“…The results demonstrate that our algorithm obtains better results with respect to the results of the other algorithms in terms of time efficiency and the amount of similarity of estimated parameters to the original parameters and log-likelihood. The source code of our algorithm is available in https://github.com/emdadi/HMMPE.…”
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“…Results show that the proposed algorithm works faster in solving the control problem over these networks, while having similar accuracy, in comparison to previous exact methods. Source code and a simple web service of the proposed algorithm is available at http://goliaei.ir/net-control/www/.…”
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“…AVAILABILITY AND IMPLEMENTATION: The source code for the ShinyApps is available on GitHub (https://github.com/LacroixLaurent).…”
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“…AVAILABILITY AND IMPLEMENTATION: http://impute.varianteffect.org source code: https://github.com/joewuca/imputation. …”
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“…They go on to specify that being reproducible means that anything essential to the conclusion of the paper be freely accessible and states that source code must be provided. I submit that this definition of reproducibility is too narrow—that a cheminformatics method can only truly be replicated by reimplementing it from a detailed, step-by-step high-level description to determine how reliably the algorithm per se does what it is intended to do.…”
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“…AVAILABILITY AND IMPLEMENTATION: Source code and manual are freely available in https://github.com/AADavin/ZOMBI/. …”
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“…Documentation is provided at http://logomaker.readthedocs.io; source code is available at http://github.com/jbkinney/logomaker.…”
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“…AVAILABILITY AND IMPLEMENTATION: The R-scape web server is at eddylab.org/R-scape, with a link to download the source code. SUPPLEMENTARY INFORMATION: Supplementary data are available at Bioinformatics online.…”
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“…Publications may present software for which source code or documentation are or become unavailable; this compromises the role of peer review in evaluating technical strength and scientific contribution. …”
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“…For this purpose, the source code for the model is provided online.…”
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“…EXFI is written in Python, tested on Linux platforms, and the source code is available under the MIT License at https://github.com/jlanga/exfi.…”
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“…With an aim to contribute towards building new approaches for fault prediction, this paper proposes Entropy Churn Metrics (ECM) based on History Complexity Metrics (HCM) and Churn of Source Code Metrics (CHU). The study also compares performance of ECM with that of HCM. …”
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“…The projector augmented-wave (PAW) pseudopotentials were used in our calculation. The open source code QUANTUM ESPRESSSO was used with its pseudopotential database. …”
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“…AVAILABILITY AND IMPLEMENTATION: GTDB-Tk is implemented in Python and licenced under the GNU General Public Licence v3.0. Source code and documentation are available at: https://github.com/ecogenomics/gtdbtk. …”
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“…InEXEQ fulfilled the same role for the inelastic neutron scattering experiments. The source code of the software is licensed under the GNU General Public Licence 3, allowing it to be used by other facilities and adapted for use on other instruments.…”
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“…This article provides the 3-D printable open-source and the full source code firmware for the developing and under-resourced communities.…”
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“…AVAILABILITY AND IMPLEMENTATION: ARBitR is written and implemented in Python3 for Unix-based operative systems. All source code is available at https://github.com/markhilt/ARBitR under the GNU General Public License v3. …”
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“…AVAILABILITY AND IMPLEMENTATION: MEWpy can be installed from PyPi (pip install mewpy), the source code being available at https://github.com/BioSystemsUM/mewpy under the GPL license.…”
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“…In addition to the theoretical definitions, we also provide an algorithm (and the source code) to efficiently construct any propositional kernel. …”
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“…After analyzing the FOSS activities on the projects and organizations level, such as commits frequency, source code lines, and code comments, we find that there is less activity now than there was a decade ago. …”
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