENTATION: The source code is publicly available at https://github.com/1075793472/AFTGAN. …”
Publicado 2023
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2822por Jin, Zhi, Wu, Tingfang, Chen, Taoning, Pan, Deng, Wang, Xuejiao, Xie, Jingxin, Quan, Lijun, Lyu, Qiang“…AVAILABILITY AND IMPLEMENTATION: The source code of the method along with trained models is freely available at https://github.com/lennylv/CAPLA. …”
Publicado 2023
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2823por Balcı, Ali Tuğrul, Ebeid, Mark Maher, Benos, Panayiotis V, Kostka, Dennis, Chikina, Maria“…AVAILABILITY AND IMPLEMENTATION : The source code, including scripts for the analysis of key findings, can be found at https://github.com/boooooogey/ATAConv, implemented in Python. …”
Publicado 2023
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2824por Zhiyanov, Anton, Engibaryan, Narek, Nersisyan, Stepan, Shkurnikov, Maxim, Tonevitsky, Alexander“…AVAILABILITY AND IMPLEMENTATION: Source code and documentation of DCoNA are available at https://github.com/zhiyanov/DCoNA. …”
Publicado 2023
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2825“…Both models can train on and predict spectral data at arbitrary resolution. Source code and predicted EI–MS spectra for 73.2M small molecules from PubChem will be made freely accessible online.…”
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2826por Felline, Angelo, Conti, Simone, Seeber, Michele, Cecchini, Marco, Fanelli, Francesca“…This update places Wordom among the most suitable, complete, user-friendly, and efficient software for the analysis of biomolecular simulations. The source code of Wordom and the relative documentation are available under the GNU general public license at http://wordom.sf.net.…”
Publicado 2023
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2827“…Results show our method achieved 70.2% Dice coefficient, substantially outperforming the CAM-based baseline at 48.6%. We published our source code at https://github.com/DIAGNijmegen/bodyct-dram.…”
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2828“…Additionally, we show that GCDM’s geometric features can effectively be repurposed to directly optimize the geometry and chemical composition of existing 3D molecules for specific molecular properties, demonstrating new, real-world versatility of molecular diffusion models. Our source code, data, and reproducibility instructions are freely available at https://github.com/BioinfoMachineLearning/bio-diffusion.…”
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2829“…We present TorchDIVA, a full rebuild of DIVA in Python using PyTorch tensors. DIVA source code was directly translated from Matlab to Python, and built-in Simulink signal blocks were implemented from scratch. …”
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2830por Yu, Xinyi, Xiao, Jiashun, Cai, Mingxuan, Jiao, Yuling, Wan, Xiang, Liu, Jin, Yang, Can“…AVAILABILITY AND IMPLEMENTATION: The source code is available at https://github.com/YangLabHKUST/PALM. …”
Publicado 2023
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2831“…The SPADAN toolbox source code is also available on GitHub (https://github.com/PooyaBorzou/SPADAN). …”
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2832por Ai, Dongmei, Wang, Mingmei, Zhang, Qingchuan, Cheng, Longwei, Wang, Yishu, Liu, Xiuqin, Xia, Li C.“…These prognosis-related immune genes may be potential biomarkers for colorectal cancer diagnosis and treatment. Our open-source code is freely available from GitHub at https://github.com/gutmicrobes/Prognosis-model.git.…”
Publicado 2023
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2833por Ahn, Sunil, Kim, Namgyu, Lee, Seehoon, Hwang, Soonwook, Breton, Vincent, Koblitz, Birger“…Secondly, to deal with the performance degrading problem associated with the locking of the whole table, we modified the AMGA source code and added a new API that allows the two separate AMGA APIs, SELECT and UPDATE needed to take a task, to be invoked at once. …”
Publicado 2008
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2834por Marian, Ludmila, Gabancho, Esteban, Gonzalez Lopez, Jose Benito, Tarocco, Nicola, Costa, Flavio, Witowski, Sebastian“…All this could be of high interest to other institutes wanting to reuse the CDS Videos open source code for creating their own video platform. Last but not least, the talk will detail how the user community at CERN and beyond can take advantage of the CDS Videos platform for creating and disseminating video content.…”
Publicado 2018
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2835por Senoo, Elisha Elikem Kofi, Akansah, Ebenezer, Mendonça, Israel, Aritsugi, Masayoshi“…We demonstrated the utilization of MCF in a real-world use-case in smart agriculture, using off-the-shelf sensors and actuators and an open-source code. As a user guide, we discuss the necessary considerations for each subsystem and evaluate our framework in terms of its scalability, reusability, and interoperability (issues that are often overlooked during development). …”
Publicado 2023
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2836“…The LSM provides a much needed framework with which to understand ctDNA shedding and to accelerate discovery of ctDNA biomarkers. The LSM source code has been available in the IBM BioMedSciAI Github (https://github.com/BiomedSciAI/Geno4SD).…”
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2837“…It is also flexible to be applied to challenging single-cell ATAC-seq data without loss of superiority. The source code of scEMAIL can be accessed at https://github.com/aster-ww/scEMAIL and https://ngdc.cncb.ac.cn/biocode/tools/BT007335/releases/v1.0.…”
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2838“…In-depth literature survey is conducted to find that many drug combinations predicted by MGAE-DC are supported by previous experimental studies. The source code and data are available at https://github.com/yushenshashen/MGAE-DC.…”
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2839“…The results demonstrate that combining the multi-model method (PSS) with the complementary single-model method (ICPS) is a promising approach to EMA. The source code of MULTICOM_qa is available at https://github.com/BioinfoMachineLearning/MULTICOM_qa.…”
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2840“…AVAILABILITY AND IMPLEMENTATION: The source code of CFAGO and experiments data are available at: http://bliulab.net/CFAGO/.…”
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