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Mostrando 441 - 460 Resultados de 591 Para Buscar '"Unix"', tiempo de consulta: 0.12s Limitar resultados
  1. 441
    “…DistMap is easy to use, currently supports nine different short read mapping tools and can be run on all Unix-based operating systems. It accepts reads in FASTQ format as input and provides mapped reads in a SAM/BAM format. …”
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    DistMap: A Toolkit for Distributed Short Read Mapping on a Hadoop Cluster
  2. 442
    por Marshall, Owen J., Brand, Andrea H.
    Publicado 2015
    “…The damidseq_pipeline is implemented in Perl and is compatible with any Unix-based operating system (e.g. Linux, Mac OSX). …”
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    damidseq_pipeline: an automated pipeline for processing DamID sequencing datasets
  3. 443
    por de Almeida, João M.G.C.F.
    Publicado 2010
    “…This procedure is usually confined to the realm of customized Perl scripts, usually tuned for UNIX-like environments. Porting those scripts to other operating systems involves refactoring them, and also the installation of the Perl programming environment with the required libraries. …”
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    BiDiBlast: Comparative Genomics Pipeline for the PC
  4. 444
    “…The Pse-Analysis Python package is freely accessible to the public at http://bioinformatics.hitsz.edu.cn/Pse-Analysis/, and can be directly run on Windows, Linux, and Unix.…”
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    Pse-Analysis: a python package for DNA/RNA and protein/peptide sequence analysis based on pseudo components and kernel methods
  5. 445
    por Beraldi, Dario
    Publicado 2017
    “…By following the same philosophy of UNIX tools, ASCIIGenome aims to be easily integrated with the command line, including batch processing of data, and therefore enables an effective exploration of the data. …”
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    ASCIIGenome: a command line genome browser for console terminals
  6. 446
    “…AVAILABILITY AND IMPLEMENTATION: MD-TASK has been open-sourced and is available for download from https://github.com/RUBi-ZA/MD-TASK, implemented in Python and supported on Linux/Unix.…”
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    MD-TASK: a software suite for analyzing molecular dynamics trajectories
  7. 447
    “…PyIOmica has been tested on Mac OS X, Unix/Linux and Microsoft Windows. The application is distributed under an MIT license. …”
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    PyIOmica: longitudinal omics analysis and trend identification
  8. 448
    por Klötzl, Fabian, Haubold, Bernhard
    Publicado 2020
    “…AVAILABILITY AND IMPLEMENTATION: Phylonium runs under the UNIX command line; its C++ sources and documentation are available from github.com/evolbioinf/phylonium. …”
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    Phylonium: fast estimation of evolutionary distances from large samples of similar genomes
  9. 449
    “…The acquired data can be sent to the cloud in real-time or stored in a micro SD memory in separate files (per sensor) to facilitate its reading, each data is time-stamped using Unix format, synchronized with a Network Time Protocol (NTP) server. …”
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    Modular system for UV–vis-NIR radiation measurement with wireless communication
  10. 450
    “…AVAILABILITY AND IMPLEMENTATION: Software available at https://gitlab.com/togop/3DPolyS-LE; implemented in Python and Fortran 2003 and supported on any Unix-based operating system (Linux and Mac OS). SUPPLEMENTARY INFORMATION: Supplementary information are available at Bioinformatics online.…”
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    3DPolyS-LE: an accessible simulation framework to model the interplay between chromatin and loop extrusion
  11. 451
    por Smith, Jason Alexander
    Publicado 2012
    “…Department of Energy) to centrally manage all staff Linux and UNIX desktops; in doing so, we've extended several core Puppet modules to not only support both RHEL 5 and 6, but also to include support for other operating systems, including Fedora, Gentoo, OS X, and Ubuntu.…”
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    Centralized Fabric Management Using Puppet, Git, and GLPI
  12. 452
    por Larralde, Martin, Zeller, Georg
    Publicado 2023
    “…AVAILABILITY AND IMPLEMENTATION: PyHMMER supports all modern Python versions (Python 3.6+) and similar platforms as HMMER (x86 or PowerPC UNIX systems). Pre-compiled packages are released via PyPI (https://pypi.org/project/pyhmmer/) and Bioconda (https://anaconda.org/bioconda/pyhmmer). …”
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    PyHMMER: a Python library binding to HMMER for efficient sequence analysis
  13. 453
    “…Downloadable versions for UNIX/LINUX and WINDOWS which permit the consideration of longer and more numerous sequences are also available.…”
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    Tools for the identification of variable and potentially variable tandem repeats
  14. 454
    por Nelson, William, Soderlund, Carol
    Publicado 2009
    “…FPC also supports high-throughput fingerprint map generation as its time-intensive functions have been parallelized for Unix-based desktops or servers with multiple CPUs. …”
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    Integrating sequence with FPC fingerprint maps
  15. 455
    por Reuter, Jessica S, Mathews, David H
    Publicado 2010
    “…This contribution describes new extensions to the package, including a library of C++ classes for incorporation into other programs, a user-friendly graphical user interface written in JAVA, and new Unix-style text interfaces. The original graphical user interface for Microsoft Windows is still maintained. …”
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    RNAstructure: software for RNA secondary structure prediction and analysis
  16. 456
    “…Relevant statistics for each processing step can be summarized into multi-sheet Excel documents and queryable SQL databases. MOCAT runs on UNIX machines and integrates seamlessly with the SGE and PBS queuing systems, commonly used to process large datasets. …”
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    MOCAT: A Metagenomics Assembly and Gene Prediction Toolkit
  17. 457
    “…Availability and Implementation: MOCAT2 is implemented in Perl 5 and Python 2.7, designed for 64-bit UNIX systems and offers support for high-performance computer usage via LSF, PBS or SGE queuing systems; source code is freely available under the GPL3 license at http://mocat.embl.de. …”
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    MOCAT2: a metagenomic assembly, annotation and profiling framework
  18. 458
    “…AVAILABILITY AND IMPLEMENTATION: SAPP is written in JAVA and freely available at https://gitlab.com/sapp and runs on Unix-like operating systems. The documentation, examples and a tutorial are available at https://sapp.gitlab.io.…”
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    SAPP: functional genome annotation and analysis through a semantic framework using FAIR principles
  19. 459
    “…AVAILABILITY AND IMPLEMENTATION: ViCTree is open-source and can be run on any Linux- or Unix-based computer or cluster. A tutorial, the documentation and the source code are available under a GPL3 license, and can be accessed at http://bioinformatics.cvr.ac.uk/victree_web/. …”
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    ViCTree: an automated framework for taxonomic classification from protein sequences
  20. 460
    “…CONCLUSIONS: Fluidigm2PURC is freely available for Unix‐like operating systems on GitHub (https://github.com/pblischak/fluidigm2purc) and for all operating systems through Docker (https://hub.docker.com/r/pblischak/fluidigm2purc).…”
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    Fluidigm2PURC: Automated processing and haplotype inference for double‐barcoded PCR amplicons
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