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81“…In this article, we introduce a meta-analysis software, MetaMSD (Meta Analysis for Mass Spectrometry Data) that is specifically designed for mass spectrometry data. Using Stouffer’s or Pearson’s test, MetaMSD detects significantly more differential proteins than the analysis based on the single best experiment. …”
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82por Hudson, Lawrence N., Newbold, Tim, Contu, Sara, Hill, Samantha L. L., Lysenko, Igor, De Palma, Adriana, Phillips, Helen R. P., Alhusseini, Tamera I., Bedford, Felicity E., Bennett, Dominic J., Booth, Hollie, Burton, Victoria J., Chng, Charlotte W. T., Choimes, Argyrios, Correia, David L. P., Day, Julie, Echeverría‐Londoño, Susy, Emerson, Susan R., Gao, Di, Garon, Morgan, Harrison, Michelle L. K., Ingram, Daniel J., Jung, Martin, Kemp, Victoria, Kirkpatrick, Lucinda, Martin, Callum D., Pan, Yuan, Pask‐Hale, Gwilym D., Pynegar, Edwin L., Robinson, Alexandra N., Sanchez‐Ortiz, Katia, Senior, Rebecca A., Simmons, Benno I., White, Hannah J., Zhang, Hanbin, Aben, Job, Abrahamczyk, Stefan, Adum, Gilbert B., Aguilar‐Barquero, Virginia, Aizen, Marcelo A., Albertos, Belén, Alcala, E. L., del Mar Alguacil, Maria, Alignier, Audrey, Ancrenaz, Marc, Andersen, Alan N., Arbeláez‐Cortés, Enrique, Armbrecht, Inge, Arroyo‐Rodríguez, Víctor, Aumann, Tom, Axmacher, Jan C., Azhar, Badrul, Azpiroz, Adrián B., Baeten, Lander, Bakayoko, Adama, Báldi, András, Banks, John E., Baral, Sharad K., Barlow, Jos, Barratt, Barbara I. P., Barrico, Lurdes, Bartolommei, Paola, Barton, Diane M., Basset, Yves, Batáry, Péter, Bates, Adam J., Baur, Bruno, Bayne, Erin M., Beja, Pedro, Benedick, Suzan, Berg, Åke, Bernard, Henry, Berry, Nicholas J., Bhatt, Dinesh, Bicknell, Jake E., Bihn, Jochen H., Blake, Robin J., Bobo, Kadiri S., Bóçon, Roberto, Boekhout, Teun, Böhning‐Gaese, Katrin, Bonham, Kevin J., Borges, Paulo A. V., Borges, Sérgio H., Boutin, Céline, Bouyer, Jérémy, Bragagnolo, Cibele, Brandt, Jodi S., Brearley, Francis Q., Brito, Isabel, Bros, Vicenç, Brunet, Jörg, Buczkowski, Grzegorz, Buddle, Christopher M., Bugter, Rob, Buscardo, Erika, Buse, Jörn, Cabra‐García, Jimmy, Cáceres, Nilton C., Cagle, Nicolette L., Calviño‐Cancela, María, Cameron, Sydney A., Cancello, Eliana M., Caparrós, Rut, Cardoso, Pedro, Carpenter, Dan, Carrijo, Tiago F., Carvalho, Anelena L., Cassano, Camila R., Castro, Helena, Castro‐Luna, Alejandro A., Rolando, Cerda B., Cerezo, Alexis, Chapman, Kim Alan, Chauvat, Matthieu, Christensen, Morten, Clarke, Francis M., Cleary, Daniel F.R., Colombo, Giorgio, Connop, Stuart P., Craig, Michael D., Cruz‐López, Leopoldo, Cunningham, Saul A., D'Aniello, Biagio, D'Cruze, Neil, da Silva, Pedro Giovâni, Dallimer, Martin, Danquah, Emmanuel, Darvill, Ben, Dauber, Jens, Davis, Adrian L. V., Dawson, Jeff, de Sassi, Claudio, de Thoisy, Benoit, Deheuvels, Olivier, Dejean, Alain, Devineau, Jean‐Louis, Diekötter, Tim, Dolia, Jignasu V., Domínguez, Erwin, Dominguez‐Haydar, Yamileth, Dorn, Silvia, Draper, Isabel, Dreber, Niels, Dumont, Bertrand, Dures, Simon