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1av Zhang, Guo-Qiang, Liu, Ke-Wei, Li, Zhen, Lohaus, Rolf, Hsiao, Yu-Yun, Niu, Shan-Ce, Wang, Jie-Yu, Lin, Yao-Cheng, Xu, Qing, Chen, Li-Jun, Yoshida, Kouki, Fujiwara, Sumire, Wang, Zhi-Wen, Zhang, Yong-Qiang, Mitsuda, Nobutaka, Wang, Meina, Liu, Guo-Hui, Pecoraro, Lorenzo, Huang, Hui-Xia, Xiao, Xin-Ju, Lin, Min, Wu, Xin-Yi, Wu, Wan-Lin, Chen, You-Yi, Chang, Song-Bin, Sakamoto, Shingo, Ohme-Takagi, Masaru, Yagi, Masafumi, Zeng, Si-Jin, Shen, Ching-Yu, Yeh, Chuan-Ming, Luo, Yi-Bo, Tsai, Wen-Chieh, Van de Peer, Yves, Liu, Zhong-Jian“…Here we report the draft genome sequence of Apostasia shenzhenica(4), a representative of one of two genera that form a sister lineage to the rest of the Orchidaceae, providing a reference for inferring the genome content and structure of the most recent common ancestor of all extant orchids and improving our understanding of their origins and evolution. …”
Publicerad 2017
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2av Zhang, Guo-Qiang, Liu, Ke-Wei, Li, Zhen, Lohaus, Rolf, Hsiao, Yu-Yun, Niu, Shan-Ce, Wang, Jie-Yu, Lin, Yao-Cheng, Xu, Qing, Chen, Li-Jun, Yoshida, Kouki, Fujiwara, Sumire, Wang, Zhi-Wen, Zhang, Yong-Qiang, Mitsuda, Nobutaka, Wang, Meina, Liu, Guo-Hui, Pecoraro, Lorenzo, Huang, Hui-Xia, Xiao, Xin-Ju, Lin, Min, Wu, Xin-Yi, Wu, Wan-Lin, Chen, You-Yi, Chang, Song-Bin, Sakamoto, Shingo, Ohme-Takagi, Masaru, Yagi, Masafumi, Zeng, Si-Jin, Shen, Ching-Yu, Yeh, Chuan-Ming, Luo, Yi-Bo, Tsai, Wen-Chieh, Van de Peer, Yves, Liu, Zhong-JianHämta fulltext
Publicerad 2020
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3av Ke, Shi-Jie, Liu, Ding-Kun, Tu, Xiong-De, He, Xin, Zhang, Meng-Meng, Zhu, Meng-Jia, Zhang, Di-Yang, Zhang, Cui-Li, Lan, Si-Ren, Liu, Zhong-Jian“…Apostasia shenzhenica belongs to the subfamily Apostasioideae and is a primitive group located at the base of the Orchidaceae phylogenetic tree. …”
Publicerad 2023
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4“…Apostasia ramifera S. C. Chen & K. Y. Lang 1986 is a Chinese endemic and endangered orchid. …”
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5av Zhang, Weixiong, Zhang, Guoqiang, Zeng, Peng, Zhang, Yongqiang, Hu, Hao, Liu, Zhongjian, Cai, Jing“…RESULTS: Here, we present a genome sequence of Apostasia ramifera, a terrestrial orchid species from the Apostasioideae subfamily. …”
Publicerad 2021
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6av Suetsugu, Kenji“…Orthopterans are rarely considered seed dispersers, but the gross fruit morphology and pigmentation patterns of some Apostasia species parallel those seen in A. nipponica, suggesting that similar seed dispersal systems could be widespread among Apostasia species. …”
Publicerad 2020
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7av Niu, Zhitao, Pan, Jiajia, Zhu, Shuying, Li, Ludan, Xue, Qingyun, Liu, Wei, Ding, Xiaoyu“…Apostasioideae, consists of only two genera, Apostasia and Neuwiedia, which are mainly distributed in Southeast Asia and northern Australia. …”
Publicerad 2017
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9av Liu, Yang, Wang, Qin, Abbas, Farhat, Zhou, Yiwei, He, Jingjuan, Fan, Yanping, Yu, Rangcai“…The LoCOP1 protein was found to be the most similar to Apostasia shenzhenica COP1. LoCOP1 was found to be an important factor located in the nucleus and played a negative regulatory role in floral scent production and emission using the virus-induced gene silencing (VIGS) approach. …”
Publicerad 2023
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10av Niu, Shan-Ce, Huang, Jie, Zhang, Yong-Qiang, Li, Pei-Xing, Zhang, Guo-Qiang, Xu, Qing, Chen, Li-Jun, Wang, Jie-Yu, Luo, Yi-Bo, Liu, Zhong-Jian“…Then, the S-RNase- and SLF-interacting SKP1-like1 (SSK1)-like genes present in their transcriptomes and the genomes of Phalaenopsis equestris, D. catenatum, Vanilla shenzhenica, and Apostasia shenzhenica were investigated. Sequence, phylogenetic, and tissue-specific expression analyses revealed that none of the genes identified was an S-determinant, suggesting that Orchidaceae might have a novel SI mechanism. …”
Publicerad 2017
