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Mostrando 921 - 940 Resultados de 4,087 Para Buscar '"Source Code"', tiempo de consulta: 0.34s Limitar resultados
  1. 921
    por Kim, Charles C, DeRisi, Joseph L
    Publicado 2010
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    VersaCount: customizable manual tally software for cell counting
  2. 922
    “…RESULTS: The Word add-in presented here will assist authors in this effort by automatically recognizing and highlighting words or phrases that are likely information-rich, allowing authors to associate semantic data with those words or phrases, and to embed that data in the document as XML. The add-in and source code are publicly available at http://www.codeplex.com/UCSDBioLit. …”
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    Word add-in for ontology recognition: semantic enrichment of scientific literature
  3. 923
    “…Availability: Implemented in C++, supersplat source code and binaries are freely available on the web at http://mocklerlab-tools.cgrb.oregonstate.edu/ Contact: tmockler@cgrb.oregonstate.edu…”
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    Supersplat—spliced RNA-seq alignment
  4. 924
    “…An experimental metagenome dataset was then used to show that FACS achieves comparable accuracy as BLAT and SSAHA2 but is at least 21 times faster in classifying sequences. Availability: Source code for FACS, Bloom filters and MetaSim dataset used is available at http://facs.biotech.kth.se. …”
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    Classification of DNA sequences using Bloom filters
  5. 925
    “…The WAMI web-interface and the source code of the underlying programs are available at http://www.nubios.nileu.edu.eg/tools/wami.…”
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    WAMI: a web server for the analysis of minisatellite maps
  6. 926
    por Loman, Nicholas J, Pallen, Mark J
    Publicado 2010
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    EntrezAJAX: direct web browser access to the Entrez Programming Utilities
  7. 927
    “…Evaluations on several widely used benchmark sets show that PicXAA constantly yields accurate alignment results on a wide range of reference sets, with especially remarkable improvements over other leading algorithms on sequence sets with local similarities. PicXAA source code is freely available at: http://www.ece.tamu.edu/∼bjyoon/picxaa/.…”
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    PicXAA: greedy probabilistic construction of maximum expected accuracy alignment of multiple sequences
  8. 928
    “…Implementation: The software was implemented in Groovy and JAVA, the web frontend was implemented in GRAILS and the database used was PostgreSQL. Availability: The source code and an online web interface are freely available. …”
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    The Chemical Translation Service—a web-based tool to improve standardization of metabolomic reports
  9. 929
    “…Availability: The SmashCell source code and a comprehensive manual are available at http://asiago.stanford.edu/SmashCell Contact: eoghanh@stanford.edu Supplementary information: Supplementary data are available at Bioinformatics online.…”
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    SmashCell: a software framework for the analysis of single-cell amplified genome sequences
  10. 930
    “…Availability: GimmeMotifs is implemented in Python and runs on Linux. The source code is freely available for download at http://www.ncmls.eu/bioinfo/gimmemotifs/. …”
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    GimmeMotifs: a de novo motif prediction pipeline for ChIP-sequencing experiments
  11. 931
    “…The source codes are also available at SourceForge http://sourceforge.net/projects/epistasis/.…”
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    Tools for efficient epistasis detection in genome-wide association study
  12. 932
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    WebGimm: An integrated web-based platform for cluster analysis, functional analysis, and interactive visualization of results
  13. 933
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    Parallel biocomputing
  14. 934
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    Creating web applications for spatial epidemiological analysis and mapping in R using Rwui
  15. 935
    por Choi, Kwangbom, Gomez, Shawn M
    Publicado 2009
    “…CONCLUSIONS: These approaches provide additional tools for the study of phylogenetic trees and associated evolutionary processes. Source code is available at http://gomezlab.bme.unc.edu/tools.…”
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    Comparison of phylogenetic trees through alignment of embedded evolutionary distances
  16. 936
    “…Designed to interface with standard bioinformatics components, such as DAS servers and Ensembl databases, it is easy to setup and configure for different genome projects. The source code is available at http://annotrack.sanger.ac.uk.…”
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    AnnoTrack - a tracking system for genome annotation
  17. 937
    “…When used in conjunction with training data such as a high-quality reference genome and sequence reads from the same organism, our program can be used to manually identify an optimal sequencing and assembly strategy for de novo sequencing of related organisms. Availability: GPL source code and a usage tutorial is at http://ngopt.googlecode.com Contact: aarondarling@ucdavis.edu Supplementary information: Supplementary data is available at Bioinformatics online.…”
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    Mauve Assembly Metrics
  18. 938
    “…Despite this need, very few entity normalization systems are publicly available as source code or web services for biomedical text mining. …”
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    The GNAT library for local and remote gene mention normalization
  19. 939
    “…Speedup and other related performance studies are also reported on a 400-core Hadoop cluster using spectral datasets from environmental microbial communities as inputs. Availability: The source code along with user documentation are available on http://compbio.eecs.wsu.edu/MR-MSPolygraph. …”
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    MapReduce implementation of a hybrid spectral library-database search method for large-scale peptide identification
  20. 940
    “…Furthermore, the working group recommended that all data models and software source code should be made visible in public repositories to allow a coordinated effort on the use of common data structures and file formats.…”
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    Bioinformatics tools and database resources for systems genetics analysis in mice—a short review and an evaluation of future needs
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