G., Dynesius, Mats, Edenius, Lars, Eggleton, Paul, Eigenbrod, Felix, Elek, Zoltán, Entling, Martin H., Esler, Karen J., de Lima, Ricardo F., Faruk, Aisyah, Farwig, Nina, Fayle, Tom M., Felicioli, Antonio, Felton, Annika M., Fensham, Roderick J., Fernandez, Ignacio C., Ferreira, Catarina C., Ficetola, Gentile F., Fiera, Cristina, Filgueiras, Bruno K. C., Fırıncıoğlu, Hüseyin K., Flaspohler, David, Floren, Andreas, Fonte, Steven J., Fournier, Anne, Fowler, Robert E., Franzén, Markus, Fraser, Lauchlan H., Fredriksson, Gabriella M., Freire, Geraldo B., Frizzo, Tiago L. M., Fukuda, Daisuke, Furlani, Dario, Gaigher, René, Ganzhorn, Jörg U., García, Karla P., Garcia‐R, Juan C., Garden, Jenni G., Garilleti, Ricardo, Ge, Bao‐Ming, Gendreau‐Berthiaume, Benoit, Gerard, Philippa J., Gheler‐Costa, Carla, Gilbert, Benjamin, Giordani, Paolo, Giordano, Simonetta, Golodets, Carly, Gomes, Laurens G. L., Gould, Rachelle K., Goulson, Dave, Gove, Aaron D., Granjon, Laurent, Grass, Ingo, Gray, Claudia L., Grogan, James, Gu, Weibin, Guardiola, Moisès, Gunawardene, Nihara R., Gutierrez, Alvaro G., Gutiérrez‐Lamus, Doris L., Haarmeyer, Daniela H., Hanley, Mick E., Hanson, Thor, Hashim, Nor R., Hassan, Shombe N., Hatfield, Richard G., Hawes, Joseph E., Hayward, Matt W., Hébert, Christian, Helden, Alvin J., Henden, John‐André, Henschel, Philipp, Hernández, Lionel, Herrera, James P., Herrmann, Farina, Herzog, Felix, Higuera‐Diaz, Diego, Hilje, Branko, Höfer, Hubert, Hoffmann, Anke, Horgan, Finbarr G., Hornung, Elisabeth, Horváth, Roland, Hylander, Kristoffer, Isaacs‐Cubides, Paola, Ishida, Hiroaki, Ishitani, Masahiro, Jacobs, Carmen T., Jaramillo, Víctor J., Jauker, Birgit, Hernández, F. Jiménez, Johnson, McKenzie F., Jolli, Virat, Jonsell, Mats, Juliani, S. Nur, Jung, Thomas S., Kapoor, Vena, Kappes, Heike, Kati, Vassiliki, Katovai, Eric, Kellner, Klaus, Kessler, Michael, Kirby, Kathryn R., Kittle, Andrew M., Knight, Mairi E., Knop, Eva, Kohler, Florian, Koivula, Matti, Kolb, Annette, Kone, Mouhamadou, Kőrösi, Ádám, Krauss, Jochen, Kumar, Ajith, Kumar, Raman, Kurz, David J., Kutt, Alex S., Lachat, Thibault, Lantschner, Victoria, Lara, Francisco, Lasky, Jesse R., Latta, Steven C., Laurance, William F., Lavelle, Patrick, Le Féon, Violette, LeBuhn, Gretchen, Légaré, Jean‐Philippe, Lehouck, Valérie, Lencinas, María V., Lentini, Pia E., Letcher, Susan G., Li, Qi, Litchwark, Simon A., Littlewood, Nick A., Liu, Yunhui, Lo‐Man‐Hung, Nancy, López‐Quintero, Carlos A., Louhaichi, Mounir, Lövei, Gabor L., Lucas‐Borja, Manuel Esteban, Luja, Victor H., Luskin, Matthew S., MacSwiney G, M Cristina, Maeto, Kaoru, Magura, Tibor, Mallari, Neil Aldrin, Malone, Louise A., Malonza, Patrick K., Malumbres‐Olarte, Jagoba, Mandujano, Salvador, Måren, Inger E., Marin‐Spiotta, Erika, Marsh, Charles J., Marshall, E. J. P., Martínez, Eliana, Martínez Pastur, Guillermo, Moreno Mateos, David, Mayfield, Margaret M., Mazimpaka, Vicente, McCarthy, Jennifer L., McCarthy, Kyle P., McFrederick, Quinn S., McNamara, Sean, Medina, Nagore G., Medina, Rafael, Mena, Jose L., Mico, Estefania, Mikusinski, Grzegorz, Milder, Jeffrey C., Miller, James R., Miranda‐Esquivel, Daniel R., Moir, Melinda L., Morales, Carolina