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2“…BACKGROUND: Increasingly large amounts of DNA sequencing data are being generated within the Wellcome Trust Sanger Institute (WTSI). The traditional file system struggles to handle these increasing amounts of sequence data. …”
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3por Ayadi, Abdel, Birling, Marie-Christine, Bottomley, Joanna, Bussell, James, Fuchs, Helmut, Fray, Martin, Gailus-Durner, Valérie, Greenaway, Simon, Houghton, Richard, Karp, Natasha, Leblanc, Sophie, Lengger, Christoph, Maier, Holger, Mallon, Ann-Marie, Marschall, Susan, Melvin, David, Morgan, Hugh, Pavlovic, Guillaume, Ryder, Ed, Skarnes, William C., Selloum, Mohammed, Ramirez-Solis, Ramiro, Sorg, Tania, Teboul, Lydia, Vasseur, Laurent, Walling, Alison, Weaver, Tom, Wells, Sara, White, Jacqui K., Bradley, Allan, Adams, David J., Steel, Karen P., Hrabě de Angelis, Martin, Brown, Steve D., Herault, Yann“…Two large-scale phenotyping efforts, the European Mouse Disease Clinic (EUMODIC) and the Wellcome Trust Sanger Institute Mouse Genetics Project (SANGER-MGP), started during the late 2000s with the aim to deliver a comprehensive assessment of phenotypes or to screen for robust indicators of diseases in mouse mutants. …”
Publicado 2012
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4Publicado 2002“…Hewlett-Packard has installed a supercomputer system valued at more than $22 million at the Wellcome Trust Sanger Institute (WTSI) in the U.K. HP has also joined the CERN openlab for DataGrid applications (1 page).…”
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5“…A report on the 'Genomic Disorders 2011 - The Genomics of Rare Diseases' meeting, Wellcome Trust Sanger Institute, Hinxton, UK, 23-26 March 2011…”
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6por Bradbury, Jane“…The Wellcome Trust Sanger Institute and Epigenomics AG recently announced the launch of the Human Epigenome Project - a 5-year project to map the sites of DNA methylation throughout the human genome…”
Publicado 2003
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7“…The Wellcome Trust Sanger Institute has a strong reputation for prepublication data sharing as a result of its policy of rapid release of genome sequence data and particularly through its contribution to the Human Genome Project. …”
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8por Doyle, Maria A, MacRae, James I, De Souza, David P, Saunders, Eleanor C, McConville, Malcolm J, Likić, Vladimir A“…All genes in LeishCyc are linked to the corresponding entry in GeneDB (Wellcome Trust Sanger Institute). CONCLUSION: The LeishCyc database describes Leishmania major genes, gene products, metabolites, their relationships and biochemical organization into metabolic pathways. …”
Publicado 2009
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9por Ahmed, S.“…Key participants include the Wellcome Trust Sanger Institute, EMB-EBI (EMBL-European Bioinformatics Institute), Open Targets and Elixir. …”
Publicado 2017
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10por Wilming, L. G., Gilbert, J. G. R., Howe, K., Trevanion, S., Hubbard, T., Harrow, J. L.“…The Vertebrate Genome Annotation (Vega) database (http://vega.sanger.ac.uk) was first made public in 2004 and has been designed to view manual annotation of human, mouse and zebrafish genomic sequences produced at the Wellcome Trust Sanger Institute. Since its initial release, the number of human annotated loci has more than doubled to close to 33 000 and now contains comprehensive annotation on 20 of the 24 human chromosomes, four whole mouse chromosomes and around 40% of the zebrafish Danio rerio genome. …”
Publicado 2008
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11“…Availability: DNAPlotter is freely available (under a GPL licence) for download (for MacOSX, UNIX and Windows) at the Wellcome Trust Sanger Institute web sites: http://www.sanger.ac.uk/Software/Artemis/circular/ Contact: artemis@sanger.ac.uk…”
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12“…Annotation tools that have been developed at the Wellcome Trust Sanger Institute (WTSI, http://www.sanger.ac.uk/.) are being used to fill that gap, as they can be used remotely and so open up viable community annotation collaborations. …”
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13“…Bill Skarnes is a Professor at Wellcome Trust Sanger Institute, United Kingdom.…”
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14“…The zebrafish genome has recently been sequenced, the Zebrafish Mutation Project (launched by the Wellcome Trust Sanger Institute) has published the results of its first large-scale ethylnitrosourea (ENU) mutagenesis screen, and a host of new techniques, such as the genome editing technologies TALEN and CRISPR-Cas, are enabling specific mutations to be created in model organisms and investigated in vivo. …”
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15por Carver, Tim, Harris, Simon R., Berriman, Matthew, Parkhill, Julian, McQuillan, Jacqueline A.“…Availability: Artemis is freely available (under a GPL licence) for download (for MacOSX, UNIX and Windows) at the Wellcome Trust Sanger Institute websites: http://www.sanger.ac.uk/resources/software/artemis/. …”
Publicado 2012
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16por Goodwin, Nicola, Karp, Natasha A., Blackledge, Samuel, Clark, Bradley, Keeble, Rosemary, Kovacs, Ceri, Murray, Katrina N., Price, Michael, Thompson, Peter, Bussell, James“…A Collaboration between the Wellcome Trust Sanger Institute and Cambridge University (Department of Medicine-Laboratory of Molecular Biology) has led to the creation of the zebrafish welfare terms from which standardization of terminology can be achieved.…”
Publicado 2016
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17“…Informative SNPs were selected from the public SNP database at the Wellcome Trust Sanger Institute by comparing sequence data from C57BL/6NJ and C57BL/6J mice. …”
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18por Hodgkins, Alex, Farne, Anna, Perera, Sajith, Grego, Tiago, Parry-Smith, David J., Skarnes, William C., Iyer, Vivek“…Here we describe the Wellcome Trust Sanger Institute Genome Editing database (WGE), which uses novel methods to compute, visualize and select optimal CRISPR sites in a genome browser environment. …”
Publicado 2015
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19por Karp, Natasha A., Heller, Ruth, Yaacoby, Shay, White, Jacqueline K., Benjamini, Yoav“…A motivating case study utilizing a large scale high-throughput mouse phenotyping data set from the Wellcome Trust Sanger Institute Mouse Genetics Project, where the treatment is a gene ablation, demonstrates the benefits of the new pipeline on the downstream biological calls.…”
Publicado 2017
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20por Logan-Klumpler, Flora J., De Silva, Nishadi, Boehme, Ulrike, Rogers, Matthew B., Velarde, Giles, McQuillan, Jacqueline A., Carver, Tim, Aslett, Martin, Olsen, Christian, Subramanian, Sandhya, Phan, Isabelle, Farris, Carol, Mitra, Siddhartha, Ramasamy, Gowthaman, Wang, Haiming, Tivey, Adrian, Jackson, Andrew, Houston, Robin, Parkhill, Julian, Holden, Matthew, Harb, Omar S., Brunk, Brian P., Myler, Peter J., Roos, David, Carrington, Mark, Smith, Deborah F., Hertz-Fowler, Christiane, Berriman, Matthew“…The resource provides a portal to genome sequence and annotation data, which is primarily generated by the Pathogen Genomics group at the Wellcome Trust Sanger Institute. It combines data from completed and ongoing genome projects with curated annotation, which is readily accessible from a web based resource. …”
Publicado 2012
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