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681por Park, Chang Ha, Yeo, Hyeon Ji, Park, Ye Eun, Baek, Seung-A, Kim, Jae Kwang, Park, Sang Un“…The results of studies conducted in duplicate revealed the presence of a total of 325,609 and 404,019 unigenes, acquired from 9,913,869,968 and 10,162,653,038 raw reads, respectively, after trimming the raw reads using CutAdapt, assembly using Trinity package, and clustering using CD-Hit-EST. …”
Publicado 2019
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682“…In South Africa there are no specific public healthcare services tailored to the needs of these communities, particularly if they are immigrants. Trinity Health Services is a student-run inner-city clinic providing free healthcare to the homeless of Johannesburg, South Africa. …”
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683por Cobos, Marianela, Rodríguez, Hicler N., Estela, Segundo L., Castro, Carlos G., Maddox, J. Dylan, Paredes, Jae D., Saldaña, Juan R., Tresierra, Álvaro B., Castro, Juan C.“…Transcriptomes were de novo assembled using Trinity v2.9.1. A total of 48,554 transcripts (range from 250 to 7966 bp; N50 = 1047) for Ankistrodesmus sp., 108,126 transcripts (range from 250 to 8160 bp; N50 = 1090) for Chlorella sp., and 77,689 transcripts (range from 250 to 8481 bp; N50 = 1281) for Scenedesmus sp. were de novo assembled. …”
Publicado 2020
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684“…METHODS: This was a retrospective cohort study including confirmed COVID-19 patients admitted to the four Trinity Health of New England hospitals (THONE) in Connecticut and Massachusetts who either died or were discharged between March 1–April 22, 2020. …”
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685por Neuparth, Teresa, Machado, André M., Montes, Rosa, Rodil, Rosario, Barros, Susana, Alves, Nélson, Ruivo, Raquel, Castro, Luis Filipe C., Quintana, José B., Santos, Miguel M.“…Briefly, Illumina HiSeq™ 2500 platform was used to perform RNA sequencing, and due to the unavailability of G. locusta genome, the RNA-seq datasets were assembled de novo using Trinity and annotated with Trinotate software. After assembly and post-processing steps, 106093 transcripts with N50 of 2371 bp and mean sequence length of 1343.98 bp was produced. …”
Publicado 2020
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686por Porter, Kirsty M, Hoey, Leane, Hughes, Catherine F, Ward, Mary, Clements, Michelle, Strain, Jj, Cunningham, Conal, Casey, Miriam C, Tracey, Fergal, O'Kane, Maurice, Pentieva, Kristina, McAnena, Liadhan, McCarroll, Kevin, Laird, Eamon, Molloy, Anne M, McNulty, Helene“…METHODS: Eligible participants (n = 3299) not using vitamin B-12 supplements were drawn from the Trinity-Ulster and Department of Agriculture cohort, a study of noninstitutionalized adults aged ≥60 y and recruited in 2008–2012. …”
Publicado 2021
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687por Hu, Qi, Gao, Mingyue, Zhang, Du, Leng, Bingfeng, Wang, Junwen, Liu, Qian, He, Shuangyan, Zhi, Wenling, Zhou, Zhijun“…The present study used RNA-sequencing (RNA-seq) technology to establish a de novo assembly of the M. fortis transcriptome produced 339,830 unigenes by the short reads assembly program Trinity. Comparisons were made between OVC and healthy ovarian tissue (OV) and between fallopian tube cancer (FTC) and healthy fallopian tube (FT) tissues using RNA-seq analysis. …”
Publicado 2022
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688por Dyer, Adam H., Laird, Eamon, Hoey, Leane, Hughes, Catherine F., McNulty, Helene, Ward, Mary, Strain, J. J., O’Kane, Maurice, Tracey, Fergal, Molloy, Anne M., Cunningham, Conal, Sexton, Donal J., McCarroll, Kevin“…METHODS: Participants aged >60 years from the Trinity‐Ulster‐Department of Agriculture study underwent detailed cognitive assessment using the Mini‐Mental State Examination (Mini‐Mental State Examination (MMSE)), Frontal Assessment Battery (FAB) and Repeatable Battery for Assessment of Neuropsychological Status (RBANS). …”
Publicado 2022
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689por Low, Ernest Z., O’Sullivan, Niall J., Sharma, Vidushi, Sebastian, Isabella, Meagher, Roisin, Alomairi, Dalal, Alhouti, Ebraheem H., Donohoe, Claire L., Kelly, Michael E.“…METHODS: Cross-sectional survey of medical students at Trinity College Dublin (TCD) between March and April 2022 was performed. …”
Publicado 2022
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690por Weston, Eleanor, Pangilinan, Faith, Eaton, Simon, Orford, Michael, Leung, Kit-Yi, Copp, Andrew J, Mills, James L, Molloy, Anne M, Brody, Lawrence C, Greene, Nicholas D E“…METHODS: GC-MS was used to determine plasma MI concentration of >2000 healthy, young adults (aged 18–28 y) from the Trinity Student Study. Genotyping data were used to test association of plasma MI with single nucleotide polymorphisms (SNPs) in candidate genes, encoding inositol transporters and synthesizing enzymes, and test for genome-wide association. …”