L., Muchane, Mary N., Muchane, Muchai, Mudri‐Stojnic, Sonja, Munira, A. Nur, Muoñz‐Alonso, Antonio, Munyekenye, B. F., Naidoo, Robin, Naithani, A., Nakagawa, Michiko, Nakamura, Akihiro, Nakashima, Yoshihiro, Naoe, Shoji, Nates‐Parra, Guiomar, Navarrete Gutierrez, Dario A., Navarro‐Iriarte, Luis, Ndang'ang'a, Paul K., Neuschulz, Eike L., Ngai, Jacqueline T., Nicolas, Violaine, Nilsson, Sven G., Noreika, Norbertas, Norfolk, Olivia, Noriega, Jorge Ari, Norton, David A., Nöske, Nicole M., Nowakowski, A. Justin, Numa, Catherine, O'Dea, Niall, O'Farrell, Patrick J., Oduro, William, Oertli, Sabine, Ofori‐Boateng, Caleb, Oke, Christopher Omamoke, Oostra, Vicencio, Osgathorpe, Lynne M., Otavo, Samuel Eduardo, Page, Navendu V., Paritsis, Juan, Parra‐H, Alejandro, Parry, Luke, Pe'er, Guy, Pearman, Peter B., Pelegrin, Nicolás, Pélissier, Raphaël, Peres, Carlos A., Peri, Pablo L., Persson, Anna S., Petanidou, Theodora, Peters, Marcell K., Pethiyagoda, Rohan S., Phalan, Ben, Philips, T. Keith, Pillsbury, Finn C., Pincheira‐Ulbrich, Jimmy, Pineda, Eduardo, Pino, Joan, Pizarro‐Araya, Jaime, Plumptre, A. J., Poggio, Santiago L., Politi, Natalia, Pons, Pere, Poveda, Katja, Power, Eileen F., Presley, Steven J., Proença, Vânia, Quaranta, Marino, Quintero, Carolina, Rader, Romina, Ramesh, B. R., Ramirez‐Pinilla, Martha P., Ranganathan, Jai, Rasmussen, Claus, Redpath‐Downing, Nicola A., Reid, J. Leighton, Reis, Yana T., Rey Benayas, José M., Rey‐Velasco, Juan Carlos, Reynolds, Chevonne, Ribeiro, Danilo Bandini, Richards, Miriam H., Richardson, Barbara A., Richardson, Michael J., Ríos, Rodrigo Macip, Robinson, Richard, Robles, Carolina A., Römbke, Jörg, Romero‐Duque, Luz Piedad, Rös, Matthias, Rosselli, Loreta, Rossiter, Stephen J., Roth, Dana S., Roulston, T'ai H., Rousseau, Laurent, Rubio, André V., Ruel, Jean‐Claude, Sadler, Jonathan P., Sáfián, Szabolcs, Saldaña‐Vázquez, Romeo A., Sam, Katerina, Samnegård, Ulrika, Santana, Joana, Santos, Xavier, Savage, Jade, Schellhorn, Nancy A., Schilthuizen, Menno, Schmiedel, Ute, Schmitt, Christine B., Schon, Nicole L., Schüepp, Christof, Schumann, Katharina, Schweiger, Oliver, Scott, Dawn M., Scott, Kenneth A., Sedlock, Jodi L., Seefeldt, Steven S., Shahabuddin, Ghazala, Shannon, Graeme, Sheil, Douglas, Sheldon, Frederick H., Shochat, Eyal, Siebert, Stefan J., Silva, Fernando A. B., Simonetti, Javier A., Slade, Eleanor M., Smith, Jo, Smith‐Pardo, Allan H., Sodhi, Navjot S., Somarriba, Eduardo J., Sosa, Ramón A., Soto Quiroga, Grimaldo, St‐Laurent, Martin‐Hugues, Starzomski, Brian M., Stefanescu, Constanti, Steffan‐Dewenter, Ingolf, Stouffer, Philip C., Stout, Jane C., Strauch, Ayron M., Struebig, Matthew J., Su, Zhimin, Suarez‐Rubio, Marcela, Sugiura, Shinji, Summerville, Keith S., Sung, Yik‐Hei, Sutrisno, Hari, Svenning, Jens‐Christian, Teder, Tiit, Threlfall, Caragh G., Tiitsaar, Anu, Todd, Jacqui H., Tonietto, Rebecca K., Torre, Ignasi, Tóthmérész, Béla, Tscharntke, Teja, Turner, Edgar C., Tylianakis, Jason M., Uehara‐Prado, Marcio, Urbina‐Cardona, Nicolas, Vallan, Denis, Vanbergen, Adam J., Vasconcelos, Heraldo L., Vassilev, Kiril, Verboven, Hans A. F., Verdasca, Maria