“…Additionally, RegulomePA provides a way to recover information on the regulatory circuits of the network to which a gene pertains and also makes available the source codes to analyze the topology of any other regulatory network. …”
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“…We then connect them to three information-theoretic coding problems, namely hypothesis testing against independence, noisy source coding, and dependence dilution. Leveraging these connections, we prove a new cardinality bound on the auxiliary variable in IB, making its computation more tractable for discrete random variables. …”
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“…The NHIA suggests that researchers release their source codes of algorithms so that other researchers can modify the codes to improve inter-study comparability. …”
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“…PHENSIM standalone Java application is available at https://github.com/alaimos/phensim, along with all data and source codes for benchmarking. A web-based user interface is accessible at https://phensim.tech/.…”
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“…AVAILABILITY AND IMPLEMENTATION: The C++ and python source codes of the Umibato software are available at https://github.com/shion-h/Umibato. …”
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“…We performed performance verification on two data sets and found that our coding scheme can represent sequence pair information effectively, and the CRISPR-IP model performance is better than others. Data and source codes are available at https://github.com/BioinfoVirgo/CRISPR-IP.…”
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“…Most of the studies involved the same cohort, with data from the OA initiative described in 46% of the articles and the MOST and Cohort Hip and Cohort Knee cohorts in 11% and 7%. Data and source codes were described as publicly available respectively in 54% and 22% of the articles. …”
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“…Data were extracted from 42/387 sources. Coding generated 3664 extracts of text across 160 themes. …”
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“…Experiments on the benchmark datasets demonstrate that the proposed DACPGTN model can achieve better prediction performance than the existing methods. The source codes of our method are available at https://github.com/Szhgege/DACPGTN.…”
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“…Furthermore, we demonstrated a tailor‐made ZETA pheromone bioproduction in yeast through metabolic engineering using this E12 desaturase, in combination with three genes from various sources coding for a Z9 desaturase, a fatty acyl reductase, and an acetyltransferase, respectively. …”
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“…AVAILABILITY AND IMPLEMENTATION: CanIsoNet is freely available at https://www.caniso.net. The source codes can be found under a Creative Common License at https://github.com/kahramanlab/CanIsoNet_Web. …”
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“…Data were transcribed verbatim and grouped according to data sources, coded, and analyzed thematically. RESULTS: Themes identified from the focus group discussions and interviews were categorized as student, teacher, and environmental factors. …”
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“…The web server and the source codes are freely accessible for public use at “http://rna.physics.missouri.edu”.…”
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“…Administrators can download the source codes to customize access settings for further development.…”
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“…MRMPlus may also be used for performance estimation for targeted assays not described by the Assay Development Working Group. MRMPlus’ source codes and compiled binaries can be freely downloaded from https://bitbucket.org/paiyetan/mrmplusgui and https://bitbucket.org/paiyetan/mrmplusgui/downloads respectively. …”
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“…In conclusion, the proposed methods are promising for the transposon-derived piRNA prediction. The source codes and datasets are available in S1 File.…”
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“…The generated atlases and major source codes of this study have been made publicly available at http://www.nitrc.org/projects/slic/.…”
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“…Scaffvis is free to use and its source codes have been published under an open source license. …”
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“…So, we propose the combination of source coding and channel coding techniques. The former ones are applied in the video encoding process by means of intra-refresh coding modes and tile-based frame partitioning techniques. …”
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“…Moreover, the case studies on lung neoplasms and prostate neoplasms also illustrate that BRWHNHA is superior to previous prediction methods and is more advantageous in exploring potential miRNAs related diseases. All source codes can be downloaded from https://github.com/myl446/BRWHNHA.…”
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