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  1. 3201
  2. 3202
    por Xu, Gang, Wang, Qinghua, Ma, Jianpeng
    Publicado 2021
    “…OPUS-Fold2 is written in Python and TensorFlow2.4, which is user-friendly to any source-code-level modification. AVAILABILITYAND IMPLEMENTATION: The code and pre-trained models of OPUS-X can be downloaded from https://github.com/OPUS-MaLab/opus_x. …”
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  3. 3203
    por He, Di, Xie, Lei
    Publicado 2021
    “…AVAILABILITYAND IMPLEMENTATION: The source code is freely available at https://github.com/XieResearchGroup/CLEIT. …”
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  4. 3204
    “…To that end, there is no registration required to download the source code or runtime code for the ICE service and its default rule. …”
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  5. 3205
    “…The proposed method performs better results compared to the state-of-the-art learning to augment strategies in terms of sensitivity (0.808), specificity (0.915), and F-Measure (0.737). The source code of the proposed method is available at https://github.com/mohamadmomeny/Learning-to-augment-strategy.…”
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  6. 3206
    “…AVAILABILITY AND IMPLEMENTATION: VaLiAnT is a command line tool written in Python. Source code, testing data, example input and output files and executables are available (https://github.com/cancerit/VaLiAnT) in addition to a detailed user manual (https://github.com/cancerit/VaLiAnT/wiki). …”
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  7. 3207
    “…We suggest that the flexible design idea of CITEMO can be an inspiration for other single-cell multimodal tasks. The complete source code and dataset of the CITEMO framework can be obtained from https://github.com/studentiz/CITEMO.…”
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  8. 3208
    “…Our comprehensive evaluation using 25 publicly available scRNA-seq datasets and various simulation scenarios against five state-of-the-art methods demonstrates that scISR is better than other imputation methods in recovering scRNA-seq expression profiles via imputation. scISR consistently improves the quality of cluster analysis regardless of dropout rates, normalization techniques, and quantification schemes. The source code of scISR can be found on GitHub at https://github.com/duct317/scISR.…”
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  9. 3209
    “…AVAILABILITY: The exposomeShiny source code is freely available on Github at [https://github.com/isglobal-brge/exposomeShiny], Git tag v1.4. …”
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  10. 3210
    “…Code smells are poor implementation choices that developers apply while evolving source code and that affect program maintainability. …”
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  11. 3211
    “…CONCLUSIONS: Semantic type prediction is a key part of building accurate NLP pipelines for broad-coverage information extraction from biomedical text. We make our source code and novel datasets publicly available to foster reproducible research.…”
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  12. 3212
    “…AVAILABILITY AND IMPLEMENTATION: Source code and datasets are available at https://github.com/ibivu/pipenn/. …”
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  13. 3213
    “…Therefore, this framework has a great potential to be used in clinical and telehealth applications. The source code is available at https://github.com/sdnjly/WSDL-AD.…”
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  14. 3214
    por Feng, Xikang, Chen, Lingxi
    Publicado 2022
    “…CONCLUSIONS: SCSilicon is a user-friendly software package for users to develop and benchmark single-cell CNV callers. Source code of SCSilicon is available at https://github.com/xikanfeng2/SCSilicon. …”
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  15. 3215
    “…AVAILABILITY AND IMPLEMENTATION: HPiP is released as an open-source code under the MIT license that is freely available on GitHub (https://github.com/BabuLab-UofR/HPiP) as well as on Bioconductor (http://bioconductor.org/packages/devel/bioc/html/HPiP.html). …”
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  16. 3216
  17. 3217
    “…The simulation results demonstrate that the CO algorithm can successfully solve large-scale and challenging optimization problems and offers a significant advantage over different standards and improved and hybrid existing algorithms. Note that the source code of the CO algorithm is publicly available at https://www.optim-app.com/projects/co.…”
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  18. 3218
    “…Our model is flexible to configure and simple to modify for modeling different scenarios under different environmental conditions and mitigation measures. We release the source code of the COVIDHunter implementation at https://github.com/CMU-SAFARI/COVIDHunter and show how to flexibly configure our model for any scenario and easily extend it for different measures and conditions than we account for.…”
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  19. 3219
    “…Additionally, a GitHub link (https://github.com/sanjaysinghrathi/DILI-Classifier) for app source code and ISMB extended video talk (https://www.youtube.com/watch?…”
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  20. 3220
    “…CONCLUSION: The proposed methods simplify inter‐scan motion correction of [Formula: see text] maps and are applicable at both 3T and 7T, where a body coil is typically not available. The open‐source code for all methods is made publicly available.…”
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