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141“…Being a reliable manually curated dataset, it also enables the benchmark for comparison of new models or models trained on automatically gathered peptide-oriented datasets. …”
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142por Cuzick, Alayne, Seager, James, Wood, Valerie, Urban, Martin, Rutherford, Kim, Hammond-Kosack, Kim E“…The framework provides a curation tool, phenotype ontology, and controlled vocabularies to curate pathogen–host interaction data, at the level of the host, pathogen, strain, gene, and genotype. …”
Publicado 2023
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143por Ali Uraiqat, Ahmad, Al Nsour, Dania, Mestareehy, Khaled Mohammad, Allababdeh, Mohammad Saleh, Naffa´, Mo´taz Fawzat, Alrabee, Muhanad Mohammad, Al-Hammouri, Firas“…INTRODUCTION: in patients with advanced primary or recurrent gynecologic, urologic, or rectal cancers without metastatic disease, extensive aggressive surgery such as pelvic exenteration may be necessary for curative intent treatment. This study aims to present the initial experience and clinical outcome of curative pelvic exenteration procedures for advanced or recurrent pelvic cancer in our center. …”
Publicado 2023
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144por Braun, Burkhard R, van het Hoog, Marco, d'Enfert, Christophe, Martchenko, Mikhail, Dungan, Jan, Kuo, Alan, Inglis, Diane O, Uhl, M. Andrew, Hogues, Hervé, Berriman, Matthew, Lorenz, Michael, Levitin, Anastasia, Oberholzer, Ursula, Bachewich, Catherine, Harcus, Doreen, Marcil, Anne, Dignard, Daniel, Iouk, Tatiana, Zito, Rosa, Frangeul, Lionel, Tekaia, Fredj, Rutherford, Kim, Wang, Edwin, Munro, Carol A, Bates, Steve, Gow, Neil A, Hoyer, Lois L, Köhler, Gerwald, Morschhäuser, Joachim, Newport, George, Znaidi, Sadri, Raymond, Martine, Turcotte, Bernard, Sherlock, Gavin, Costanzo, Maria, Ihmels, Jan, Berman, Judith, Sanglard, Dominique, Agabian, Nina, Mitchell, Aaron P, Johnson, Alexander D, Whiteway, Malcolm, Nantel, AndréEnlace del recurso
Publicado 2005
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145“…To efficiently annotate Brucella genes using the large amount of literature publications, a literature mining and curation system coined Limix is developed to integrate computational literature mining methods with a PubSearch-powered manual curation and management system. …”
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146“…Our hypothesis is that, were we to use a larger number of human experts to evaluate any given sentence, we could implement an artificial-intelligence curator that would perform the classification job at least as accurately as an average individual human evaluator. …”
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147por Goh, Chern-Sing, Gianoulis, Tara A, Liu, Yang, Li, Jianrong, Paccanaro, Alberto, Lussier, Yves A, Gerstein, Mark“…While there have been several studies that address this challenge, none have yet proposed a large-scale method integrating curated biological information. Here we utilize a systematic approach to discover genotype-phenotype associations that combines phenotypic information from a biomedical informatics database, GIDEON, with the molecular information contained in National Center for Biotechnology Information's Clusters of Orthologous Groups database (NCBI COGs). …”
Publicado 2006
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148por Kulkarni-Kale, Urmila, Bhosle, Shriram G, Manjari, G Sunitha, Joshi, Manali, Bansode, Sandeep, Kolaskar, Ashok S“…RESULTS: VirGen is a curated resource of viral genomes and their analyses. …”
Publicado 2006
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149por Karamanis, Nikiforos, Seal, Ruth, Lewin, Ian, McQuilton, Peter, Vlachos, Andreas, Gasperin, Caroline, Drysdale, Rachel, Briscoe, Ted“…BACKGROUND: Despite increasing interest in applying Natural Language Processing (NLP) to biomedical text, whether this technology can facilitate tasks such as database curation remains unclear. RESULTS: PaperBrowser is the first NLP-powered interface that was developed under a user-centered approach to improve the way in which FlyBase curators navigate an article. …”
Publicado 2008
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150“…Optimization of critical application parameters by investigating a larger number of patients may turn ESW into a non-invasive curative varicose treatment.…”
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152“…While the presented data represent a specialized curation task, our modeling approach is general; most data annotation studies could benefit from our methodology.…”
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155“…We also describe the current strategy for gene structure curation, and introduce the WormBase ‘curation tool’, which integrates different data sources in order to identify new and correct gene structures. …”
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156por Schaeffer, Mary L., Harper, Lisa C., Gardiner, Jack M., Andorf, Carson M., Campbell, Darwin A., Cannon, Ethalinda K.S., Sen, Taner Z., Lawrence, Carolyn J.“…MaizeGDB has transitioned from a focus on comprehensive curation of the literature, genetic maps and stocks to a paradigm that accommodates the recent release of a reference maize genome sequence, multiple diverse maize genomes and sequence-based gene expression data sets. …”
Publicado 2011
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157por Seshadri Sundararajan, Vijayaraghava, Gabere, Musa Nur, Pretorius, Ashley, Adam, Saleem, Christoffels, Alan, Lehväslaiho, Minna, Archer, John A. C., Bajic, Vladimir B.“…To that extent, we developed the Dragon Antimicrobial Peptide Database (DAMPD, http://apps.sanbi.ac.za/dampd) that contains 1232 manually curated AMPs. DAMPD is an update and a replacement of the ANTIMIC database. …”
Publicado 2012
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158por Alcántara, Rafael, Axelsen, Kristian B., Morgat, Anne, Belda, Eugeni, Coudert, Elisabeth, Bridge, Alan, Cao, Hong, de Matos, Paula, Ennis, Marcus, Turner, Steve, Owen, Gareth, Bougueleret, Lydie, Xenarios, Ioannis, Steinbeck, Christoph“…They are extensively manually curated with links to source literature and other public resources on metabolism including enzyme and pathway databases. …”
Publicado 2012
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159por Raju, Rajesh, Nanjappa, Vishalakshi, Balakrishnan, Lavanya, Radhakrishnan, Aneesha, Thomas, Joji Kurian, Sharma, Jyoti, Tian, Maozhen, Palapetta, Shyam Mohan, Subbannayya, Tejaswini, Sekhar, Nirujogi Raja, Muthusamy, Babylakshmi, Goel, Renu, Subbannayya, Yashwanth, Telikicherla, Deepthi, Bhattacharjee, Mitali, Pinto, Sneha M., Syed, Nazia, Srikanth, Manda Srinivas, Sathe, Gajanan J., Ahmad, Sartaj, Chavan, Sandip N., Sameer Kumar, Ghantasala S., Marimuthu, Arivusudar, Prasad, T. S. K., Harsha, H. C., Rahiman, B Abdul, Ohara, Osamu, Bader, Gary D., Sujatha Mohan, S., Schiemann, William P., Pandey, Akhilesh“…To overcome this potential limitation, we have developed a set of more stringent curation and inclusion criteria for pathway reactions to generate high-confidence signaling maps. …”
Publicado 2011
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160por Gautam, Ankur, Singh, Harinder, Tyagi, Atul, Chaudhary, Kumardeep, Kumar, Rahul, Kapoor, Pallavi, Raghava, G. P. S.“…CPPsite is a manually curated database of experimentally validated 843 CPPs. …”
Publicado 2012
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