Metatranscriptomic insights on gene expression and regulatory controls in Candidatus Accumulibacter phosphatis

por Oyserman, Ben O, Noguera, Daniel R, del Rio, Tijana Glavina, Tringe, Susannah G, McMahon, Katherine D
Publicado 2016

High-resolution phylogenetic microbial community profiling

por Singer, Esther, Bushnell, Brian, Coleman-Derr, Devin, Bowman, Brett, Bowers, Robert M, Levy, Asaf, Gies, Esther A, Cheng, Jan-Fang, Copeland, Alex, Klenk, Hans-Peter, Hallam, Steven J, Hugenholtz, Philip, Tringe, Susannah G, Woyke, Tanja
Publicado 2016

The rhizosphere microbiome of burned holm-oak: potential role of the genus Arthrobacter in the recovery of burned soils

por Fernández-González, Antonio J., Martínez-Hidalgo, Pilar, Cobo-Díaz, José F., Villadas, Pablo J., Martínez-Molina, Eustoquio, Toro, Nicolás, Tringe, Susannah G., Fernández-López, Manuel
Publicado 2017

A compendium of multi-omic sequence information from the Saanich Inlet water column

por Hawley, Alyse K., Torres-Beltrán, Mónica, Zaikova, Elena, Walsh, David A., Mueller, Andreas, Scofield, Melanie, Kheirandish, Sam, Payne, Chris, Pakhomova, Larysa, Bhatia, Maya, Shevchuk, Olena, Gies, Esther A., Fairley, Diane, Malfatti, Stephanie A., Norbeck, Angela D., Brewer, Heather M., Pasa-Tolic, Ljiljana, del Rio, Tijana Glavina, Suttle, Curtis A., Tringe, Susannah, Hallam, Steven J.
Publicado 2017

Metabolomics of sorghum roots during nitrogen stress reveals compromised metabolic capacity for salicylic acid biosynthesis

por Sheflin, Amy M., Chiniquy, Dawn, Yuan, Chaohui, Goren, Emily, Kumar, Indrajit, Braud, Max, Brutnell, Thomas, Eveland, Andrea L., Tringe, Susannah, Liu, Peng, Kresovich, Stephen, Marsh, Ellen L., Schachtman, Daniel P., Prenni, Jessica E.
Publicado 2019

Microbial drivers of methane emissions from unrestored industrial salt ponds

por Zhou, Jinglie, Theroux, Susanna M., Bueno de Mesquita, Clifton P., Hartman, Wyatt H., Tian, Ye, Tringe, Susannah G.
Publicado 2021

Defining the Sphagnum Core Microbiome across the North American Continent Reveals a Central Role for Diazotrophic Methanotrophs in the Nitrogen and Carbon Cycles of Boreal Peatland...

por Kolton, Max, Weston, David J., Mayali, Xavier, Weber, Peter K., McFarlane, Karis J., Pett-Ridge, Jennifer, Somoza, Mark M., Lietard, Jory, Glass, Jennifer B., Lilleskov, Erik A., Shaw, A. Jonathan, Tringe, Susannah, Hanson, Paul J., Kostka, Joel E.
Publicado 2022

Real-time laser ultrasonic monitoring of laser-induced thermal processes

por Morales, Rosa E., Harke, Kathryn J., Tringe, Joseph W., Stobbe, David M., Murray, Todd W.
Publicado 2022

Highly diverse and unknown viruses may enhance Antarctic endoliths’ adaptability

por Ettinger, Cassandra L., Saunders, Morgan, Selbmann, Laura, Delgado-Baquerizo, Manuel, Donati, Claudio, Albanese, Davide, Roux, Simon, Tringe, Susannah, Pennacchio, Christa, del Rio, Tijana G., Stajich, Jason E., Coleine, Claudia
Publicado 2023

The Metagenome of an Anaerobic Microbial Community Decomposing Poplar Wood Chips

por van der Lelie, Daniel, Taghavi, Safiyh, McCorkle, Sean M., Li, Luen-Luen, Malfatti, Stephanie A., Monteleone, Denise, Donohoe, Bryon S., Ding, Shi-You, Adney, William S., Himmel, Michael E., Tringe, Susannah G.
Publicado 2012

