“…AVAILABILITY AND IMPLEMENTATION: HiCube is implemented in Javascript and can be installed via NPM. The source code is freely available at GitHub (https://github.com/wmalab/HiCube).…”
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“…This article is accompanied by both the compiled reports and the source code and explanation necessary to use them.…”
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“…AVAILABILITY AND IMPLEMENTATION: BondGraphs.jl is freely available under the MIT license. Source code and documentation can be found at https://github.com/jedforrest/BondGraphs.jl.…”
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“…AVAILABILITY AND IMPLEMENTATION: CAAStools source code is available at http://github.com/linudz/caastools, along with documentation and examples.…”
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“…AVAILABILITY AND IMPLEMENTATION: Source code is freely available at https://github.com/discretedynamics/cyclone under the Apache-2.0 license.…”
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“…All tools and their source code are freely available at . CONCLUSION: These tools have been shown to effectively identify regulatory regions in echinoderms, mammals, and nematodes.…”
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“…Availability: Distribution and source code are available at (https://sourceforge.net/projects/diyg/). …”
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“…Availability and Implementation: Arcadia is written in C++. The source code is available (along with Mac OS and Windows binaries) under the GPL from http://arcadiapathways.sourceforge.net/ Contact: alice.villeger@manchester.ac.uk Supplementary information: Supplementary data are available at Bioinformatics online.…”
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“…Availability and implementation: METAL, including source code, documentation, examples, and executables, is available at http://www.sph.umich.edu/csg/abecasis/metal/ Contact: goncalo@umich.edu…”
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“…Availability and Implementation: This open-source application was implemented in Perl and can be used as a stand alone version or accessed online through a user-friendly web interface. The source code, user help and additional information are available at http://prinseq.sourceforge.net/. …”
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“…Due to its relatively simple architecture, it is easy to add specialised visualization functionalities, facilitating further customised data analysis. The software's source code is freely available; it is open for project and task-specific modifications. …”
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“…Notably, it also seeks to support a variety of user needs by being exhaustive in the options available to the user. The source code is publicly available and easily extensible.…”
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“…Availability and implementation: forqs is implemented as a command-line C++ program. Source code and binary executables for Linux, OSX and Windows are freely available under a permissive BSD license: https://bitbucket.org/dkessner/forqs. …”
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“…Instructions on how to use the tool are available at http://goo.gl/dVeWpg and the source code can be found at http://github.com/biojs/biojs and DOI: 10.5281/zenodo.7708.…”
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“…Availability and implementation: The Python source code is freely available for download from the PyCorrFit web page at http://pycorrfit.craban.de. …”
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“…Availability and implementation: http://genome.sph.umich.edu/wiki/RAREMETAL for executables, source code, documentation and tutorial. Contact: sfengsph@umich.edu or goncalo@umich.edu…”
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“…Availability and implementation: Source code is available at http://sourceforge.net/projects/staden/files/io_lib/ under the BSD software licence. …”
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“…The tools can be accessed at http://hvdr.bioinf.wits.ac.za/SmallGenomeTools, and the source code is available online at https://github.com/DrTrevorBell/SmallGenomeTools.…”
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