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  1. 3841
    “…AVAILABILITY AND IMPLEMENTATION: SGI is an open-source package implemented in R. Package source codes and hands-on tutorials are available at https://github.com/krumsieklab/sgi. …”
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    Online Artículo Texto
    SGI: automatic clinical subgroup identification in omics datasets
  2. 3842
    “…The visualizer, documentation, all source codes and examples are available at https://thekaplanlab.github.io/ and GitHub repository https://github.com/thekaplanlab/msabrowser. …”
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    Online Artículo Texto
    MSABrowser: dynamic and fast visualization of sequence alignments, variations and annotations
  3. 3843
    por Charbonneau, Paul
    Publicado 2017
    “…Natural Complexity provides the necessary topical background, complete source codes in Python, and detailed explanations for all computational models. …”
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    Natural complexity: a modeling handbook
  4. 3844
    “…All hardware Computer-Aided Design (CAD) files and software source codes have been released and can be easily assembled and modified. …”
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    Online Artículo Texto
    BioIn-Tacto: A compliant multi-modal tactile sensing module for robotic tasks
  5. 3845
    “…Comprehensive evaluation across diverse datasets indicates that our proposed model outperforms existing state-of-the-art prediction methods in off-target prediction. The datasets and source codes supporting this study can be found at https://github.com/Yang-k955/CRISPR-HW.…”
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    Online Artículo Texto
    Prediction of CRISPR-Cas9 off-target activities with mismatches and indels based on hybrid neural network
  6. 3846
    “…MIDAW is GPL licensed and freely accessible at . Perl and PHP source codes are available from the authors upon request.…”
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    MIDAW: a web tool for statistical analysis of microarray data
  7. 3847
    “…A novel adaptive source-channel coding with feedback for progressive transmission of medical images is proposed here. In the source coding part, the transmission starts from the region of interest (RoI). …”
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    An Adaptive Source-Channel Coding with Feedback for Progressive Transmission of Medical Images
  8. 3848
    “…CONCLUSIONS: Our model not only provides a suitable siRNA representation but also can predict siRNA efficacy more accurate and stable than most of state–of–the–art models. Source codes are freely available on the web at: http://www.jaist.ac.jp/\~bao/BiLTR/.…”
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    Online Artículo Texto
    A semi–supervised tensor regression model for siRNA efficacy prediction
  9. 3849
    “…A user-friendly graphical software to detect communities from multiplex networks, and corresponding C source codes, are available at GitHub (https://github.com/gilles-didier/MolTi).…”
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    Online Artículo Texto
    Identifying communities from multiplex biological networks
  10. 3850
    por Usama, Muhammad, Zakaria, Nordin
    Publicado 2017
    “…A simultaneous compression and encryption scheme is introduced that addresses an important implementation issue of source coding based on Tent Map and Piece-wise Linear Chaotic Map (PWLM), which is the infinite precision of real numbers that result from their long products. …”
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    Online Artículo Texto
    Chaos-Based Simultaneous Compression and Encryption for Hadoop
  11. 3851
    “…The current investigation expands the capability of an existing set of open-source codes, allowing generation of high-resolution 3D bedform architecture models. …”
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    Online Artículo Texto
    A method to generate small-scale, high-resolution sedimentary bedform architecture models representing realistic geologic facies
  12. 3852
    “…All the implemented source codes are freely available at https://github.com/LBBSoft/Trader.…”
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    Online Artículo Texto