João, Verdú, José R., Vergara, Carlos H., Vergara, Pablo M., Verhulst, Jort, Virgilio, Massimiliano, Vu, Lien Van, Waite, Edward M., Walker, Tony R., Wang, Hua‐Feng, Wang, Yanping, Watling, James I., Weller, Britta, Wells, Konstans, Westphal, Catrin, Wiafe, Edward D., Williams, Christopher D., Willig, Michael R., Woinarski, John C. Z., Wolf, Jan H. D., Wolters, Volkmar, Woodcock, Ben A., Wu, Jihua, Wunderle, Joseph M., Yamaura, Yuichi, Yoshikura, Satoko, Yu, Douglas W., Zaitsev, Andrey S., Zeidler, Juliane, Zou, Fasheng, Collen, Ben, Ewers, Rob M., Mace, Georgina M., Purves, Drew W., Scharlemann, Jörn P. W., Purvis, AndyEnlace del recurso
Publicado 2016
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83por Charlesworth, Jac C, Peralta, Juan M, Drigalenko, Eugene, Göring, Harald HH, Almasy, Laura, Dyer, Thomas D, Blangero, John“…Then we formally combine the association test results with genome-wide transcriptional profiling data for high-density lipoprotein cholesterol (HDL-C), from the San Antonio Family Heart Study, using a Z-transform test (Stouffer's method). RESULTS: We identified 39 genes by the joint test at a conservative 1% false-discovery rate, including 9 from the significant gene-based association test and 23 whose expression was significantly correlated with HDL-C. …”
Publicado 2009
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84por Lin, Ping-I, Kuo, Po-Hsiu, Chen, Chia-Hsiang, Wu, Jer-Yuarn, Gau, Susan S-F., Wu, Yu-Yu, Liu, Shih-Kai“…The same ROH region was also nominally significantly associated with speech delay in another independent sample (p = 0.037; combinatorial analysis Stouffer’s z trend = 0.0005). Taken together, our findings suggest that extended recessive loci on 11q22.3 may play a role in language impairment in autism. …”
Publicado 2013
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85por Hosang, Georgina M, Shiles, Celia, Tansey, Katherine E, McGuffin, Peter, Uher, Rudolf“…A total of 22 studies with a pooled total of 14,233 participants met the inclusion criteria, the results of which were combined and a meta-analysis performed using the Liptak-Stouffer z-score method. RESULTS: The results suggest that the Met allele of BDNF Val66Met significantly moderates the relationship between life stress and depression (P = 0.03). …”
Publicado 2014
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86“…We considered Fisher’s method, minimum value of p method, Simes method, Stouffer’s method, Kost method, and Cauchy combination test. …”
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87“…Data from three independent datasets (GSE38010, GSE32915, and GSE108000) were combined and used to detect novel DEGs using the Stouffer’s Z-score method. Corresponding regulatory pathways were analysed using the Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway databases. …”
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88“…The comparison of different methods suggests to use Stouffer’s method for this purpose. The study has been conducted on gene expression experiments investigating human joint cartilage samples of Osteoarthritis related groups: a cDNA microarray (83 samples, four groups) and an Affymetrix (26 samples, two groups) data set. …”
