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101por Sikdar, Sinjini“…METHODS: In this article, we discuss how application of standard theoretical null distributional assumptions of the classical meta-analysis methods, such as Fisher’s p-value combination and Stouffer’s Z, can lead to incorrect significant testing results, and we propose a robust meta-analysis method that empirically modifies the individual test statistics and p-values before combining them. …”
Publicado 2022
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102por Antoun, Elie, Garratt, Emma S., Taddei, Andrea, Burton, Mark A., Barton, Sheila J., Titcombe, Phil, Westbury, Leo D., Baczynska, Alicia, Migliavacca, Eugenia, Feige, Jerome N., Sydall, Holly E., Dennison, Elaine, Dodds, Richard, Roberts, Helen C., Richardson, Peter, Sayer, Avan A., Shaw, Sarah, Cooper, Cyrus, Holbrook, Joanna D., Patel, Harnish P., Godfrey, Keith M., Lillycrop, Karen A.“…RESULTS: Sarcopenia was associated with differential methylation at 176 dmCpGs (false discovery rate ≤ 0.05) and 141 differentially methylated regions (Stouffer ≤ 0.05). The sarcopenia‐associated dmCpGs were enriched in genes associated with myotube fusion (P = 1.40E‐03), oxidative phosphorylation (P = 2.78E‐02), and voltage‐gated calcium channels (P = 1.59E‐04). …”
Publicado 2021
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103por Luo, Qi, Dwaraka, Varun B., Chen, Qingwen, Tong, Huige, Zhu, Tianyu, Seale, Kirsten, Raffaele, Joseph M., Zheng, Shijie C., Mendez, Tavis L., Chen, Yulu, Carreras, Natalia, Begum, Sofina, Mendez, Kevin, Voisin, Sarah, Eynon, Nir, Lasky-Su, Jessica A., Smith, Ryan, Teschendorff, Andrew E.“…Using this reference matrix, we perform a directional Stouffer and fixed effects meta-analysis comprising 23,053 blood samples from 22 different cohorts, to comprehensively map associations between the 12 immune-cell fractions and common phenotypes. …”
Publicado 2023
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104por Burton, Mark A., Garratt, Emma S., Hewitt, Matthew O., Sharkh, Hanan Y., Antoun, Elie, Westbury, Leo D., Dennison, Elaine M., Harvey, Nicholas C., Cooper, Cyrus, MacIsaac, Julia L., Kobor, Michael S., Patel, Harnish P., Godfrey, Keith M., Lillycrop, Karen A.“…The methylation signal associated with HOMA2-IR was attenuated after the addition of either BMI (6 dmCpGs), appendicular lean mass index (ALMi) (7 dmCpGs), grip strength (15 dmCpGs) or gait speed (23 dmCpGs) as covariates in the model. There were 8 DMRs (Stouffer < 0.05) associated with HOMA2-IR, including DMRs within T-box transcription factor (TBX1) and nuclear receptor subfamily-2 group F member-2 (NR2F2); the DMRs within TBX1 and NR2F2 remained associated with HOMA2-IR after adjustment for BMI, ALMi, grip strength or gait speed. …”
Publicado 2023
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105por Chen, Ming, Zhong, Pengqiang, Hong, Mengzhi, Tan, Jinfeng, Yu, Xuegao, Huang, Hao, Ouyang, Juan, Lin, Xiaoping, Chen, Peisong“…The copy number variants (CNVs) of whole genome were detected and the Stouffers Z-scores for each CNV was extracted. The risk of malignancy (RM) of each suspicious sample was calculated based on the CNV counts and Z-scores, which was subsequently compared with ovarian cancer markers CA125 and HE4, and the risk of ovarian malignancy algorithm (ROMA). …”
Publicado 2021
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