The metagenome of the marine anammox bacterium ‘Candidatus Scalindua profunda’ illustrates the versatility of this globally important nitrogen cycle bacterium

por van de Vossenberg, Jack, Woebken, Dagmar, Maalcke, Wouter J, Wessels, Hans J C T, Dutilh, Bas E, Kartal, Boran, Janssen-Megens, Eva M, Roeselers, Guus, Yan, Jia, Speth, Daan, Gloerich, Jolein, Geerts, Wim, van der Biezen, Erwin, Pluk, Wendy, Francoijs, Kees-Jan, Russ, Lina, Lam, Phyllis, Malfatti, Stefanie A, Tringe, Susannah Green, Haaijer, Suzanne C M, Op den Camp, Huub J M, Stunnenberg, Henk G, Amann, Rudi, Kuypers, Marcel M M, Jetten, Mike S M
Publicado 2013

Impact of library preparation protocols and template quantity on the metagenomic reconstruction of a mock microbial community

por Bowers, Robert M., Clum, Alicia, Tice, Hope, Lim, Joanne, Singh, Kanwar, Ciobanu, Doina, Ngan, Chew Yee, Cheng, Jan-Fang, Tringe, Susannah G., Woyke, Tanja
Publicado 2015

Consortia of low-abundance bacteria drive sulfate reduction-dependent degradation of fermentation products in peat soil microcosms

por Hausmann, Bela, Knorr, Klaus-Holger, Schreck, Katharina, Tringe, Susannah G, Glavina del Rio, Tijana, Loy, Alexander, Pester, Michael
Publicado 2016

Proteogenomic analyses indicate bacterial methylotrophy and archaeal heterotrophy are prevalent below the grass root zone

por Butterfield, Cristina N., Li, Zhou, Andeer, Peter F., Spaulding, Susan, Thomas, Brian C., Singh, Andrea, Hettich, Robert L., Suttle, Kenwyn B., Probst, Alexander J., Tringe, Susannah G., Northen, Trent, Pan, Chongle, Banfield, Jillian F.
Publicado 2016

Contrasting patterns of genome-level diversity across distinct co-occurring bacterial populations

por Garcia, Sarahi L., Stevens, Sarah L. R., Crary, Benjamin, Martinez-Garcia, Manuel, Stepanauskas, Ramunas, Woyke, Tanja, Tringe, Susannah G., Andersson, Siv G. E., Bertilsson, Stefan, Malmstrom, Rex R., McMahon, Katherine D.
Publicado 2017

Peatland Acidobacteria with a dissimilatory sulfur metabolism

por Hausmann, Bela, Pelikan, Claus, Herbold, Craig W., Köstlbacher, Stephan, Albertsen, Mads, Eichorst, Stephanie A., Glavina del Rio, Tijana, Huemer, Martin, Nielsen, Per H., Rattei, Thomas, Stingl, Ulrich, Tringe, Susannah G., Trojan, Daniela, Wentrup, Cecilia, Woebken, Dagmar, Pester, Michael, Loy, Alexander
Publicado 2018

Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea

por Bowers, Robert M, Kyrpides, Nikos C, Stepanauskas, Ramunas, Harmon-Smith, Miranda, Doud, Devin, Reddy, T B K, Schulz, Frederik, Jarett, Jessica, Rivers, Adam R, Eloe-Fadrosh, Emiley A, Tringe, Susannah G, Ivanova, Natalia N, Copeland, Alex, Clum, Alicia, Becraft, Eric D, Malmstrom, Rex R, Birren, Bruce, Podar, Mircea, Bork, Peer, Weinstock, George M, Garrity, George M, Dodsworth, Jeremy A, Yooseph, Shibu, Sutton, Granger, Glöckner, Frank O, Gilbert, Jack A, Nelson, William C, Hallam, Steven J, Jungbluth, Sean P, Ettema, Thijs J G, Tighe, Scott, Konstantinidis, Konstantinos T, Liu, Wen-Tso, Baker, Brett J, Rattei, Thomas, Eisen, Jonathan A, Hedlund, Brian, McMahon, Katherine D, Fierer, Noah, Knight, Rob, Finn, Rob, Cochrane, Guy, Karsch-Mizrachi, Ilene, Tyson, Gene W, Rinke, Christian, Lapidus, Alla, Meyer, Folker, Yilmaz, Pelin, Parks, Donovan H, Murat Eren, A, Schriml, Lynn, Banfield, Jillian F, Hugenholtz, Philip, Woyke, Tanja
Publicado 2017

