“…AVAILABILITY AND IMPLEMENTATION: MESA is available at mesa.mosla.de, with the source code available at github.com/umr-ds/mesa_dna_sim. …”
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“…AVAILABILITY AND IMPLEMENTATION: MaveQuest service: https://mavequest.varianteffect.org/. MaveQuest source code: https://github.com/kvnkuang/mavequest-front-end/. …”
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“…The FHIR implementation is realized as an XNAT plugin (Source code: https://github.com/somnonetz/xnat-fhir-plugin), that allows easy adoption in arbitrary XNAT instances. …”
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“…In contrast to existing hybrid fuzzers, that operate directly on binaries, LibKluzzer leverages the LLVM compiler framework to work at the source code level. It employs LibFuzzer as the coverage-guided fuzzing component and KLUZZER, an extension of KLEE, as the whitebox fuzzing component.…”
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“…We present AVR, a push-button model checker for verifying state transition systems directly at the source-code level. AVR uses information embedded in the word-level syntax of the design representation to automatically perform scalable model checking by combining a novel syntax-guided abstraction-refinement technique with a word-level implementation of the IC3 algorithm. …”
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“…BANΔIT is available online at https://bandit.uni‐mainz.de. The source code can be downloaded from https://github.com/FBarthels/BANDIT.…”
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“…In this practice, sound synthesis algorithms are programmed in real time by means of source code. To facilitate this, one possibility is to automatically create variations out of a few synthesizer presets. …”
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“…AVAILABILITY AND IMPLEMENTATION: The source code of Kalign and code to reproduce the results are found here: https://github.com/timolassmann/kalign.…”
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“…AVAILABILITY AND IMPLEMENTATION: A publicly accessible version of Gene Teller is available as an Alexa Skill from the Amazon Marketplace at https://www.amazon.com/dp/B08BRD8SS8. The source code is freely available on GitHub at https://github.com/solinvicta/geneTeller.…”
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“…Application to synthetic and real data from bacterial isolate genomes show improved accuracy while still maintaining a low computational cost. npGraph also provides a graphical user interface (GUI) which provides a real-time visualisation of the progress of assembly. The tool and source code is available at https://github.com/hsnguyen/assembly.…”
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“…Both packages have been installed >1 million times via Bioconda. The source code and documentation are available from https://www.htslib.org.…”
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“…Finally, BarDensr is fast and parallelizable. We provide open-source code as well as an implementation for the ‘NeuroCAAS’ cloud platform.…”
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“…We show how to define forward- and reverse-mode automatic differentiation source-code transformations or on a standard higher-order functional language. …”
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“…AVAILABILITY AND IMPLEMENTATION: The source code and user’s guide of DysRegSig are freely available at Github: https://github.com/SCBIT-YYLab/DysRegSig. …”
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“…The automated causation inference tool, as well as the source code, are freely available at http://causalpath.org.…”
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“…Nevertheless, and as the fourth feature, we make available both the datasets and the source code to allow for more objective comparisons of approaches, including our own.…”
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“…To help researchers adopt the method, open-source code is provided that can be run on either central processing units (CPUs) or graphics processing units (GPUs).…”
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“…AVAILABILITY AND IMPLEMENTATION: orfipy is implemented in python and is compatible with python v3.6 and higher. Source code: https://github.com/urmi-21/orfipy. Installation: from the source, or via PyPi (https://pypi.org/project/orfipy) or bioconda (https://anaconda.org/bioconda/orfipy). …”
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“…AVAILABILITY AND IMPLEMENTATION: BART3D is implemented in Python and the source code is available at https://github.com/zanglab/bart3d. …”
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“…Finally, memes provides data visualization capabilities to facilitate communication of results. memes is available as a Bioconductor package at https://bioconductor.org/packages/memes, and the source code can be found at github.com/snystrom/memes.…”
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