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221por Li, Ruidong, Qu, Han, Wang, Shibo, Chater, John M, Wang, Xuesong, Cui, Yanru, Yu, Lei, Zhou, Rui, Jia, Qiong, Traband, Ryan, Wang, Meiyue, Xie, Weibo, Yuan, Dongbo, Zhu, Jianguo, Zhong, Wei-De, Jia, Zhenyu“…The CancerMIRNome database is publicly available at http://bioinfo.jialab-ucr.org/CancerMIRNome.…”
Publicado 2021
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222por Guzman, Carlos R., Young, Stephanie, Rabedeaux, Paul, Lerner, Seth D., Wimmers, Paul F., Byus, Craig, Wisco, Jonathan J.“…We conducted three annual surveys of students of the David Geffen School of Medicine (DGSOM) at the University of California Los Angeles (UCLA) and students of the University of California, Riverside (UCR)/UCLA Thomas Haider Program in Biomedical Sciences from 2010 to 2012. …”
Publicado 2015
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223“…A series of experiments on the UCR dataset verifies the effectiveness and superiority of the model. …”
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224por Yu, Ting-Xi, Kalakonda, Sudhakar, Liu, Xiangzheng, Han, Naomi, Chung, Hee K., Xiao, Lan, Rao, Jaladanki N., He, Tong-Chuan, Raufman, Jean-Pierre, Wang, Jian-Ying“…Here, we investigated the role of T-UCRs in intestinal epithelial homeostasis and identified T-UCR uc.230 as a major regulator of epithelial renewal, apoptosis, and barrier function. …”
Publicado 2022
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225por Miyazaki, Satoshi, Hamada, Toshihiro, Isoyama, Tadahiro, Okada, Shinichi, Tomita, Katsuyuki, Endo, Yusuke, Kuwabara, Masanari, Sugihara, Shinobu, Ogino, Kazuhide, Ninomiya, Haruaki, Ichida, Kimiyoshi, Yamamoto, Kazuhiro, Takenaka, Atsushi, Hisatome, Ichiro“…RESULTS: The SUA level of RHU was 0.9±0.5/mg/dL, and the Uur/Ucr and Cur/Ccr were 0.56±0.14% and 45.7±18.0%, respectively. …”
Publicado 2022
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226“…The online services provide access to the generated clustering results and ultra-fast similarity searching of the PubChem Compound database with subsecond response time. Contact: thomas.girke@ucr.edu Supplementary information: Supplementary data are available at Bioinformatics online.…”
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227“…Availability and implementation: The AlignGraph software can be downloaded for free from this site: https://github.com/baoe/AlignGraph. Contact: thomas.girke@ucr.edu…”
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228“…Because triple mutants were lethal under our growth conditions, we exploited a strategy of transformation of single and double mutants with RNAi constructs that contained sequences from the unconserved sigma region (UCR). These RNAi/knockout lines phenotypically resembled their parental lines, but were even more strongly affected in their plastid transcript patterns. …”
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229“…The source code of ISP is freely available at http://alumni.cs.ucr.edu/~liw/isp.html.…”
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230por Kajita, K, Kuwano, Y, Satake, Y, Kano, S, Kurokawa, K, Akaike, Y, Masuda, K, Nishida, K, Rokutan, K“…Ultraconserved regions (UCRs) are >200 bp genomic segments with perfect human-to-rodent sequence identity. …”
Publicado 2016
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231por Papale, Massimo, Vocino, Grazia, Lucarelli, Giuseppe, Rutigliano, Monica, Gigante, Margherita, Rocchetti, Maria Teresa, Pesce, Francesco, Sanguedolce, Francesca, Bufo, Pantaleo, Battaglia, Michele, Stallone, Giovanni, Grandaliano, Giuseppe, Carrieri, Giuseppe, Gesualdo, Loreto, Ranieri, Elena“…Baseline urinary RKIP, evaluated in an independent cohort of 56 ccRCC patients and 28 HS, successfully distinguished both groups and, most importantly, a cut-off value of 10 ng/mg/g Pr/uCr enabled a highly accurate prediction of Cancer-specific survival and Progression-free survival. …”
Publicado 2017
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232por Sekino, Yohei, Sakamoto, Naoya, Goto, Keisuke, Honma, Ririno, Shigematsu, Yoshinori, Sentani, Kazuhiro, Oue, Naohide, Teishima, Jun, Matsubara, Akio, Yasui, Wataru“…In this study, we investigated the transcriptional levels of 26 representative T-UCRs and determined the regions that were differentially expressed in PC. …”