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11av Xue, Jia-Yu, Zhao, Tao, Liu, Yang, Liu, Yang, Zhang, Yong-Xia, Zhang, Guo-Qiang, Chen, Hongfeng, Zhou, Guang-Can, Zhang, Shou-Zhou, Shao, Zhu-Qing“…Due to recent sharp expansions, Phalaenopsis equestris and Dendrobium catenatum having 52 and 115 genes, respectively, and exhibited an “early shrinking to recent expanding” evolutionary pattern, while Gastrodia elata and Apostasia shenzhenica both exhibit a “consistently shrinking” evolutionary pattern and have retained only five and 14 NBS-LRR genes, respectively. …”
Publicerad 2020
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12“…In this study, we investigated the relationships among SUTs in 24 representative plant species and performed an analysis of SUT genes in three sequenced Orchidaceae species: Dendrobium officinale, Phalaenopsis equestris, and Apostasia shenzhenica. All the SUTs from the 24 plant species were classified into three groups and five subgroups, subgroups A, B1, B2.1, B2.2, and C, based on their evolutionary relationships. …”
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13av Hsiao, Yu-Yun, Fu, Chih-Hsiung, Ho, Sau-Yee, Li, Chung-I, Chen, You-Yi, Wu, Wan-Lin, Wang, Jeen-Shing, Zhang, Di-Yang, Hu, Wen-Qi, Yu, Xia, Sun, Wei-Hong, Zhou, Zhuang, Liu, Ke-Wei, Huang, Laiqiang, Lan, Si-Ren, Chen, Hong-Hwa, Wu, Wei-Sheng, Liu, Zhong-Jian, Tsai, Wen-Chieh“…DESCRIPTION: Recently, the whole-genome sequences of Apostasia shenzhenica, Dendrobium catenatum, and Phalaenopsis equestris were de novo assembled and analyzed. …”
Publicerad 2021
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14“…RESULTS: In the present report, we identified and characterized PLC genes in the genomes of three orchids, Phalaenopsis equestris (seven PePLCs), Dendrobium catenatum (eight DcPLCs), and Apostasia shenzhenica (seven AsPLCs). Multiple sequence alignment analysis confirmed the presence of conserved X and Y catalytic domains, calcium/lipid-binding domain (C2 domain) at the C terminal region, and EF-hand at the N-terminal region in PI-PLC proteins and esterase domain in PC-PLC. …”
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15av Wang, Yunzhu, Zhao, Kunkun, Chen, Yue, Wei, Qingzhen, Chen, Xiaoyang, Wan, Hongjian, Sun, Chongbo“…In the present study, we identified and systematically analyzed the CesA/Csl family members in three fully sequenced Orchidaceae species, i.e., Dendrobium officinale, Phalaenopsis equestris, and Apostasia shenzhenica. A total of 125 Cellulose synthase superfamily genes were identified in the three orchid species and classified into one CesA family and six Csl families: CslA, CslC, CslD, CslE, CslG, and CslH according to phylogenetic analysis involving nine representative plant species. …”
Publicerad 2022
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16av Chen, You-Yi, Li, Chung‐I, Hsiao, Yu-Yun, Ho, Sau-Yee, Zhang, Zhe-Bin, Liao, Chien-Chi, Lee, Bing-Ru, Lin, Shao-Ting, Wu, Wan-Lin, Wang, Jeen-Shing, Zhang, Diyang, Liu, Ke-Wei, Liu, Ding-Kun, Zhao, Xue-Wei, Li, Yuan-Yuan, Ke, Shi-Jie, Zhou, Zhuang, Huang, Ming-Zhong, Wu, Yong-Shu, Peng, Dong-Hui, Lan, Si-Ren, Chen, Hong-Hwa, Liu, Zhong-Jian, Wu, Wei-Sheng, Tsai, Wen-Chieh“…Previously, we collected genome and transcriptome information of Dendrobium catenatum, Phalaenopsis equestris, and Apostasia shenzhenica which belong to two different subfamilies of Orchidaceae, and developed user-friendly tools to explore the orchid genetic sequences in the OrchidBase 4.0. …”
Publicerad 2022
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17av Li, Cong, Shen, Qiuyi, Cai, Xiang, Lai, Danni, Wu, Lingshang, Han, Zhigang, Zhao, Tianlun, Chen, Donghong, Si, Jinping“…Subsequently, systematic analyses containing phylogenetic relationship, gene structure, protein domain, and motif architecture of core JA pathway proteins were conducted in D. catenatum and the newly characterized homologs from its closely related orchid species Phalaenopsis equestris and Apostasia shenzhenica, along with the well-investigated homologs from Arabidopsis thaliana and Oryza sativa. …”
Publicerad 2021
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