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89por Utsunomiya, Yuri Tani, Pérez O’Brien, Ana Maria, Sonstegard, Tad Stewart, Van Tassell, Curtis Paul, do Carmo, Adriana Santana, Mészáros, Gábor, Sölkner, Johann, Garcia, José Fernando“…In this paper, a straightforward frequentist approach based on the Stouffer Method to combine P-values across different tests for evidence of recent positive selection in common variations, as well as strategies for extracting biological information from the detected signals, were described and applied to high density single nucleotide polymorphism (SNP) data generated from dairy and beef cattle (taurine and indicine). …”
Publicado 2013
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90por Willis, Scooter, Villalobos, Victor M., Gevaert, Olivier, Abramovitz, Mark, Williams, Casey, Sikic, Branimir I., Leyland-Jones, Brian“…Genes were ranked by p-value using Stouffer’s method and selected for statistical significance with a false discovery rate (FDR) <.05 using the Benjamini-Hochberg method. …”
Publicado 2016
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91“…We conducted the meta-analysis using Fisher, roP, Stouffer, AW, SR, PR and RP methods in MetaDE package. …”
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92“…First, we transformed the gene expression profile of every sample into normalized percentile ranks to obtain platform-agnostic features. Second, we used Stouffer’s meta-z approach in combination with Harrell’s concordance index to prioritize and select genes to be included in the model. …”
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93por Ma, Lijun, Mondal, Ashis K., Murea, Mariana, Sharma, Neeraj K., Tönjes, Anke, Langberg, Kurt A., Das, Swapan K., Franks, Paul W., Kovacs, Peter, Antinozzi, Peter A., Stumvoll, Michael, Parks, John S., Elbein, Steven C., Freedman, Barry I.“…RESULTS: ACACB transcribed SNP rs2075260 (A/G) was associated with adipose ACACB messenger RNA expression in EAs and AAs (p = 3.8×10(−5), dominant model in meta-analysis, Stouffer method), with the (A) allele representing lower gene expression in adipose and higher insulin sensitivity in EAs (p = 0.04). …”
Publicado 2011
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94“…Using the method of Stouffer, Z-scores were calculated to examine selective-reporting bias. …”
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95por Zhao, Mingzhe, Yang, Jiarun, Wang, Wenbo, Ma, Jingsong, Zhang, Jian, Zhao, Xueyan, Qiu, Xiaohui, Yang, Xiuxian, Qiao, Zhengxue, Song, Xuejia, Wang, Lin, Jiang, Shixiang, Zhao, Erying, Yang, Yanjie“…We reviewed all relevant studies published in English before May 2016. The Lipták–Stouffer z-score method for meta-analysis was applied to combined data. …”
Publicado 2017