Publicado 2017
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233por Braicu, Cornelia, Zimta, Alina-Andreea, Harangus, Antonia, Iurca, Ioana, Irimie, Alexandru, Coza, Ovidiu, Berindan-Neagoe, Ioana“…Through our review of studies on this subject, we identify the following non-coding RNAs as tumor suppressors: ts-46, ts-47, ts-101, ts-53, ts-3676, ts-4521 (tRNA fragments), SNORD116-26, HBII-420, SNORD15A, SNORA42 (snoRNAs), piRNA-like-163, piR-35127, the piR-46545 (piRNAs), CHIAP2, LOC100420907, RPL13AP17 (pseudogenes), and uc.454 (T-UCR). We also found non-coding RNAs with tumor-promoting function: tRF-Leu-CAG, tRNA-Leu, tRNA-Val (tRNA fragments), circ-RAD23B, circRNA 100146, circPVT1, circFGFR3, circ_0004015, circPUM1, circFLI1, circABCB10, circHIPK3 (circRNAs), SNORA42, SNORA3, SNORD46, SNORA21, SNORD28, SNORA47, SNORD66, SNORA68, SNORA78 (snoRNAs), piR-65, piR-34871, piR-52200, piR651 (piRNAs), hY4 5’ fragments (YRNAs), FAM83A-AS1, WRAP53, NKX2-1-AS1 (NATs), DUXAP8, SFTA1P (pseudogene transcripts), uc.338, uc.339 (T-UCRs), and hTERC.…”
Publicado 2019
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234por Fasoli, Sabrina, Andreani, Giulia, Dondi, Francesco, Ferlizza, Enea, Bellei, Elisa, Isani, Gloria“…The urine specific gravity (USG), urine total proteins (uTP), urine creatinine (uCr), and urine protein:creatinine ratio (UPC) reference values, reported as the median, and lower limit (LL) and upper limit (UL), were 1.030 (1006–1.049), 17.58 (4.54–35.31) mg/dL, 154.62 (39.59–357.95) mg/dL, and 0.11 (0.07–0.16), respectively. …”
Publicado 2020
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235“…Ultraconserved regions (UCRs) are 481 genomic sequences with 100% identity across humans, rats, and mice. …”
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236por Wisco, Jonathan J., Young, Stephanie, Rabedeaux, Paul, Lerner, Seth D., Wimmers, Paul F., Byus, Craig, Guzman, Carlos R.“…A series of three annual surveys of David Geffen School of Medicine (DGSOM) at UCLA students and UCR/UCLA Thomas Haider Program in Biomedical Sciences students were administered from 2010 to 2012 to ascertain student perceptions of which anatomy pedagogy—prosection or dissection—was most valuable to them during the first year of preclinical medical education and for the entire medical school experience in general. …”
Publicado 2015
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237por Mishra, Sashikala, Shaw, Kailash, Mishra, Debahuti, Patil, Shruti, Kotecha, Ketan, Kumar, Satish, Bajaj, Simi“…The model is trained and tested over datasets from UCI, UEA, and UCR repositories as well which also have shown reduction in the error rates.…”
Publicado 2022
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238“…We used the univariate Cox regression (UCR) to select prediction lncRNAs that are related to necroptosis. …”
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239“…We perform ablation study to provide the empirical evidence of our claim and we show that proposed ShapAAL method consistently outperforms the current baselines and state-of-the-art algorithms for time series sensor data classification tasks from publicly available UCR time series archive that includes different practical important problems like detection of CVDs from ECG data.…”
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240“…Further, protein and genomic features suggest functional differences between subclasses of PIWI proteins and provide a basis for future analyses. Common UCR elements among SRRP components indicate that 1) key components from the miRNA, siRNA, and piRNA pathways contain NF-kappaB-related and Broad complex transcription factor binding sites, 2) purifying selection has occurred to maintain common pathway-specific elements across mosquito species and 3) species-specific differences in upstream elements suggest that there may be differences in regulatory control among mosquito species. …”
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