“…The proposed testing strategy is applied to a genomic region on chromosome 15q13.3 that was implicated in NSCL/P etiology in a previous genome-wide association study, and its results are compared with standard approaches. Availability: Source code and documentation for the implementation in R will be provided online. …”
Enlace del recurso
Enlace del recurso
Enlace del recurso

“…The proposed method can be used as a standard procedure for any peak picking method and straightforwardly applied to some other prediction selection problems in bioinformatics. The source code, documentation and example data of the proposed method is available at http://sfb.kaust.edu.sa/pages/software.aspx.…”
Enlace del recurso
Enlace del recurso
Enlace del recurso

“…The TNRS is accessible via a web interface at http://tnrs.iplantcollaborative.org/ and as a RESTful web service and application programming interface. Source code is available at https://github.com/iPlantCollaborativeOpenSource/TNRS/.…”
Enlace del recurso
Enlace del recurso
Enlace del recurso

“…We show that our approach is, on average, 10 × faster than commonly used optical flow implementations in the Insight Tool-Kit (ITK) and reduces the average flow end point error by 50% in regions with complex dynamic processes, such as cell divisions. Availability: Source code freely available in the Software section at http://janelia.org/lab/keller-lab. …”
Enlace del recurso
Enlace del recurso
Enlace del recurso

“…Availability and implementation: All SBSI binaries and source-code are freely available from http://sourceforge.net/projects/sbsi under an Apache 2 open-source license. …”
Enlace del recurso
Enlace del recurso
Enlace del recurso

“…In our evaluation, MixSIH has successfully extracted reliable haplotype segments. The C++ source code of MixSIH is available at https://sites.google.com/site/hmatsu1226/software/mixsih.…”
Enlace del recurso
Enlace del recurso
Enlace del recurso

“…We highlight some scientific studies that have used or are using Chaste, and the insights they have provided. The source code, both for specific releases and the development version, is available to download under an open source Berkeley Software Distribution (BSD) licence at http://www.cs.ox.ac.uk/chaste, together with details of a mailing list and links to documentation and tutorials.…”
Enlace del recurso
Enlace del recurso
Enlace del recurso

Enlace del recurso
Enlace del recurso
Enlace del recurso

“…This algorithm obtains significant speedups over its predecessor: CUDASW++ 2.0, by benefiting from the use of CPU and GPU SIMD instructions as well as the concurrent execution on CPUs and GPUs. The source code and the simulated data are available at http://cudasw.sourceforge.net.…”
Enlace del recurso
Enlace del recurso
Enlace del recurso

“…These restraints could be derived from experimental data or could be design restraints in the case of computational protein design. C++ source code is available for download from http://www.sbg.bio.ic.ac.uk/phyre2/PD2/.…”
Enlace del recurso
Enlace del recurso
Enlace del recurso

“…This results in improved accuracy, relative to unstructured gene copy number data, at predicting tumor state and future metastasis. Availability: Source code for software that does FISH tree building (FISHtrees) and the data on cervical and breast cancer examined here are available at ftp://ftp.ncbi.nlm.nih.gov/pub/FISHtrees. …”
Enlace del recurso
Enlace del recurso
Enlace del recurso

“…Availability: Binaries and source code of FlowgramFixer are freely available at: http://www.cs.tau.ac.il/~davidgo5/flowgramfixer.html. …”
Enlace del recurso
Enlace del recurso
Enlace del recurso

“…Availability: The library is provided as a Ruby Gem from https://rubygems.org/gems/bio-svgenes under the MIT license, and open source code is available at https://github.com/danmaclean/bioruby-svgenes also under the MIT License. …”
Enlace del recurso
Enlace del recurso
Enlace del recurso

“…GenGIS release versions, tutorials and documentation are freely available at http://kiwi.cs.dal.ca/GenGIS, and source code is available at https://github.com/beiko-lab/gengis.…”
Enlace del recurso
Enlace del recurso
Enlace del recurso

“…The µBAR is based entirely around open source hardware and software, and in the accompanying online supplement we present a full set of schematics, bill of materials, PCB layouts, CAD drawings, and source code for the µBAR instrument with the goal of spurring further innovation toward low-cost genetic diagnostics.…”
Enlace del recurso
Enlace del recurso
Enlace del recurso

“…Our proposed method found that several new gene regulations involved in these itemsets were useful for biologists and provided further insights into the mechanisms underpinning biological processes. The Java source code and other related materials used in this study are available at “http://websystem.csie.ncku.edu.tw/TIIM_Program.rar”.…”
Enlace del recurso
Enlace del recurso
Enlace del recurso

“…The propensity scores of amino acids and dipeptides for estimating the protein crystallizability can aid biologists in designing mutation of surface residues to enhance protein crystallizability. The source code of SCMCRYS is available at http://iclab.life.nctu.edu.tw/SCMCRYS/.…”
Enlace del recurso
Enlace del recurso
Enlace del recurso

“…The model and method source code are made available at http://clip.med.yale.edu/SHM…”
Enlace del recurso
Enlace del recurso
Enlace del recurso

“…AVAILABILITY AND IMPLEMENTATION: MACRO-APE is implemented in ruby 1.9; software including source code and a manual is freely available at http://autosome.ru/macroape/ and in supplementary materials.…”
Enlace del recurso
Enlace del recurso
Enlace del recurso

“…For local execution, the ClassyFlu source code in PERL is freely available.…”
Enlace del recurso
Enlace del recurso
Enlace del recurso