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2501“…Unlike most frogs, the coquí frog skips the tadpole stage, which makes it of interest to developmental biologists. The frog is best known in Puerto Rico for its notoriously loud mating call, which has allowed researchers to study aspects of social behavior such as vocal communication and courtship, while the ability of coquí to colonize new habitats has been used to explore the biology of invasive species. …”
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2502por Chen, Wen, Li, Jing, Huang, Shulan, Li, Xiaodeng, Zhang, Xuan, Hu, Xiang, Xiang, Shuanglin, Liu, Changning“…However, there is a lack of effective cross-platform analysis tools. For biologists to easily build a gene co-expression network and to predict gene function, we developed GCEN, a cross-platform command-line toolkit developed with C++. …”
Publicado 2022
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2503por Barratt, Kristen S., Dai, Yichen, Miller, Darla R., Gunn, Teresa M., Siracusa, Linda D.“…A diverse attendance of pre-doctoral and post-doctoral trainees, young investigators, established researchers, clinicians, bioinformaticians, and computational biologists enjoyed a rich scientific program selected from 88 abstracts in the fields of cancer, conservation genetics, developmental biology, epigenetics, human disease modeling, immunology, infectious diseases, systems genetics, translational biology, and technological advances.…”
Publicado 2023
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2504“…This book will be of interest to quantitatively inclined undergraduate biologists, biophysicists and bioengineers and in addition through its focus on techniques actually used by biologists, the authors hope this text will help shape curricula in biomathematics education going forward. …”
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2505por Di Cara, Alessandro, Garg, Abhishek, De Micheli, Giovanni, Xenarios, Ioannis, Mendoza, Luis“…BACKGROUND: The ambition of most molecular biologists is the understanding of the intricate network of molecular interactions that control biological systems. …”
Publicado 2007
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2506“…BACKGROUND: Comparing patterns of divergence among separate lineages or groups has posed an especially difficult challenge for biologists. Recently a new, conceptually simple methodology called the “ordered-axis plot” approach was introduced for the purpose of comparing patterns of diversity in a common morphospace. …”
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2507por Baran, Joachim, Gerner, Martin, Haeussler, Maximilian, Nenadic, Goran, Bergman, Casey M.“…Despite the fact that genome sequence data and publications are two of the most heavily relied-upon sources of information for many biologists, very little effort has been made to systematically integrate data from genomic sequences directly with the biological literature. …”
Publicado 2011
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2508“…In this context, computational biologists can increase reproducibility of their ChIP-Seq data analyses while saving time for downstream analyses. …”
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2509“…In many cases, the desired information of a query asked by biologists is a list of a certain type of entities covering different aspects that are related to the question, such as cells, genes, diseases, proteins, mutations, etc. …”
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2510“…BACKGROUND: High throughput screening technologies enable biologists to generate candidate genes at a rate that, due to time and cost constraints, cannot be studied by experimental approaches in the laboratory. …”
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2511“…BACKGROUND: Biologists often need to assess whether unfamiliar datasets warrant the time investment required for more detailed exploration. …”
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2512“…Text mining can assist biologists and curators to locate and access this knowledge, for instance by characterizing the functional profile of publications. …”
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2513por Abelson, Sagi“…However, many times, less consideration has been given to the fact that an extensive and effective interpretation requires close interplay between the bioinformaticians who analyze the data and the biologists who generate it. To bridge this gap and to simplify the usability of such tools we developed Eureka-DMA — an easy-to-operate graphical user interface that allows bioinformaticians and bench-biologists alike to initiate analyses as well as to investigate the data produced by DNA microarrays. …”
Publicado 2014
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2514por Chandrani, P, Kulkarni, V, Iyer, P, Upadhyay, P, Chaubal, R, Das, P, Mulherkar, R, Singh, R, Dutt, A“…Here, we describe the first graphic user interface (GUI)-based automated tool ‘HPVDetector', for non-computational biologists, exclusively for detection and annotation of the HPV genome based on next-generation sequencing data sets. …”
Publicado 2015
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2515por Henry, Vincent J., Goelzer, Anne, Ferré, Arnaud, Fischer, Stephan, Dinh, Marc, Loux, Valentin, Froidevaux, Christine, Fromion, Vincent“…Altogether, BiPON opens up promising perspectives for knowledge integration and sharing and can be used by biologists, systems and computational biologists, and the emerging community of whole-cell modeling. …”
Publicado 2017
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2516“…Our findings underline the importance and potential of direct interactions between conservation biologists and landowners. These two forms of non-traditional outreach administered by biologists could be a worthwhile component of future conservation program evaluations on private lands.…”
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2517por Shapshak, Paul“…Astronomers and astro-biologists infer that the presence of methane supports the possibility of the presence of at least microbial life. …”
Publicado 2018
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2518iDEP: an integrated web application for differential expression and pathway analysis of RNA-Seq data“…BACKGROUND: RNA-seq is widely used for transcriptomic profiling, but the bioinformatics analysis of resultant data can be time-consuming and challenging, especially for biologists. We aim to streamline the bioinformatic analyses of gene-level data by developing a user-friendly, interactive web application for exploratory data analysis, differential expression, and pathway analysis. …”
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2519“…Despite the availability of databases such as the Cancer Cell Line Encyclopedia (CCLE), the Cancer Therapeutics Response Portal (CTRP), and The Cancer Genome Atlas (TCGA), it is still challenging for biologists to explore the relationship between drug response and underlying genomic features due to the heterogeneity of the data. …”
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2520“…Learning about identifying biodiversity is a central task for future biologists and biology teachers and universities play an important role in educating future experts and multipliers. …”
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