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421por Ofili, Elizabeth O., Sarpong, Daniel, Yanagihara, Richard, Tchounwou, Paul B., Fernández-Repollet, Emma, Malouhi, Mohamad, Idris, Muhammed Y., Lawson, Kimberly, Spring, Nadine H., Rivers, Brian M.“…At its core, the RCMI Program embodies the trinity of diversity, equity, and inclusion. We propose a realist evaluation framework and a logic model that integrates the institutional context to develop common data metrics for inclusive excellence. …”
Publicado 2021
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422“…A new tuberculosis (TB) treatment service model called “trinity model” has been adopted in China since 2010 but the implementation coverage is still unknown. …”
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423por Jacksch, Susanne, König, Christoph, Kaiser, Dominik, Weide, Mirko, Ratering, Stefan, Schnell, Sylvia, Egert, Markus“…The final assemblies included 22,321 Trinity isoforms and 12,600 Spades isoforms. A large part of these isoforms could be assigned to the SwissProt database, and was further categorized into “molecular function”, “biological process” and “cellular component” using Gene Ontology (GO) terms. …”
Publicado 2021
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424“…“Balanced Harmony” is the ideal pursuit of Harmony, “External Harmony” and “Internal Harmony” are the two basic contents of Harmony, the trinity of which constitute a systematic concept of valuing “Harmony.” …”
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425“…Arable land protection is critical to the sustainable development of agriculture in China and acceleration of the realization of the trinity protection goal of the quantity, quality, and ecology of arable land. …”
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426por Dry, Sarah“…Most of these writings, on subjects ranging from secret alchemical formulas to impassioned rejections of the Holy Trinity to notes and calculations on his core discoveries in calculus, universal gravitation, and optics, were summarily dismissed by his heirs as "not fit to be printed." …”
Publicado 2014
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427“…Next-generation sequencing (NGS) shows potential to investigate the venom complexity, giving deeper insights into snakebite pathogenesis and possible drug discoveries. mRNA from venom gland tissue was extracted and sequenced on the Illumina HiSeq platform and de novo assembled by Trinity. The candidate toxin genes were identified via the Venomix pipeline. …”
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428“…Among the assemblies generated by combining various assemblers, Trinity and IDBA-Tran yielded good assembly with higher mapping rates and percentages of BLAST hit contigs and complete BUSCO. …”
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429por Habibi, Nazima, Uddin, Saif, Behebehani, Montaha, Khan, Mohd Wasif, Razzack, Nasreem Abdul, Shirshikhar, Faiz“…The raw sequences were assembled through Trinity 2.6.6 and mined for single nucleotide polymorphisms (SNPs) and simple sequence repeats (SSRs). …”
Publicado 2023
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430por Li, Huai-Zhu, Gao, Xiang, Li, Xiao-Yan, Chen, Qi-Jiao, Dong, Jian, Zhao, Wan-Chun“…The most successful approach was to filter the reads with Q30 prior to de novo assembly using Trinity, merge the assembled contigs with genes available in wheat cDNA reference data sets, and combine the resulting assembly with an assembly from a reference-based strategy. …”
Publicado 2013
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431“…For a better understanding of the molecular mechanisms driving neuronal development, and to characterize the entire leech Hirudo medicinalis central nervous system (CNS) transcriptome we combined Trinity for de-novo assembly and Illumina HiSeq2000 for RNA-Seq. …”
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432por Darris, Carl E, Tyus, James E, Kelley, Gary, Ropelewski, Alexander J, Nicholas, Hugh B, Wang, Xiaofei, Nahashon, Samuel“…RESULTS: 74 million sequences were generated and assembled into 96,492 contigs using the Trinity software suite. Over 39,000 of these transcripts were found to have in silico translated protein sequences that are homologous to chicken protein sequences. …”
Publicado 2015
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433por Wang, Ying, Ding, Jia-tong, Yang, Hai-ming, Yan, Zheng-jie, Cao, Wei, Li, Yang-bai“…A total of 157,774 unigenes (mean length: 790 bp) were obtained by the Trinity program, and 35.83% of these unigenes were matched to genes in a non-redundant protein database. …”
Publicado 2015
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434por Zhukov, Vladimir A., Zhernakov, Alexander I., Kulaeva, Olga A., Ershov, Nikita I., Borisov, Alexey Y., Tikhonovich, Igor A.“…In this study, we performed RNA sequencing of polyadenylated transcripts from young pea nodules and root tips on an Illumina GAIIx system, followed by de novo transcriptome assembly using the Trinity program. We obtained more than 58,000 and 37,000 contigs from “Nodules” and “Root Tips” assemblies, respectively. …”
Publicado 2015
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435por Franta, Zdeněk, Vogel, Heiko, Lehmann, Rüdiger, Rupp, Oliver, Goesmann, Alexander, Vilcinskas, Andreas“…As a result we obtained more than 123.8 million paired-end reads, which were assembled de novo using Trinity and Oases assemblers, yielding 41,421 contigs with an N50 contig length of 2.22 kb and a total length of 67.79 Mb. …”
Publicado 2016
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436por Gaur, Mahendra, Das, Aradhana, Sahoo, Rajesh Kumar, Mohanty, Sujata, Joshi, Raj Kumar, Subudhi, Enketeswara“…We identified 60,452 and 54,748 transcripts using trinity tool respectively from ginger rhizome of S1Z4 and S2Z5. …”
Publicado 2016
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437por Wang, Yi, Wang, Chao, Wang, Xiaolu, Peng, Fan, Wang, Ruijiao, Jiang, Yulin, Zeng, Jian, Fan, Xing, Kang, Houyang, Sha, Lina, Zhang, Haiqin, Xiao, Xue, Zhou, Yonghong“…In this study, a transcriptome, including 76,014 unigenes, was assembled from dwarf polish wheat (DPW) roots, stems, and leaves using the software of Trinity. Among these unigenes, 61,748 (81.23%) unigenes were functionally annotated in public databases and classified into differentially functional types. …”
Publicado 2016
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438“…The first nuclear bomb detonation on Earth involved a plutonium implosion-type device exploded at the Trinity test site (33°40′38.28″N, 106°28′31.44″W), White Sands Proving Grounds, near Alamogordo, New Mexico. …”
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439por Khosa, Jiffinvir S., Lee, Robyn, Bräuning, Sophia, Lord, Janice, Pither-Joyce, Meeghan, McCallum, John, Macknight, Richard C.“…A total of 396 million 100 base pair paired reads was assembled using the Trinity pipeline, resulting in 271,665 transcript contigs. …”
Publicado 2016
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440por Beletsky, Alexey V., Filyushin, Mikhail A., Gruzdev, Eugeny V., Mazur, Alexander M., Prokhortchouk, Egor B., Kochieva, Elena Z., Mardanov, Andrey V., Ravin, Nikolai V., Skryabin, Konstantin G.“…A total of 103,025,683 reads were filtered after removing low-quality reads and trimming the adapter sequences. The Trinity program was used to de novo assemble 98,349 unigens with an N50 of 1342 bp. …”
Publicado 2016
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