Publicado 2022
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691por Shaver, Peter“…He covers an immense range, offering a splendid overview of the intricate processes that connect us to the universe, and which allowed complex life to emerge from simple beginnings" – Martin Rees, Master of Trinity College, Cambridge and Astronomer Royal. “Where did the universe come from? …”
Publicado 2011
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692por Förster, Katharina, Grotegerd, Dominik, Dohm, Katharina, Lemke, Hannah, Enneking, Verena, Meinert, Susanne, Redlich, Ronny, Heindel, Walter, Bauer, Jochen, Kugel, Harald, Suslow, Thomas, Ohrmann, Patricia, Carballedo, Angela, O’Keane, Veronica, Fagan, Andrew, Doolin, Kelly, McCarthy, Hazel, Kanske, Philipp, Frodl, Thomas, Dannlowski, Udo“…We investigated PAD (N = 38) and healthy controls (N = 37) at two sites (University of Münster, Germany, Trinity College Dublin, Ireland). PAD were divided into two groups based on the experience of in-patient psychiatric treatment during follow-up. …”
Publicado 2023
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693por Angelino, Donato, Caffrey, Aoife, McNulty, Helene, Gill, Chris IR., Mena, Pedro, Rosi, Alice, Moore, Katie, Hoey, Leane, Clements, Michelle, Laird, Eamon, Boyd, Kerrie, Mullen, Brian, Pucci, Bruna, Jarrett, Harry, Cunningham, Conal, Ward, Mary, Strain, J.J., McCarroll, Kevin, Moore, Adrian J., Molloy, Anne M., Del Rio, Daniele“…DESIGN: We measured 9 PVLs by uHPLC-MS-MS in plasma from adults (>60y) in the Trinity-Ulster-Department of Agriculture (TUDA study (2008 to 2012; n=5186) and a follow-up subset (2014 to 2018) with corresponding dietary data (n=557). …”
Publicado 2023
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694“…METHODS: This retrospective, multicenter, cohort study included adult female patients treated at Trinity Health Michigan ambulatory sites who received cephalexin for symptomatic uUTI with cefazolin-susceptible urine cultures between February 1, 2020, and August 31, 2022. …”
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695por Kobayashi, Genki“…Assembly was performed with a recently published pipeline mitoRNA, which includes cycles of Bowtie2 mapping and Trinity assembly. Assembled mPCGs were deposited in GenBank as Third Party Data (TPA) data. …”
Publicado 2023
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696por Chen, Jinhuan, Tian, Qianqian, Pang, Tao, Jiang, Libo, Wu, Rongling, Xia, Xinli, Yin, Weilun“…To understand the gene network controlling low temperature perception in P. euphratica, we performed transcriptome sequencing using Solexa sequence analysis to generate a leaf transcriptome at a depth of 10 gigabases for each sample. RESULTS: Using the Trinity method, 52,081,238 high-quality trimmed reads were assembled into a non-redundant set and 108,502 unigenes with an average length of 1,047 bp were generated. …”
Publicado 2014
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697“…RESULTS: Using transcriptome sequencing, Trinity RNA-seq assemblies and extensive manual curation, we identified a total of 91 candidate chemosensory receptors (60 candidate ORs, 10 GRs and 21 IRs). …”
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698por Chauhan, Pallavi, Hansson, Bengt, Kraaijeveld, Ken, de Knijff, Peter, Svensson, Erik I, Wellenreuther, Maren“…RESULTS: Illumina RNA sequencing performed on tissues from the head, thorax and abdomen generated 428,744,100 paired-ends reads amounting to 110 Gb of sequence data, which was assembled de novo with Trinity. A transcriptome was produced after filtering and quality checking yielding a final set of 60,232 high quality transcripts for analysis. …”
Publicado 2014
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699por Leung, Priscilla TY, Ip, Jack CH, Mak, Sarah ST, Qiu, Jian Wen, Lam, Paul KS, Wong, Chris KC, Chan, Leo L, Leung, Kenneth MY“…After de novo assembly using Trinity, 233,257 contigs were generated with an average length of 1,264 bp and an N50 length of 2,868 bp; 192,879 assembled transcripts and 150,111 assembled unigenes were obtained after clustering. …”
Publicado 2014
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700por Niu, Jun, An, Jiyong, Wang, Libing, Fang, Chengliang, Ha, Denglong, Fu, Chengyu, Qiu, Lin, Yu, Haiyan, Zhao, Haiyan, Hou, Xinyu, Xiang, Zheng, Zhou, Sufan, Zhang, Zhixiang, Feng, Xinyi, Lin, Shanzhi“…By Illumina/Solexa sequencings, approximately 65 million short reads (average length = 96 bp) were obtained, and then assembled into 124,070 unigenes by Trinity strategy (mean size = 829.62 bp). A total of 3,000, 2,781, 2,620, and 2,675 differentially expressed unigenes were identified at 30, 50, 60, and 70 DAF (10 DAF as the control) by DESeq method, respectively. …”
Publicado 2015
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