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  1. 561
    “…However, the most crucial step in our pipeline relies on software-assisted curation by an expert biologist. This curation tool, Phylogenetic Annotation and INference Tool (PAINT) helps curators to infer annotations among members of a protein family. …”
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    Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
  2. 562
    “…This curriculum is intended to be taught by a computational biologist who has worked with a high school advanced biology teacher to adapt the unit for his/her classroom, but a motivated high school teacher comfortable with mathematics and computing may be able to teach this alone. …”
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    A First Attempt to Bring Computational Biology into Advanced High School Biology Classrooms
  3. 563
    “…Most medical schools have geneticists who understand evolution, but few have even one evolutionary biologist to suggest other possible applications. The canyon between evolutionary biology and medicine is wide. …”
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    The great opportunity: Evolutionary applications to medicine and public health
  4. 564
    “…BACKGROUND: Based on available biological information, genomic data can often be partitioned into pre-defined sets (e.g. pathways) and subsets within sets. Biologists are often interested in determining whether some pre-defined sets of variables (e.g. genes) are differentially expressed under varying experimental conditions. …”
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    Analysis of high dimensional data using pre-defined set and subset information, with applications to genomic data
  5. 565
    “…On the basis of the PePPER output, biologist can design experiments to further verify the existence and extent of the proposed regulons. …”
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    PePPER: a webserver for prediction of prokaryote promoter elements and regulons
  6. 566
    “…A simple application programming interface (API) in a scripting language aimed at the biologist was however not yet available. Here, we present the Ruby UCSC API, a library to access the UCSC genome database using Ruby. …”
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    The Ruby UCSC API: accessing the UCSC genome database using Ruby
  7. 567
    “…For example, being able to look at very large DNA sequences while immediately identifying potentially interesting regions would provide the biologist with a flexible exploratory and analytical tool. …”
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    DNA Sequences at a Glance
  8. 568
    “…Then, the blood samples were taken after 12-14 hours of fast by a biologist for measuring cardiovascular risk factors and body iron stores, including serum ferritin, serum iron, and total iron binding capacity (TIBC). …”
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    The relation between body iron store and ferritin, and coronary artery disease
  9. 569
    “…BACKGROUND: Existing de novo software platforms have largely overlooked a valuable resource, the expertise of the intended biologist users. Typical data representations such as long gene lists, or highly dense and overlapping transcription factor networks often hinder biologists from relating these results to their expertise. …”
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    VISIONET: intuitive visualisation of overlapping transcription factor networks, with applications in cardiogenic gene discovery
  10. 570
    “…However, in the last three years several commercial implementations of LSFM became available, which are multipurpose and easy to use for any developmental biologist. This article is primarily directed to those researchers, who are not LSFM technology developers, but want to employ LSFM as a tool to answer specific developmental biology questions. …”
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    Using Light Sheet Fluorescence Microscopy to Image Zebrafish Eye Development
  11. 571
    “…We then tested our hypothesis by conducting a survey of 45 practitioners to determine how cluster heatmaps are used, prototyping alternatives to cluster heatmaps using pair analytics with a computational biologist, and evaluating those alternatives with hour-long interviews of 5 practitioners and an Amazon Mechanical Turk user study with approximately 200 participants. …”
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    Unboxing cluster heatmaps
  12. 572
    por Rubinstein, Ran, Simon, Itamar
    Publicado 2005
    “…BACKGROUND: High-throughput genomic research tools are becoming standard in the biologist's toolbox. After processing the genomic data with one of the many available statistical algorithms to identify statistically significant genes, these genes need to be further analyzed for biological significance in light of all the existing knowledge. …”
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    MILANO – custom annotation of microarray results using automatic literature searches
  13. 573
    “…With the increased availability of many imaging modalities and with automated data collection schemes, this poses an increased challenge for the modern experimental biologist to move from data to knowledge. This publication describes the use of SuRVoS Workbench, a program designed to address these issues by providing methods to semi-automatically segment complex biological volumetric data. …”
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    Volume Segmentation and Analysis of Biological Materials Using SuRVoS (Super-region Volume Segmentation) Workbench
  14. 574
    “…Significantly enhancing the SEQenv pipeline in the process, this information would be valuable to any biologist seeking to understand the various taxa present in the habitat and the environment they originated from, enabling a more thorough analysis of which lineages are abundant in certain habitats and the recovery of patterns in taxon distribution across different habitats and environmental gradients.…”
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    Extending SEQenv: a taxa-centric approach to environmental annotations of 16S rDNA sequences
  15. 575
    por Svensson, Erik I.
    Publicado 2017
    “…They have also motivated some biologists and philosophers to argue for an Extended Evolutionary Synthesis (EES). …”
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    On Reciprocal Causation in the Evolutionary Process
  16. 576
    “…Altogether, the technique and experimental procedures are becoming more straightforward and available to biologists from diverse fields, even without any profound experience in DNA sequencing. …”
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    NanoPipe—a web server for nanopore MinION sequencing data analysis
  17. 577
    “…We close with a call to action and encourage ecologists and biologist to embrace the challenge of better understanding rapid changes in seed dispersal and their consequences for the reaction of plant populations to global change.…”
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    Rapid changes in seed dispersal traits may modify plant responses to global change
  18. 578
    “…CONCLUSIONS: REIMS offers a completely novel method for the rapid analysis of faecal samples, extending faecal analysis (previously focused on DNA) to an assessment of phenotype, and has considerable potential as a new tool in the armamentarium of the field biologist. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1186/s12915-019-0686-9) contains supplementary material, which is available to authorized users.…”
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    Rapid identification of species, sex and maturity by mass spectrometric analysis of animal faeces
  19. 579
    “…In August 2012, a wildlife biologist became severely ill after becoming infected with a novel paramyxovirus, termed Sosuga virus. …”
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    Experimental infection of Egyptian rousette bats (Rousettus aegyptiacus) with Sosuga virus demonstrates potential transmission routes for a bat-borne human pathogenic paramyxovirus
  20. 580
    por Siekmann, Ivo
    Publicado 2018
    “…The theoretical biologist Robert Rosen developed a highly original approach for investigating the question “What is life?”…”
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    An applied mathematician's perspective on Rosennean Complexity
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