    Trader as a new optimization algorithm predicts drug-target interactions efficiently
  13. 3853
    por Oh, Jihae, Lee, Chiwoo, Kaang, Bong-Kiun
    Publicado 2019
    “…In addition, the images from GECI signals can be analyzed with open source codes including constrained non-negative matrix factorization for endoscopy data (CNMF_E) and miniscope 1-photon-based calcium imaging signal extraction pipeline (MIN1PIPE), and considering parameters of the imaged brain regions (e.g., diameter or shape of soma or the resolution of recorded images), the real-time activity of each cell can be acquired and linked with animal behaviors. …”
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    Online Artículo Texto
    Imaging and analysis of genetically encoded calcium indicators linking neural circuits and behaviors
  14. 3854
    “…AVAILABILITY AND IMPLEMENTATION: DNABarcodeCompatibility can be easily extended to fulfil specific project needs. The source codes of the R-package and its user interfaces are publicly available along with documentation at [https://github.com/comoto-pasteur-fr] under the GPL-2 licence. …”
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    DNABarcodeCompatibility: an R-package for optimizing DNA-barcode combinations in multiplex sequencing experiments
  15. 3855
    “…Experiments on commonly used datasets show that our CNN-SVR system outperforms available state-of-the-art methods in terms of prediction accuracy, generalization, and robustness. Source codes are available at https://github.com/Peppags/CNN-SVR.…”
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    A Novel Hybrid CNN-SVR for CRISPR/Cas9 Guide RNA Activity Prediction
  16. 3856
    por Pastorello, Gilberto, Trotta, Carlo, Canfora, Eleonora, Chu, Housen, Christianson, Danielle, Cheah, You-Wei, Poindexter, Cristina, Chen, Jiquan, Elbashandy, Abdelrahman, Humphrey, Marty, Isaac, Peter, Polidori, Diego, Ribeca, Alessio, van Ingen, Catharine, Zhang, Leiming, Amiro, Brian, Ammann, Christof, Arain, M. Altaf, Ardö, Jonas, Arkebauer, Timothy, Arndt, Stefan K., Arriga, Nicola, Aubinet, Marc, Aurela, Mika, Baldocchi, Dennis, Barr, Alan, Beamesderfer, Eric, Marchesini, Luca Belelli, Bergeron, Onil, Beringer, Jason, Bernhofer, Christian, Berveiller, Daniel, Billesbach, Dave, Black, Thomas Andrew, Blanken, Peter D., Bohrer, Gil, Boike, Julia, Bolstad, Paul V., Bonal, Damien, Bonnefond, Jean-Marc, Bowling, David R., Bracho, Rosvel, Brodeur, Jason, Brümmer, Christian, Buchmann, Nina, Burban, Benoit, Burns, Sean P., Buysse, Pauline, Cale, Peter, Cavagna, Mauro, Cellier, Pierre, Chen, Shiping, Chini, Isaac, Christensen, Torben R., Cleverly, James, Collalti, Alessio, Consalvo, Claudia, Cook, Bruce D., Cook, David, Coursolle, Carole, Cremonese, Edoardo, Curtis, Peter S., D’Andrea, Ettore, da Rocha, Humberto, Dai, Xiaoqin, Davis, Kenneth J., De Cinti, Bruno, de Grandcourt, Agnes, De Ligne, Anne, De Oliveira, Raimundo C., Delpierre, Nicolas, Desai, Ankur R., Di Bella, Carlos Marcelo, di Tommasi, Paul, Dolman, Han, Domingo, Francisco, Dong, Gang, Dore, Sabina, Duce, Pierpaolo, Dufrêne, Eric, Dunn, Allison, Dušek, Jiří, Eamus, Derek, Eichelmann, Uwe, ElKhidir, Hatim Abdalla M., Eugster, Werner, Ewenz, Cacilia M., Ewers, Brent, Famulari, Daniela, Fares, Silvano, Feigenwinter, Iris, Feitz, Andrew, Fensholt, Rasmus, Filippa, Gianluca, Fischer, Marc, Frank, John, Galvagno, Marta, Gharun, Mana, Gianelle, Damiano, Gielen, Bert, Gioli, Beniamino, Gitelson, Anatoly, Goded, Ignacio, Goeckede, Mathias, Goldstein, Allen H., Gough, Christopher M., Goulden, Michael L., Graf, Alexander, Griebel, Anne, Gruening, Carsten, Grünwald, Thomas, Hammerle, Albin, Han, Shijie, Han, Xingguo, Hansen, Birger Ulf, Hanson, Chad, Hatakka, Juha, He, Yongtao, Hehn, Markus, Heinesch, Bernard, Hinko-Najera, Nina, Hörtnagl, Lukas, Hutley, Lindsay, Ibrom, Andreas, Ikawa, Hiroki, Jackowicz-Korczynski, Marcin, Janouš, Dalibor, Jans, Wilma, Jassal, Rachhpal, Jiang, Shicheng, Kato, Tomomichi, Khomik, Myroslava, Klatt, Janina, Knohl, Alexander, Knox, Sara, Kobayashi, Hideki, Koerber, Georgia, Kolle, Olaf, Kosugi, Yoshiko, Kotani, Ayumi, Kowalski, Andrew, Kruijt, Bart, Kurbatova, Julia, Kutsch, Werner L., Kwon, Hyojung, Launiainen, Samuli, Laurila, Tuomas, Law, Bev, Leuning, Ray, Li, Yingnian, Liddell, Michael, Limousin, Jean-Marc, Lion, Marryanna, Liska, Adam