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96por Brunoro, Giselle Villa Flor, Carvalho, Paulo Costa, Barbosa, Valmir C., Pagnoncelli, Dante, De Moura Gallo, Claudia Vitória, Perales, Jonas, Zahedi, René Peiman, Valente, Richard Hemmi, Neves-Ferreira, Ana Gisele da Costa“…METHODS: The software is based on a peptide-centric approach and uses the binomial distribution to attribute a probability for each peptide as being linked to the disease; these probabilities are propagated to a final protein p-value according to the Stouffer’s Z-score method. RESULTS: A total of 1227 proteins were identified and quantified, of which 87 were differentially abundant, being mainly involved in glycolysis (Warburg effect) and immune system activation (activated stroma). …”
Publicado 2019
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97por Ma, Jingsong, Zhao, Mingzhe, Zhou, Wei, Li, Mo, Huai, Cong, Shen, Lu, Wang, Ting, Wu, Hao, Zhang, Na, Zhang, Zhiruo, He, Lin, Qin, Shengying“…METHODS: Searches of PubMed, Web of Science, EMBASE, OVID, Google Scholar, and Baidu Scholar databases yielded 30 peer-reviewed studies published before January 2020 with a pooled total of 6291 participants. The Lipták-Stouffer Z score method for meta-analysis was applied to combine data. …”
Publicado 2021
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98por Hain, Daniel T., Al Habbab, Talal, Cogan, Elizabeth S., Johnson, Holly L., Law, Rebecca A., Lewis, David J.“…G-allele carriers experienced significantly greater improvements in ADHD symptom scores (Swanson, Nolan, and Pelham Version-IV Scale or ADHD Rating Scale-IV) relative to noncarriers (odds ratio 3.08, 95% confidence interval 1.71–5.56, p = .0002) and greater response rates as measured by a ≥50% improvement in symptom scores (odds ratio 2.68, 95% confidence interval 1.23–5.82, p = .01); no significant difference in response rate as measured by Clinical Global Impressions score ≤2 was found. Stouffer’s z-score method showed significant improvement across all methylphenidate outcomes in G-allele carriers relative to noncarriers (z = 3.03, p = .002). …”
Publicado 2021
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99por Antoun, E, Titcombe, P, Dalrymple, K, Kitaba, NT, Barton, SJ, Flynn, Ac, Murray, R, Garratt, ES, Seed, PT, White, SL, Cooper, Cyrus, Inskip, H M, Hanson, M, Poston, L, Godfrey, KM, Lillycrop, KA“…Adjusting for gestational age and other covariates, an epigenome-wide association study identified 2911 (FDR≤0.05) and 236 (Bonferroni corrected p ≤ 6.45×10−8) differentially methylated CpGs (dmCpGs), and 1230 differentially methylated regions (DMRs) (Stouffer ≤0.05) associated with birthweight. The top birthweight-associated dmCpG was located within the Homeobox Telomere-Binding Protein 1 (HMBOX1) gene with a 195 g (95%CI: −241, −149 g) decrease in birthweight per 10% increase in methylation, while the top DMR was located within the promoter of corticotropin-releasing hormone-binding protein (CRHBP). …”
Publicado 2021
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100por Levayer, Manon Malia Sydney, Chew, Gem Rui Ping, Sheldrick, Kyle Alexander, Diwan, Ashish Dhar“…These p values were combined for each study into study-wise p values using the Stouffer method. Studies with p values below 0.01 and 0.05 and those above 0.95 and 0.99 were reviewed. …”
Publicado 2023
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