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1061por Zanfardino, Mario, Franzese, Monica, Pane, Katia, Cavaliere, Carlo, Monti, Serena, Esposito, Giuseppina, Salvatore, Marco, Aiello, Marco“…Genomic and radiomic data integration, namely radiogenomics, can provide meaningful knowledge in cancer diagnosis, prognosis and treatment. …”
Publicado 2019
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1062“…Multi-omics data integration is widely used to understand the genetic architecture of disease. …”
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1063por Lu, Shan, Conn, Daniel J, Chen, Shuyang, Johnson, Kirby D, Bresnick, Emery H, Keleş, Sündüz“…Linear and non-linear dimensionality reduction for data integration became a foundational tool in inference from scRNA-seq data. …”
Publicado 2021
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1064por Lo, Yu-Chen, Keyes, Timothy J., Jager, Astraea, Sarno, Jolanda, Domizi, Pablo, Majeti, Ravindra, Sakamoto, Kathleen M., Lacayo, Norman, Mullighan, Charles G., Waters, Jeffrey, Sahaf, Bita, Bendall, Sean C., Davis, Kara L.“…However, challenges in batch normalization and data integration limit the comparison of datasets not intended to be analyzed together. …”
Publicado 2022
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1065por Zanti, Sharon, Berkowitz, Emily, Katz, Matthew, Nelson, Amy Hawn, Burnett, T.C., Culhane, Dennis, Zhou, Yixi“…A brief discussion of the U.S. data integration context and history is provided, followed by discussion of tangible recommendations for evaluators, examples of evaluations relying on integrated data, and a list of U.S. …”
Publicado 2022
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1066por Liu, Wei, Liao, Xu, Luo, Ziye, Yang, Yi, Lau, Mai Chan, Jiao, Yuling, Shi, Xingjie, Zhai, Weiwei, Ji, Hongkai, Yeong, Joe, Liu, Jin“…Although a variety of methods have been developed for data integration, most of them are for single-cell RNA-seq datasets without consideration of spatial information. …”
Publicado 2023
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1067“…It presents how Linked Data is used for web-scale data integration, information management and search. Special emphasis is given to the publication of Linked Data from relational databases as well as from real-time sensor data streams. …”
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1068“…As an example of the hybrid strategy for data integration, it combined the mediation and data warehousing approaches. …”
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1069“…However, fast and computationally inexpensive tools for standardization of cell-type annotation and data integration are still needed in order to increase research inclusivity. …”
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1070por De Donno, Carlo, Hediyeh-Zadeh, Soroor, Moinfar, Amir Ali, Wagenstetter, Marco, Zappia, Luke, Lotfollahi, Mohammad, Theis, Fabian J.“…We envision scPoli becoming an important tool for population-level single-cell data integration facilitating atlas use but also interpretation by means of multi-scale analyses.…”
Publicado 2023
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1071por Wang, Yuan, Thistlethwaite, William, Tadych, Alicja, Ruf-Zamojski, Frederique, Bernard, Daniel J, Cappuccio, Antonio, Zaslavsky, Elena, Chen, Xi, Sealfon, Stuart C., Troyanskaya, Olga G.“…To facilitate single cell multi-omics analysis and improve reproducibility, we present SPEEDI (Single-cell Pipeline for End to End Data Integration), a fully automated end-to-end framework for batch inference, data integration, and cell type labeling. …”
Publicado 2023
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1072por Subramanian, Sai Lakshmi, Kitchen, Robert R., Alexander, Roger, Carter, Bob S., Cheung, Kei-Hoi, Laurent, Louise C., Pico, Alexander, Roberts, Lewis R., Roth, Matthew E., Rozowsky, Joel S., Su, Andrew I., Gerstein, Mark B., Milosavljevic, Aleksandar“…We focus on the following three specific data integration tasks: (a) selection of samples from a virtual biorepository for exRNA profiling and for inclusion in the exRNA Atlas; (b) retrieval of a data slice from the exRNA Atlas for integrative analysis and (c) interpretation of exRNA analysis results in the context of pathways and networks. …”
Publicado 2015
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1073“…One of the major underlying challenges of data integration is curating data to adhere to controlled terminologies and/or ontologies. …”
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1074“…In these constructions, to achieve data integrality, the auditor first must authenticate the legality of PKC, which leads to a great burden for the auditor. …”
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1075por Lazareva, Tatyana E., Barbitoff, Yury A., Changalidis, Anton I., Tkachenko, Alexander A., Maksiutenko, Evgeniia M., Nasykhova, Yulia A., Glotov, Andrey S.“…We provide prominent examples of such data integration and discuss important caveats which have to be taken into account in trans-biobank research.…”
Publicado 2022
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1076por Zhang, Ziqi, Sun, Haoran, Mariappan, Ragunathan, Chen, Xi, Chen, Xinyu, Jain, Mika S., Efremova, Mirjana, Teichmann, Sarah A., Rajan, Vaibhav, Zhang, Xiuwei“…Single cell data integration methods aim to integrate cells across data batches and modalities, and data integration tasks can be categorized into horizontal, vertical, diagonal, and mosaic integration, where mosaic integration is the most general and challenging case with few methods developed. …”
Publicado 2023
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1077“…Chapters also describe how to generate links between datasets and explain the overall architecture of data integration systems based on Linked Data. A large part of the text is devoted to query processing in different setups. …”
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1078“…Data integration has been proven to provide valuable information. …”
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1079“…RESULTS: We present five processes for semantic data integration that, when applied collectively, solve seven key problems. …”
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1080por Griss, Johannes, Perez‐Riverol, Yasset, Hermjakob, Henning, Vizcaíno, Juan Antonio“…In this article we discuss the requirements to use data mining of published proteomics datasets to assist proteomics‐based biomarker discovery, the use of external data integration to solve the issue of inadequate small sample sizes and finally, we try to estimate the probability that new biomarkers will be identified through data mining alone.…”
Publicado 2015
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