J., Lohila, Annalea, López-Ballesteros, Ana, López-Blanco, Efrén, Loubet, Benjamin, Loustau, Denis, Lucas-Moffat, Antje, Lüers, Johannes, Ma, Siyan, Macfarlane, Craig, Magliulo, Vincenzo, Maier, Regine, Mammarella, Ivan, Manca, Giovanni, Marcolla, Barbara, Margolis, Hank A., Marras, Serena, Massman, William, Mastepanov, Mikhail, Matamala, Roser, Matthes, Jaclyn Hatala, Mazzenga, Francesco, McCaughey, Harry, McHugh, Ian, McMillan, Andrew M. S., Merbold, Lutz, Meyer, Wayne, Meyers, Tilden, Miller, Scott D., Minerbi, Stefano, Moderow, Uta, Monson, Russell K., Montagnani, Leonardo, Moore, Caitlin E., Moors, Eddy, Moreaux, Virginie, Moureaux, Christine, Munger, J. William, Nakai, Taro, Neirynck, Johan, Nesic, Zoran, Nicolini, Giacomo, Noormets, Asko, Northwood, Matthew, Nosetto, Marcelo, Nouvellon, Yann, Novick, Kimberly, Oechel, Walter, Olesen, Jørgen Eivind, Ourcival, Jean-Marc, Papuga, Shirley A., Parmentier, Frans-Jan, Paul-Limoges, Eugenie, Pavelka, Marian, Peichl, Matthias, Pendall, Elise, Phillips, Richard P., Pilegaard, Kim, Pirk, Norbert, Posse, Gabriela, Powell, Thomas, Prasse, Heiko, Prober, Suzanne M., Rambal, Serge, Rannik, Üllar, Raz-Yaseef, Naama, Reed, David, de Dios, Victor Resco, Restrepo-Coupe, Natalia, Reverter, Borja R., Roland, Marilyn, Sabbatini, Simone, Sachs, Torsten, Saleska, Scott R., Sánchez-Cañete, Enrique P., Sanchez-Mejia, Zulia M., Schmid, Hans Peter, Schmidt, Marius, Schneider, Karl, Schrader, Frederik, Schroder, Ivan, Scott, Russell L., Sedlák, Pavel, Serrano-Ortíz, Penélope, Shao, Changliang, Shi, Peili, Shironya, Ivan, Siebicke, Lukas, Šigut, Ladislav, Silberstein, Richard, Sirca, Costantino, Spano, Donatella, Steinbrecher, Rainer, Stevens, Robert M., Sturtevant, Cove, Suyker, Andy, Tagesson, Torbern, Takanashi, Satoru, Tang, Yanhong, Tapper, Nigel, Thom, Jonathan, Tiedemann, Frank, Tomassucci, Michele, Tuovinen, Juha-Pekka, Urbanski, Shawn, Valentini, Riccardo, van der Molen, Michiel, van Gorsel, Eva, van Huissteden, Ko, Varlagin, Andrej, Verfaillie, Joseph, Vesala, Timo, Vincke, Caroline, Vitale, Domenico, Vygodskaya, Natalia, Walker, Jeffrey P., Walter-Shea, Elizabeth, Wang, Huimin, Weber, Robin, Westermann, Sebastian, Wille, Christian, Wofsy, Steven, Wohlfahrt, Georg, Wolf, Sebastian, Woodgate, William, Li, Yuelin, Zampedri, Roberto, Zhang, Junhui, Zhou, Guoyi, Zona, Donatella, Agarwal, Deb, Biraud, Sebastien, Torn, Margaret, Papale, Dario
    Publicado 2020
    “…This paper details this enhanced dataset and the processing methods, now made available as open-source codes, making the dataset more accessible, transparent, and reproducible.…”
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    The FLUXNET2015 dataset and the ONEFlux processing pipeline for eddy covariance data
  17. 3857
    “…AVAILABILITY AND IMPLEMENTATION: The source codes of PBSIM2 are freely available from https://github.com/yukiteruono/pbsim2. …”
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    PBSIM2: a simulator for long-read sequencers with a novel generative model of quality scores
  18. 3858
    “…Compared with the basic TLBO and seven state-of-the-art algorithms, the results illustrate that RLTLBO has superior performance and promising prospects for dealing with real-world optimization problems. The source codes of the RLTLBO are publicly available at https://github.com/WangShuang92/RLTLBO.…”
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    An Improved Teaching-Learning-Based Optimization Algorithm with Reinforcement Learning Strategy for Solving Optimization Problems
  19. 3859
    “…In addition, the probability of other attacks has also been discussed, and some suggestions for improvements are given. The source codes are publicly available and can be found online.…”
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    Cryptanalysis of an Image Encryption Algorithm Based on a 2D Hyperchaotic Map
  20. 3860
    “…Finally, on comparing the state-of-the-art tracking algorithms on the inland river ship datasets, the experimental results of the proposed algorithm show strong robustness in occlusion scenarios with an accuracy and success rate of 56.8% and 57.2% respectively. Supportive source codes for this research are publicly available at https://github.com/Libra-jing/SiamOL.…”
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    Online Artículo Texto
    Robust online learning based on siamese network for ship tracking
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