“…Current security research utilizes source code analysis and manual exploitation of web applications, to identify security vulnerabilities, such as Cross-Site Scripting (XSS) and SQL Injection, in these emerging fields. …”
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“…AVAILABILITY AND IMPLEMENTATION: Open-source code and sample data provided at https://github.com/kwu14victor/ApoBDproject.…”
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“…New and previously described expression patterns in both species are discovered, the majority of which are biologically meaningful and exhibit statistically significant gene function enrichment. Software and source code implementing the algorithm, SSClust, is freely available ().…”
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“…MicroTar does not rely on evolutionary conservation to discern functional targets, and is able to predict both conserved and non-conserved targets. MicroTar source code and predictions are accessible at , where both serial and parallel versions of the program can be downloaded under an open-source licence. …”
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“…The software is donated to the public domain. Source code and a Linux binary are freely available at .…”
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“…These applications cover from array normalization to imputation and preprocessing, differential gene expression analysis, class and survival prediction and aCGH analysis. The source code is available, allowing for extention and reuse of the software. …”
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“…The tool is available as source code, binary executable, online tool or as Web Service. …”
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“…The relative performance of the tested languages did not change from Windows to Linux and no clear evidence of a faster operating system was found. Source code and additional information are available from CONCLUSION: This benchmark provides a comparison of six commonly used programming languages under two different operating systems. …”
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“…It can be used as a command-line program, a web application, or a utility library. Source code in C, Java, and C#, and integration instructions for Perl and Python are provided. …”
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“…CONCLUSION: We have provided the design, analysis and implementation of a new algorithm for calculating the edit distance of two strings with both theoretical and practical implications. Source code of our algorithm is available online.…”
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“…Availability: A web server, C++ source code and binaries are available under MIT license at http://noble.gs.washington.edu/proj/qvality Contact: lukas.kall@cbr.su.se Supplementary information: Supplementary data are available at Bioinformatics online.…”
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“…AVAILABILITY: The BOWiki and supplementary material is available at . The source code is available under the GNU GPL from .…”
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“…As an introduction to our ongoing efforts to develop Python software tools for structural and functional neuroimaging, we discuss: (i) the role of non-invasive diffuse optical imaging in measuring brain function, (ii) the key computational requirements to support NIN experiments, (iii) our collection of software tools to support NIN, called NinPy, and (iv) future extensions of these tools that will allow integration of optical with other structural and functional neuroimaging data sources. Source code for the software discussed here will be made available at www.nmr.mgh.harvard.edu/Neural_SystemsGroup/software.html.…”
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“…Availability: ChromA is available at http://bibiserv.techfak.uni-bielefeld.de/chroma. Executables and source code under the L-GPL v3 license are provided for download at the same location. …”
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“…For this the Python scripting language is the optimal choice since its philosophy is to write an understandable source code. RESULTS: p3d is an object oriented Python module that adds a simple yet powerful interface to the Python interpreter to process and analyse three dimensional protein structure files (PDB files). p3d's strength arises from the combination of a) very fast spatial access to the structural data due to the implementation of a binary space partitioning (BSP) tree, b) set theory and c) functions that allow to combine a and b and that use human readable language in the search queries rather than complex computer language. …”
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“…Availability and Implementation: Source code and binaries are freely available for download at http://diprogb.fli-leibniz.de, implemented in C++ and supported on MS Windows and Linux (using e.g. …”
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“…Availability: Executables, source code, and exon-junction libraries are available from http://grimmond.imb.uq.edu.au/RNA-MATE/ Contact: n.cloonan@imb.uq.edu.au Supplementary information: Supplementary data are available at Bioinformatics Online.…”
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“…Protocols for transferring data to durable archives at the European Bioinformatics Institute have been implemented. Availability: The source code, documentation and initialization scripts are available at http://simbioms.org. …”
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“…The improvements in both accuracy and speed of the macromolecular surface determination should make EDTSurf a useful tool for the detailed study of protein docking and structure predictions. Both source code and the executable program of EDTSurf are freely available at http://zhang.bioinformatics.ku.edu/EDTSurf.…”
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