Minimum Information about an Uncultivated Virus Genome (MIUViG)

por Roux, Simon, Adriaenssens, Evelien M, Dutilh, Bas E, Koonin, Eugene V, Kropinski, Andrew M, Krupovic, Mart, Kuhn, Jens H, Lavigne, Rob, Brister, J Rodney, Varsani, Arvind, Amid, Clara, Aziz, Ramy K, Bordenstein, Seth R, Bork, Peer, Breitbart, Mya, Cochrane, Guy R, Daly, Rebecca A, Desnues, Christelle, Duhaime, Melissa B, Emerson, Joanne B, Enault, François, Fuhrman, Jed A, Hingamp, Pascal, Hugenholtz, Philip, Hurwitz, Bonnie L, Ivanova, Natalia N, Labonté, Jessica M, Lee, Kyung-Bum, Malmstrom, Rex R, Martinez-Garcia, Manuel, Mizrachi, Ilene Karsch, Ogata, Hiroyuki, Páez-Espino, David, Petit, Marie-Agnès, Putonti, Catherine, Rattei, Thomas, Reyes, Alejandro, Rodriguez-Valera, Francisco, Rosario, Karyna, Schriml, Lynn, Schulz, Frederik, Steward, Grieg F, Sullivan, Matthew B, Sunagawa, Shinichi, Suttle, Curtis A, Temperton, Ben, Tringe, Susannah G, Thurber, Rebecca Vega, Webster, Nicole S, Whiteson, Katrine L, Wilhelm, Steven W, Wommack, K Eric, Woyke, Tanja, Wrighton, Kelly C, Yilmaz, Pelin, Yoshida, Takashi, Young, Mark J, Yutin, Natalya, Allen, Lisa Zeigler, Kyrpides, Nikos C, Eloe-Fadrosh, Emiley A
Publicado 2018

A genomic catalog of Earth’s microbiomes

por Nayfach, Stephen, Roux, Simon, Seshadri, Rekha, Udwary, Daniel, Varghese, Neha, Schulz, Frederik, Wu, Dongying, Paez-Espino, David, Chen, I-Min, Huntemann, Marcel, Palaniappan, Krishna, Ladau, Joshua, Mukherjee, Supratim, Reddy, T. B. K., Nielsen, Torben, Kirton, Edward, Faria, José P., Edirisinghe, Janaka N., Henry, Christopher S., Jungbluth, Sean P., Chivian, Dylan, Dehal, Paramvir, Wood-Charlson, Elisha M., Arkin, Adam P., Tringe, Susannah G., Visel, Axel, Woyke, Tanja, Mouncey, Nigel J., Ivanova, Natalia N., Kyrpides, Nikos C., Eloe-Fadrosh, Emiley A.
Publicado 2020

The biogeographic differentiation of algal microbiomes in the upper ocean from pole to pole

por Martin, Kara, Schmidt, Katrin, Toseland, Andrew, Boulton, Chris A., Barry, Kerrie, Beszteri, Bánk, Brussaard, Corina P. D., Clum, Alicia, Daum, Chris G., Eloe-Fadrosh, Emiley, Fong, Allison, Foster, Brian, Foster, Bryce, Ginzburg, Michael, Huntemann, Marcel, Ivanova, Natalia N., Kyrpides, Nikos C., Lindquist, Erika, Mukherjee, Supratim, Palaniappan, Krishnaveni, Reddy, T. B. K., Rizkallah, Mariam R., Roux, Simon, Timmermans, Klaas, Tringe, Susannah G., van de Poll, Willem H., Varghese, Neha, Valentin, Klaus U., Lenton, Timothy M., Grigoriev, Igor V., Leggett, Richard M., Moulton, Vincent, Mock, Thomas
Publicado 2021